RNA–Protein interactions for RNA: ENST00000540490.5

LINC02411-201, Transcript of long intergenic non-protein coding RNA 2411, humanhuman

TSL 3

Gene LINC02411, Length 848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02411-201ENST00000540490 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
LINC02411-201ENST00000540490 GREM2Q9H772 168 aa11.93□□□□□ -0.5
LINC02411-201ENST00000540490 SEC31BQ9NQW1 1179 aa11.93□□□□□ -0.5
LINC02411-201ENST00000540490 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
LINC02411-201ENST00000540490 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 IGHDP01880 384 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 CSF1RP07333 972 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 MTX1Q13505 466 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 POLA2Q14181 598 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 CRY2Q49AN0 593 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 TTLL11Q8NHH1 800 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 ZNF594Q96JF6 807 aaPredicted RBP11.92□□□□□ -0.5
LINC02411-201ENST00000540490 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 PA2G4Q9UQ80 394 aaKnown RBP11.92□□□□□ -0.5
LINC02411-201ENST00000540490 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
LINC02411-201ENST00000540490 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.92□□□□□ -0.5
LINC02411-201ENST00000540490 PDE8AO60658 829 aa11.91□□□□□ -0.5
LINC02411-201ENST00000540490 CHRNA5P30532 468 aa11.91□□□□□ -0.5
LINC02411-201ENST00000540490 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
LINC02411-201ENST00000540490 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
LINC02411-201ENST00000540490 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
LINC02411-201ENST00000540490 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
LINC02411-201ENST00000540490 ST5P78524 1137 aa11.9□□□□□ -0.5
LINC02411-201ENST00000540490 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
LINC02411-201ENST00000540490 SLX4Q8IY92 1834 aa11.9□□□□□ -0.5
LINC02411-201ENST00000540490 RTL9Q8NET4 1388 aa11.9□□□□□ -0.5
LINC02411-201ENST00000540490 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 NPHP1O15259 732 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
LINC02411-201ENST00000540490 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
LINC02411-201ENST00000540490 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 NLGN2Q8NFZ4 835 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 SSH3Q8TE77 659 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 CELF1Q92879 486 aaKnown RBP11.89□□□□□ -0.51
LINC02411-201ENST00000540490 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
LINC02411-201ENST00000540490 CHMP3Q9Y3E7 222 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 UTRNP46939 3433 aa11.89□□□□□ -0.51
LINC02411-201ENST00000540490 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
LINC02411-201ENST00000540490 ITGA6P23229 1130 aa11.88□□□□□ -0.51
LINC02411-201ENST00000540490 POLD1P28340 1107 aa11.88□□□□□ -0.51
LINC02411-201ENST00000540490 OLFM4Q6UX06 510 aa11.88□□□□□ -0.51
LINC02411-201ENST00000540490 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
LINC02411-201ENST00000540490 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
LINC02411-201ENST00000540490 SNED1Q8TER0 1413 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 SRGNP10124 158 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 KCNA3P22001 575 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 LRRC24Q50LG9 513 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 NLRP3Q96P20 1036 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 SIL1Q9H173 461 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
LINC02411-201ENST00000540490 WTIPA6NIX2 430 aaPredicted RBP11.86□□□□□ -0.51
LINC02411-201ENST00000540490 DPEP1P16444 411 aa11.86□□□□□ -0.51
LINC02411-201ENST00000540490 HDAC1Q13547 482 aaPredicted RBP11.86□□□□□ -0.51
LINC02411-201ENST00000540490 CCDC152Q4G0S7 254 aa11.86□□□□□ -0.51
LINC02411-201ENST00000540490 ATG9AQ7Z3C6 839 aa11.86□□□□□ -0.51
LINC02411-201ENST00000540490 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
LINC02411-201ENST00000540490 A0A0G2JLW4 131 aa11.85□□□□□ -0.51
LINC02411-201ENST00000540490 SNAP23O00161 211 aa11.85□□□□□ -0.51
LINC02411-201ENST00000540490 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
LINC02411-201ENST00000540490 RPAP2Q8IXW5 612 aaPredicted RBP11.85□□□□□ -0.51
LINC02411-201ENST00000540490 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
LINC02411-201ENST00000540490 ARAP2Q8WZ64 1704 aa11.85□□□□□ -0.51
LINC02411-201ENST00000540490 SMARCA5O60264 1052 aaPredicted RBP11.84□□□□□ -0.51
LINC02411-201ENST00000540490 IFIT5Q13325 482 aaKnown RBP11.84□□□□□ -0.51
LINC02411-201ENST00000540490 AAMPQ13685 434 aa11.84□□□□□ -0.51
LINC02411-201ENST00000540490 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
LINC02411-201ENST00000540490 CHMP4BQ9H444 224 aaKnown RBP11.84□□□□□ -0.51
LINC02411-201ENST00000540490 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
LINC02411-201ENST00000540490 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
LINC02411-201ENST00000540490 ANKRD18BA2A2Z9 1011 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 APBB1O00213 710 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 SASH1O94885 1247 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 NPR1P16066 1061 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 PDE6BP35913 854 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 GRAPQ13588 217 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 VGLL2Q8N8G2 317 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
LINC02411-201ENST00000540490 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
LINC02411-201ENST00000540490 NOP58Q9Y2X3 529 aaKnown RBP11.83□□□□□ -0.52
LINC02411-201ENST00000540490 ZNF609O15014 1411 aa11.83□□□□□ -0.52
LINC02411-201ENST00000540490 EYA2O00167 538 aa11.82□□□□□ -0.52
LINC02411-201ENST00000540490 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
LINC02411-201ENST00000540490 KLRK1P26718 216 aa11.82□□□□□ -0.52
LINC02411-201ENST00000540490 ERICH6BQ5W0A0 696 aa11.82□□□□□ -0.52
LINC02411-201ENST00000540490 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
LINC02411-201ENST00000540490 DDX46Q7L014 1031 aaKnown RBP11.82□□□□□ -0.52
LINC02411-201ENST00000540490 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
LINC02411-201ENST00000540490 ZNF622Q969S3 477 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC02411-201ENST00000540490 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
LINC02411-201ENST00000540490 GPR101Q96P66 508 aaPredicted RBP11.82□□□□□ -0.52
LINC02411-201ENST00000540490 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
LINC02411-201ENST00000540490 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
LINC02411-201ENST00000540490 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
LINC02411-201ENST00000540490 COL4A5P29400 1685 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms