RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 AIDAQ96BJ3 306 aa31.24■■■□□ 2.59
LEMD3-203ENST00000541171 DBF4Q9UBU7 674 aaPredicted RBP31.23■■■□□ 2.59
LEMD3-203ENST00000541171 LAMB2P55268 1798 aa31.22■■■□□ 2.59
LEMD3-203ENST00000541171 RASSF10A6NK89 507 aa31.22■■■□□ 2.59
LEMD3-203ENST00000541171 ATP5J2-PTCD1G3V325 749 aa31.22■■■□□ 2.59
LEMD3-203ENST00000541171 DUSP27Q5VZP5 1158 aa31.22■■■□□ 2.59
LEMD3-203ENST00000541171 GPRC5DQ9NZD1 345 aa31.22■■■□□ 2.59
LEMD3-203ENST00000541171 HOXB7P09629 217 aa31.21■■■□□ 2.59
LEMD3-203ENST00000541171 CFAP44Q96MT7 982 aa31.21■■■□□ 2.59
LEMD3-203ENST00000541171 GMPSP49915 693 aaPredicted RBP31.2■■■□□ 2.59
LEMD3-203ENST00000541171 KIAA2012Q0VF49 1180 aa31.2■■■□□ 2.59
LEMD3-203ENST00000541171 FAM89AQ96GI7 184 aa31.2■■■□□ 2.59
LEMD3-203ENST00000541171 ADARB2Q9NS39 739 aaKnown RBP31.2■■■□□ 2.59
LEMD3-203ENST00000541171 TRAF5O00463 557 aa31.19■■■□□ 2.58
LEMD3-203ENST00000541171 RAD17O75943 681 aa31.19■■■□□ 2.58
LEMD3-203ENST00000541171 RTL5Q5HYW3 569 aaPredicted RBP31.19■■■□□ 2.58
LEMD3-203ENST00000541171 CIAPIN1Q6FI81 312 aa31.19■■■□□ 2.58
LEMD3-203ENST00000541171 ISCA1Q9BUE6 129 aa31.19■■■□□ 2.58
LEMD3-203ENST00000541171 MBIPQ9NS73 344 aa31.19■■■□□ 2.58
LEMD3-203ENST00000541171 HYPKQ9NX55 129 aa31.18■■■□□ 2.58
LEMD3-203ENST00000541171 WDR33Q9C0J8 1336 aaKnown RBP31.18■■■□□ 2.58
LEMD3-203ENST00000541171 CTCFP49711 727 aaPredicted RBP31.17■■■□□ 2.58
LEMD3-203ENST00000541171 PAXIP1Q6ZW49 1069 aaPredicted RBP31.17■■■□□ 2.58
LEMD3-203ENST00000541171 BCL2L13Q9BXK5 485 aa31.17■■■□□ 2.58
LEMD3-203ENST00000541171 WBP1LQ9NX94 342 aa31.17■■■□□ 2.58
LEMD3-203ENST00000541171 TAF1P21675 1872 aa31.16■■■□□ 2.58
LEMD3-203ENST00000541171 PRKRIP1Q9H875 184 aaPredicted RBP31.16■■■□□ 2.58
LEMD3-203ENST00000541171 TNIP1Q15025 636 aa31.15■■■□□ 2.58
LEMD3-203ENST00000541171 TMC4Q7Z404 712 aa31.15■■■□□ 2.58
LEMD3-203ENST00000541171 APAF1O14727 1248 aa31.14■■■□□ 2.58
LEMD3-203ENST00000541171 GRM1Q13255 1194 aa31.14■■■□□ 2.58
LEMD3-203ENST00000541171 CELF1Q92879 486 aaKnown RBP31.14■■■□□ 2.58
LEMD3-203ENST00000541171 PRDM10Q9NQV6 1147 aa31.14■■■□□ 2.58
LEMD3-203ENST00000541171 ELL2O00472 640 aaPredicted RBP31.13■■■□□ 2.57
LEMD3-203ENST00000541171 SF3B3Q15393 1217 aaKnown RBP31.13■■■□□ 2.57
LEMD3-203ENST00000541171 CST9Q5W186 159 aa31.13■■■□□ 2.57
LEMD3-203ENST00000541171 RIC3Q7Z5B4 369 aa31.13■■■□□ 2.57
LEMD3-203ENST00000541171 NSFL1CQ9UNZ2 370 aaKnown RBP31.13■■■□□ 2.57
LEMD3-203ENST00000541171 YDJCA8MPS7 323 aa31.12■■■□□ 2.57
LEMD3-203ENST00000541171 LBX1P52954 281 aa31.12■■■□□ 2.57
LEMD3-203ENST00000541171 ZNF853P0CG23 659 aa31.11■■■□□ 2.57
LEMD3-203ENST00000541171 IRS4O14654 1257 aaPredicted RBP31.1■■■□□ 2.57
LEMD3-203ENST00000541171 RIMBP2O15034 1052 aa31.1■■■□□ 2.57
LEMD3-203ENST00000541171 WASHC4Q2M389 1173 aa31.1■■■□□ 2.57
LEMD3-203ENST00000541171 CYP4F22Q6NT55 531 aa31.1■■■□□ 2.57
LEMD3-203ENST00000541171 CAPNS2Q96L46 248 aa31.1■■■□□ 2.57
LEMD3-203ENST00000541171 PHAXQ9H814 394 aaKnown RBP31.1■■■□□ 2.57
LEMD3-203ENST00000541171 DDX60Q8IY21 1712 aaKnown RBP31.1■■■□□ 2.57
LEMD3-203ENST00000541171 C6orf229H3BNL8 230 aa31.09■■■□□ 2.57
LEMD3-203ENST00000541171 MAP2K1Q02750 393 aaPredicted RBP31.09■■■□□ 2.57
LEMD3-203ENST00000541171 GOLGA2Q08379 1002 aa31.09■■■□□ 2.57
LEMD3-203ENST00000541171 GLIS2Q9BZE0 524 aaPredicted RBP31.09■■■□□ 2.57
LEMD3-203ENST00000541171 IFT57Q9NWB7 429 aa31.09■■■□□ 2.57
LEMD3-203ENST00000541171 CNOT7Q9UIV1 285 aaKnown RBP31.09■■■□□ 2.57
LEMD3-203ENST00000541171 SHTN1A0MZ66 631 aa31.08■■■□□ 2.57
LEMD3-203ENST00000541171 GNAI1P63096 354 aa31.08■■■□□ 2.57
LEMD3-203ENST00000541171 GPSM2P81274 684 aa31.08■■■□□ 2.57
LEMD3-203ENST00000541171 TRIM28Q13263 835 aaKnown RBP31.08■■■□□ 2.57
LEMD3-203ENST00000541171 CDHR2Q9BYE9 1310 aa31.07■■■□□ 2.56
LEMD3-203ENST00000541171 CELF2O95319 508 aaKnown RBP31.07■■■□□ 2.56
LEMD3-203ENST00000541171 ECE1P42892 770 aa31.07■■■□□ 2.56
LEMD3-203ENST00000541171 HIRAP54198 1017 aaPredicted RBP31.07■■■□□ 2.56
LEMD3-203ENST00000541171 TRPM4Q8TD43 1214 aa31.07■■■□□ 2.56
LEMD3-203ENST00000541171 DBNDD1Q9H9R9 158 aa31.07■■■□□ 2.56
LEMD3-203ENST00000541171 TLL2Q9Y6L7 1015 aa31.07■■■□□ 2.56
LEMD3-203ENST00000541171 DUOX1Q9NRD9 1551 aa31.07■■■□□ 2.56
LEMD3-203ENST00000541171 CALD1Q05682 793 aaKnown RBP31.06■■■□□ 2.56
LEMD3-203ENST00000541171 MYD88Q99836 296 aa31.06■■■□□ 2.56
LEMD3-203ENST00000541171 POLLQ9UGP5 575 aa31.06■■■□□ 2.56
LEMD3-203ENST00000541171 ZBTB12Q9Y330 459 aaPredicted RBP31.06■■■□□ 2.56
LEMD3-203ENST00000541171 H7C1D1 291 aa31.05■■■□□ 2.56
LEMD3-203ENST00000541171 HSPA8P11142 646 aaKnown RBP31.05■■■□□ 2.56
LEMD3-203ENST00000541171 GPR101Q96P66 508 aaPredicted RBP31.05■■■□□ 2.56
LEMD3-203ENST00000541171 ZNF408Q9H9D4 720 aa31.05■■■□□ 2.56
LEMD3-203ENST00000541171 RPS8P62241 208 aaKnown RBP31.04■■■□□ 2.56
LEMD3-203ENST00000541171 MICALL2Q8IY33 904 aa31.04■■■□□ 2.56
LEMD3-203ENST00000541171 PGAP2Q9UHJ9 254 aa31.04■■■□□ 2.56
LEMD3-203ENST00000541171 TRPM7Q96QT4 1865 aa31.04■■■□□ 2.56
LEMD3-203ENST00000541171 PSMD14O00487 310 aa31.03■■■□□ 2.56
LEMD3-203ENST00000541171 DOK7Q18PE1 504 aa31.03■■■□□ 2.56
LEMD3-203ENST00000541171 ZBTB38Q8NAP3 1195 aaPredicted RBP31.03■■■□□ 2.56
LEMD3-203ENST00000541171 C8orf58Q8NAV2 365 aa31.03■■■□□ 2.56
LEMD3-203ENST00000541171 LRRC37AA6NMS7 1700 aa31.03■■■□□ 2.56
LEMD3-203ENST00000541171 COL4A1P02462 1669 aa31.03■■■□□ 2.56
LEMD3-203ENST00000541171 ZC3H15Q8WU90 426 aaKnown RBP31.02■■■□□ 2.56
LEMD3-203ENST00000541171 JARID2Q92833 1246 aaPredicted RBP31.02■■■□□ 2.56
LEMD3-203ENST00000541171 EYA3Q99504 573 aa31.02■■■□□ 2.56
LEMD3-203ENST00000541171 SEC31BQ9NQW1 1179 aa31.02■■■□□ 2.56
LEMD3-203ENST00000541171 BEGAINQ9BUH8 593 aa31.01■■■□□ 2.55
LEMD3-203ENST00000541171 ECE2O60344 883 aa31■■■□□ 2.55
LEMD3-203ENST00000541171 CDC37L1Q7L3B6 337 aa31■■■□□ 2.55
LEMD3-203ENST00000541171 TBC1D16Q8TBP0 767 aa31■■■□□ 2.55
LEMD3-203ENST00000541171 KCNQ5Q9NR82 932 aa31■■■□□ 2.55
LEMD3-203ENST00000541171 AOC2O75106 756 aa30.99■■■□□ 2.55
LEMD3-203ENST00000541171 SAMD7Q7Z3H4 446 aa30.99■■■□□ 2.55
LEMD3-203ENST00000541171 SAPCD2Q86UD0 394 aa30.99■■■□□ 2.55
LEMD3-203ENST00000541171 CCDC85AQ96PX6 553 aaPredicted RBP30.99■■■□□ 2.55
LEMD3-203ENST00000541171 HSP90B1P14625 803 aaKnown RBP30.98■■■□□ 2.55
LEMD3-203ENST00000541171 USP48Q86UV5 1035 aa30.98■■■□□ 2.55
LEMD3-203ENST00000541171 DPF2Q92785 391 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms