RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
LMO3-224ENST00000540848 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 ADCY9O60503 1353 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 KCNQ3O43525 872 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 REC8O95072 547 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 PDE1AP54750 535 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 MTX1Q13505 466 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 STAP2Q9UGK3 403 aa12.47□□□□□ -0.41
LMO3-224ENST00000540848 ABCA3Q99758 1704 aa12.46□□□□□ -0.41
LMO3-224ENST00000540848 RNF40O75150 1001 aa12.46□□□□□ -0.42
LMO3-224ENST00000540848 NFKBIBQ15653 356 aa12.46□□□□□ -0.42
LMO3-224ENST00000540848 DDX17Q92841 729 aaKnown RBP12.46□□□□□ -0.42
LMO3-224ENST00000540848 MTRQ99707 1265 aa12.46□□□□□ -0.42
LMO3-224ENST00000540848 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.42
LMO3-224ENST00000540848 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
LMO3-224ENST00000540848 TTC5Q8N0Z6 440 aa12.45□□□□□ -0.42
LMO3-224ENST00000540848 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
LMO3-224ENST00000540848 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
LMO3-224ENST00000540848 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
LMO3-224ENST00000540848 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
LMO3-224ENST00000540848 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
LMO3-224ENST00000540848 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
LMO3-224ENST00000540848 SDSP20132 328 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 MX1P20591 662 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 COL5A2P05997 1499 aaPredicted RBP12.44□□□□□ -0.42
LMO3-224ENST00000540848 UTYO14607 1347 aa12.44□□□□□ -0.42
LMO3-224ENST00000540848 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
LMO3-224ENST00000540848 RABEP1Q15276 862 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
LMO3-224ENST00000540848 PPP1R42Q7Z4L9 355 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
LMO3-224ENST00000540848 CABLES1Q8TDN4 633 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 FMNL2Q96PY5 1086 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 C5P01031 1676 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 CHRNA2Q15822 529 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 CARD10Q9BWT7 1032 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 C9orf78Q9NZ63 289 aaPredicted RBP12.43□□□□□ -0.42
LMO3-224ENST00000540848 CHMP5Q9NZZ3 219 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
LMO3-224ENST00000540848 ZNF335Q9H4Z2 1342 aaPredicted RBP12.42□□□□□ -0.42
LMO3-224ENST00000540848 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
LMO3-224ENST00000540848 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
LMO3-224ENST00000540848 ERC2O15083 957 aa12.42□□□□□ -0.42
LMO3-224ENST00000540848 CYP27B1O15528 508 aa12.42□□□□□ -0.42
LMO3-224ENST00000540848 CABP4P57796 275 aa12.42□□□□□ -0.42
LMO3-224ENST00000540848 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
LMO3-224ENST00000540848 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
LMO3-224ENST00000540848 APBB1O00213 710 aa12.41□□□□□ -0.42
LMO3-224ENST00000540848 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
LMO3-224ENST00000540848 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
LMO3-224ENST00000540848 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
LMO3-224ENST00000540848 COL15A1P39059 1388 aa12.41□□□□□ -0.42
LMO3-224ENST00000540848 GRM8O00222 908 aa12.4□□□□□ -0.42
LMO3-224ENST00000540848 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
LMO3-224ENST00000540848 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
LMO3-224ENST00000540848 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
LMO3-224ENST00000540848 KIF2CQ99661 725 aa12.4□□□□□ -0.42
LMO3-224ENST00000540848 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
LMO3-224ENST00000540848 IL2RBP14784 551 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 IL21Q9HBE4 155 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 TTC41PQ6P2S7 1318 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
LMO3-224ENST00000540848 MCCP23508 829 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
LMO3-224ENST00000540848 PROSER3Q2NL68 480 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 RBM26Q5T8P6 1007 aaKnown RBP12.39□□□□□ -0.43
LMO3-224ENST00000540848 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 SLF2Q8IX21 1173 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 GPATCH3Q96I76 525 aa12.39□□□□□ -0.43
LMO3-224ENST00000540848 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
LMO3-224ENST00000540848 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
LMO3-224ENST00000540848 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
LMO3-224ENST00000540848 ANXA1P04083 346 aa12.38□□□□□ -0.43
LMO3-224ENST00000540848 GLI3P10071 1580 aa12.37□□□□□ -0.43
LMO3-224ENST00000540848 ANAPC15P60006 121 aa12.37□□□□□ -0.43
LMO3-224ENST00000540848 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
LMO3-224ENST00000540848 AK9Q5TCS8 1911 aa12.36□□□□□ -0.43
LMO3-224ENST00000540848 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
LMO3-224ENST00000540848 PTMSP20962 102 aa12.36□□□□□ -0.43
LMO3-224ENST00000540848 OS9Q13438 667 aaPredicted RBP12.36□□□□□ -0.43
LMO3-224ENST00000540848 CLASRPQ8N2M8 674 aaKnown RBP12.36□□□□□ -0.43
LMO3-224ENST00000540848 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms