RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 NUCB2P80303 420 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
SFSWAP-210ENST00000541286 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
SFSWAP-210ENST00000541286 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.36
SFSWAP-210ENST00000541286 NSFL1CQ9UNZ2 370 aaKnown RBP17.27■□□□□ 0.36
SFSWAP-210ENST00000541286 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
SFSWAP-210ENST00000541286 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
SFSWAP-210ENST00000541286 TJP1Q07157 1748 aa17.27■□□□□ 0.35
SFSWAP-210ENST00000541286 PDE1AP54750 535 aa17.26■□□□□ 0.35
SFSWAP-210ENST00000541286 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
SFSWAP-210ENST00000541286 SRCIN1Q9C0H9 1055 aa17.26■□□□□ 0.35
SFSWAP-210ENST00000541286 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
SFSWAP-210ENST00000541286 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
SFSWAP-210ENST00000541286 PTPRCP08575 1304 aa17.26■□□□□ 0.35
SFSWAP-210ENST00000541286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 GNAI2P04899 355 aa17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 EIF5P55010 431 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 WWC3Q9ULE0 1092 aa17.25■□□□□ 0.35
SFSWAP-210ENST00000541286 PTMSP20962 102 aa17.24■□□□□ 0.35
SFSWAP-210ENST00000541286 GDPD2Q9HCC8 539 aa17.24■□□□□ 0.35
SFSWAP-210ENST00000541286 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
SFSWAP-210ENST00000541286 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
SFSWAP-210ENST00000541286 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-210ENST00000541286 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 A0A087WZG4 1122 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 AK7Q96M32 723 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 LRRCC1Q9C099 1032 aa17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 PA2G4Q9UQ80 394 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-210ENST00000541286 PLBD2Q8NHP8 589 aa17.22■□□□□ 0.35
SFSWAP-210ENST00000541286 SUCLG2Q96I99 432 aa17.22■□□□□ 0.35
SFSWAP-210ENST00000541286 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
SFSWAP-210ENST00000541286 LMBRD1Q9NUN5 540 aa17.22■□□□□ 0.35
SFSWAP-210ENST00000541286 CHMP3Q9Y3E7 222 aa17.22■□□□□ 0.35
SFSWAP-210ENST00000541286 COL15A1P39059 1388 aa17.22■□□□□ 0.35
SFSWAP-210ENST00000541286 HCLS1P14317 486 aaPredicted RBP17.21■□□□□ 0.35
SFSWAP-210ENST00000541286 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
SFSWAP-210ENST00000541286 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
SFSWAP-210ENST00000541286 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
SFSWAP-210ENST00000541286 DDX58O95786 925 aaKnown RBP17.21■□□□□ 0.35
SFSWAP-210ENST00000541286 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
SFSWAP-210ENST00000541286 MX1P20591 662 aa17.21■□□□□ 0.34
SFSWAP-210ENST00000541286 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.34
SFSWAP-210ENST00000541286 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.34
SFSWAP-210ENST00000541286 GPT2Q8TD30 523 aa17.21■□□□□ 0.34
SFSWAP-210ENST00000541286 SIL1Q9H173 461 aa17.21■□□□□ 0.34
SFSWAP-210ENST00000541286 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 GCKRQ14397 625 aa17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 TEX13AQ9BXU3 409 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
SFSWAP-210ENST00000541286 MCCP23508 829 aa17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 BICC1Q9H694 974 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 FGD1P98174 961 aa17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 SUSD4Q5VX71 490 aa17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 TMEM63CQ9P1W3 806 aa17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 ZDHHC9Q9Y397 364 aa17.19■□□□□ 0.34
SFSWAP-210ENST00000541286 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
SFSWAP-210ENST00000541286 BBXQ8WY36 941 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-210ENST00000541286 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-210ENST00000541286 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
SFSWAP-210ENST00000541286 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-210ENST00000541286 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
SFSWAP-210ENST00000541286 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 GRM8O00222 908 aa17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 RFC4P35249 363 aa17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 COL23A1Q86Y22 540 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 CWC22Q9HCG8 908 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 TCIRG1Q13488 830 aa17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-210ENST00000541286 ZBTB22O15209 634 aa17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 PPP4R3BQ5MIZ7 849 aa17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 PPP1R42Q7Z4L9 355 aa17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 RPS6KA4O75676 772 aa17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 SMAP1Q8IYB5 467 aaPredicted RBP17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 MAP7D2Q96T17 732 aa17.16■□□□□ 0.34
SFSWAP-210ENST00000541286 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms