RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 PLIN1O60240 522 aa18.8■□□□□ 0.6
MDM1-210ENST00000540418 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
MDM1-210ENST00000540418 TTLL11Q8NHH1 800 aa18.8■□□□□ 0.6
MDM1-210ENST00000540418 DLEC1Q9Y238 1755 aa18.8■□□□□ 0.6
MDM1-210ENST00000540418 CSF1RP07333 972 aa18.79■□□□□ 0.6
MDM1-210ENST00000540418 RLBP1P12271 317 aa18.79■□□□□ 0.6
MDM1-210ENST00000540418 FOXO4P98177 505 aa18.79■□□□□ 0.6
MDM1-210ENST00000540418 GRIN3BO60391 1043 aa18.78■□□□□ 0.6
MDM1-210ENST00000540418 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
MDM1-210ENST00000540418 BBOX1O75936 387 aa18.77■□□□□ 0.6
MDM1-210ENST00000540418 LAMB2P55268 1798 aa18.77■□□□□ 0.6
MDM1-210ENST00000540418 BRCA1P38398 1863 aaKnown RBP18.77■□□□□ 0.6
MDM1-210ENST00000540418 GRAPQ13588 217 aa18.77■□□□□ 0.6
MDM1-210ENST00000540418 GRAPLQ8TC17 118 aaPredicted RBP18.77■□□□□ 0.6
MDM1-210ENST00000540418 PANK1Q8TE04 598 aa18.77■□□□□ 0.6
MDM1-210ENST00000540418 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
MDM1-210ENST00000540418 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
MDM1-210ENST00000540418 HDAC5Q9UQL6 1122 aa18.77■□□□□ 0.6
MDM1-210ENST00000540418 UBTFL1P0CB47 393 aaPredicted RBP18.76■□□□□ 0.59
MDM1-210ENST00000540418 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 C7orf43Q8WVR3 580 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 C21orf2O43822 256 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 GNAI3P08754 354 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 MEIS3Q99687 375 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 GREM2Q9H772 168 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 RTL9Q8NET4 1388 aa18.76■□□□□ 0.59
MDM1-210ENST00000540418 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
MDM1-210ENST00000540418 LMBR1LQ6UX01 489 aa18.75■□□□□ 0.59
MDM1-210ENST00000540418 ITPRIPQ8IWB1 547 aa18.75■□□□□ 0.59
MDM1-210ENST00000540418 SEC31BQ9NQW1 1179 aa18.75■□□□□ 0.59
MDM1-210ENST00000540418 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
MDM1-210ENST00000540418 PPEF1O14829 653 aaPredicted RBP18.74■□□□□ 0.59
MDM1-210ENST00000540418 RPS8P62241 208 aaKnown RBP18.74■□□□□ 0.59
MDM1-210ENST00000540418 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
MDM1-210ENST00000540418 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
MDM1-210ENST00000540418 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
MDM1-210ENST00000540418 GOLGB1Q14789 3259 aaKnown RBP18.73■□□□□ 0.59
MDM1-210ENST00000540418 ARHGAP27Q6ZUM4 889 aa18.73■□□□□ 0.59
MDM1-210ENST00000540418 TMC4Q7Z404 712 aa18.73■□□□□ 0.59
MDM1-210ENST00000540418 FAM161AQ3B820 660 aa18.73■□□□□ 0.59
MDM1-210ENST00000540418 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
MDM1-210ENST00000540418 CDC5LQ99459 802 aaKnown RBP18.73■□□□□ 0.59
MDM1-210ENST00000540418 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
MDM1-210ENST00000540418 ATP6V0A2Q9Y487 856 aa18.73■□□□□ 0.59
MDM1-210ENST00000540418 SLX4Q8IY92 1834 aa18.73■□□□□ 0.59
MDM1-210ENST00000540418 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
MDM1-210ENST00000540418 ITGA6P23229 1130 aa18.72■□□□□ 0.59
MDM1-210ENST00000540418 RRP1P56182 461 aaKnown RBP18.72■□□□□ 0.59
MDM1-210ENST00000540418 CC2D2BQ6DHV5 1058 aa18.72■□□□□ 0.59
MDM1-210ENST00000540418 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
MDM1-210ENST00000540418 IFIT5Q13325 482 aaKnown RBP18.72■□□□□ 0.59
MDM1-210ENST00000540418 ANKRD18AQ8IVF6 992 aa18.72■□□□□ 0.59
MDM1-210ENST00000540418 ANKRD44Q8N8A2 993 aa18.72■□□□□ 0.59
MDM1-210ENST00000540418 TMX4Q9H1E5 349 aaPredicted RBP18.72■□□□□ 0.59
MDM1-210ENST00000540418 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
MDM1-210ENST00000540418 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
MDM1-210ENST00000540418 C20orf194Q5TEA3 1177 aa18.71■□□□□ 0.59
MDM1-210ENST00000540418 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
MDM1-210ENST00000540418 CCDC57Q2TAC2 916 aa18.71■□□□□ 0.59
MDM1-210ENST00000540418 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
MDM1-210ENST00000540418 COG6Q9Y2V7 657 aa18.71■□□□□ 0.59
MDM1-210ENST00000540418 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
MDM1-210ENST00000540418 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
MDM1-210ENST00000540418 RTKN2Q8IZC4 609 aa18.7■□□□□ 0.58
MDM1-210ENST00000540418 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
MDM1-210ENST00000540418 GNAI2P04899 355 aa18.7■□□□□ 0.58
MDM1-210ENST00000540418 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
MDM1-210ENST00000540418 MYH3P11055 1940 aa18.69■□□□□ 0.58
MDM1-210ENST00000540418 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
MDM1-210ENST00000540418 IGHMBP2P38935 993 aaKnown RBP18.68■□□□□ 0.58
MDM1-210ENST00000540418 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
MDM1-210ENST00000540418 COL4A1P02462 1669 aa18.67■□□□□ 0.58
MDM1-210ENST00000540418 NFKBIEO00221 500 aa18.67■□□□□ 0.58
MDM1-210ENST00000540418 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
MDM1-210ENST00000540418 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
MDM1-210ENST00000540418 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
MDM1-210ENST00000540418 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
MDM1-210ENST00000540418 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
MDM1-210ENST00000540418 TAF1P21675 1872 aa18.66■□□□□ 0.58
MDM1-210ENST00000540418 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
MDM1-210ENST00000540418 FKBP4Q02790 459 aaKnown RBP eCLIP18.65■□□□□ 0.58
MDM1-210ENST00000540418 MPNDQ8N594 471 aa18.65■□□□□ 0.58
MDM1-210ENST00000540418 ZNF594Q96JF6 807 aaPredicted RBP18.65■□□□□ 0.58
MDM1-210ENST00000540418 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
MDM1-210ENST00000540418 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
MDM1-210ENST00000540418 PSMD1Q99460 953 aa18.65■□□□□ 0.58
MDM1-210ENST00000540418 MINPP1Q9UNW1 487 aa18.65■□□□□ 0.58
MDM1-210ENST00000540418 RASSF7Q02833 373 aa18.64■□□□□ 0.57
MDM1-210ENST00000540418 MTX1Q13505 466 aa18.64■□□□□ 0.57
MDM1-210ENST00000540418 DPP8Q6V1X1 898 aaPredicted RBP18.64■□□□□ 0.57
MDM1-210ENST00000540418 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
MDM1-210ENST00000540418 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
MDM1-210ENST00000540418 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
MDM1-210ENST00000540418 UTRNP46939 3433 aa18.64■□□□□ 0.57
MDM1-210ENST00000540418 RFX5P48382 616 aaPredicted RBP18.63■□□□□ 0.57
MDM1-210ENST00000540418 GPSM2P81274 684 aa18.63■□□□□ 0.57
MDM1-210ENST00000540418 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
MDM1-210ENST00000540418 C1orf115Q9H7X2 142 aa18.63■□□□□ 0.57
MDM1-210ENST00000540418 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
MDM1-210ENST00000540418 SUPT20HQ8NEM7 779 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 247.8 ms