RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 CCDC196A0A1B0GTZ2 297 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 PPP1R12AO14974 1030 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 SASH3O75995 380 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 GCP02774 474 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 CHRNA2Q15822 529 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 HSP90AB2PQ58FF8 381 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 IQUBQ8NA54 791 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 TMEM87AQ8NBN3 555 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 ZNF526Q8TF50 670 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 TTC21AQ8NDW8 1320 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 CUL4AQ13619 759 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 TTC22Q5TAA0 569 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 CWC27Q6UX04 472 aaKnown RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 CBX8Q9HC52 389 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 ITSN1Q15811 1721 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 NUTM2BA6NNL0 878 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 NUTM2EB1AL46 878 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 TYRO3Q06418 890 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 NUTM2AQ8IVF1 878 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 C16orf71Q8IYS4 520 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 MICALL1Q8N3F8 863 aa11.39□□□□□ -0.59
CLDN2-202ENST00000540876 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
CLDN2-202ENST00000540876 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 SCP2P22307 547 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 MCM2P49736 904 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 CORO7P57737 925 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 ANO6Q4KMQ2 910 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 PLA2G4DQ86XP0 818 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 PHF23Q9BUL5 403 aaPredicted RBP11.38□□□□□ -0.59
CLDN2-202ENST00000540876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLDN2-202ENST00000540876 MRVI1Q9Y6F6 885 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 TCHHQ07283 1943 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 HMOX1P09601 288 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
CLDN2-202ENST00000540876 SNW1Q13573 536 aaKnown RBP11.38□□□□□ -0.59
CLDN2-202ENST00000540876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
CLDN2-202ENST00000540876 CKAP2LQ8IYA6 745 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 CCAR2Q8N163 923 aaKnown RBP11.38□□□□□ -0.59
CLDN2-202ENST00000540876 UBXN6Q9BZV1 441 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 PXDNQ92626 1479 aa11.38□□□□□ -0.59
CLDN2-202ENST00000540876 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
CLDN2-202ENST00000540876 TBC1D8O95759 1140 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
CLDN2-202ENST00000540876 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 INTS4Q96HW7 963 aaKnown RBP11.37□□□□□ -0.59
CLDN2-202ENST00000540876 ZSCAN16Q9H4T2 348 aaPredicted RBP11.37□□□□□ -0.59
CLDN2-202ENST00000540876 PSD3Q9NYI0 1048 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.37□□□□□ -0.59
CLDN2-202ENST00000540876 AKAP12Q02952 1782 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 SDSP20132 328 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 AMPHP49418 695 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 EPC1Q9H2F5 836 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
CLDN2-202ENST00000540876 ELL2O00472 640 aaPredicted RBP11.36□□□□□ -0.59
CLDN2-202ENST00000540876 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
CLDN2-202ENST00000540876 HSPA1LP34931 641 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 MAP3K11Q16584 847 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 L2HGDHQ9H9P8 463 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 RBM28Q9NW13 759 aaKnown RBP11.36□□□□□ -0.59
CLDN2-202ENST00000540876 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 PIK3C2AO00443 1686 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 APBB1O00213 710 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 ERC2O15083 957 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 SKIDA1Q1XH10 827 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 VPS18Q9P253 973 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 ZBTB12Q9Y330 459 aaPredicted RBP11.36□□□□□ -0.59
CLDN2-202ENST00000540876 ELP1O95163 1332 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 NSD2O96028 1365 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 CT47B1P0C2W7 299 aaPredicted RBP11.36□□□□□ -0.59
CLDN2-202ENST00000540876 OTUD7AQ8TE49 926 aaPredicted RBP11.36□□□□□ -0.59
CLDN2-202ENST00000540876 PLEKHA4Q9H4M7 779 aa11.36□□□□□ -0.59
CLDN2-202ENST00000540876 RPAP1Q9BWH6 1393 aaPredicted RBP11.35□□□□□ -0.59
CLDN2-202ENST00000540876 NRKQ7Z2Y5 1582 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 ATP8B1O43520 1251 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 TPM1P09493 284 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 ZSCAN22P10073 491 aaPredicted RBP11.35□□□□□ -0.59
CLDN2-202ENST00000540876 MAP9Q49MG5 647 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 SIRT2Q8IXJ6 389 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 THUMPD2Q9BTF0 503 aaKnown RBP11.35□□□□□ -0.59
CLDN2-202ENST00000540876 UPF3BQ9BZI7 483 aaKnown RBP11.35□□□□□ -0.59
CLDN2-202ENST00000540876 NEMFO60524 1076 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 SMC2O95347 1197 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
CLDN2-202ENST00000540876 NUP62CLQ9H1M0 184 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
CLDN2-202ENST00000540876 H0YHG0 523 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 PRKAR2BP31323 418 aa11.34□□□□□ -0.59
CLDN2-202ENST00000540876 SARNPP82979 210 aaKnown RBP11.34□□□□□ -0.59
CLDN2-202ENST00000540876 GNL2Q13823 731 aaKnown RBP11.34□□□□□ -0.59
CLDN2-202ENST00000540876 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
CLDN2-202ENST00000540876 TADA2BQ86TJ2 420 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms