RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 CST9Q5W186 159 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 TMC4Q7Z404 712 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
COPS7A-211ENST00000540408 LTBP1Q14766 1721 aa16.31■□□□□ 0.2
COPS7A-211ENST00000540408 MAP2K2P36507 400 aa16.31■□□□□ 0.2
COPS7A-211ENST00000540408 GRAPQ13588 217 aa16.31■□□□□ 0.2
COPS7A-211ENST00000540408 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
COPS7A-211ENST00000540408 GRAPLQ8TC17 118 aaPredicted RBP16.31■□□□□ 0.2
COPS7A-211ENST00000540408 ZC3H15Q8WU90 426 aaKnown RBP16.31■□□□□ 0.2
COPS7A-211ENST00000540408 H7C1D1 291 aa16.3■□□□□ 0.2
COPS7A-211ENST00000540408 RAD17O75943 681 aa16.3■□□□□ 0.2
COPS7A-211ENST00000540408 CELF2O95319 508 aaKnown RBP16.3■□□□□ 0.2
COPS7A-211ENST00000540408 ABHD8Q96I13 439 aa16.3■□□□□ 0.2
COPS7A-211ENST00000540408 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
COPS7A-211ENST00000540408 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
COPS7A-211ENST00000540408 CDC37L1Q7L3B6 337 aa16.29■□□□□ 0.2
COPS7A-211ENST00000540408 SAPCD2Q86UD0 394 aa16.29■□□□□ 0.2
COPS7A-211ENST00000540408 PGAP2Q9UHJ9 254 aa16.29■□□□□ 0.2
COPS7A-211ENST00000540408 CA12O43570 354 aa16.28■□□□□ 0.2
COPS7A-211ENST00000540408 HHIPL1Q96JK4 782 aa16.28■□□□□ 0.2
COPS7A-211ENST00000540408 GLIS2Q9BZE0 524 aaPredicted RBP16.28■□□□□ 0.2
COPS7A-211ENST00000540408 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
COPS7A-211ENST00000540408 CHL1O00533 1208 aa16.27■□□□□ 0.2
COPS7A-211ENST00000540408 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
COPS7A-211ENST00000540408 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
COPS7A-211ENST00000540408 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.2
COPS7A-211ENST00000540408 PLBD2Q8NHP8 589 aa16.27■□□□□ 0.2
COPS7A-211ENST00000540408 ZNF408Q9H9D4 720 aa16.27■□□□□ 0.2
COPS7A-211ENST00000540408 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.19
COPS7A-211ENST00000540408 AOC2O75106 756 aa16.26■□□□□ 0.19
COPS7A-211ENST00000540408 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
COPS7A-211ENST00000540408 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
COPS7A-211ENST00000540408 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
COPS7A-211ENST00000540408 HOXB7P09629 217 aa16.25■□□□□ 0.19
COPS7A-211ENST00000540408 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.19
COPS7A-211ENST00000540408 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
COPS7A-211ENST00000540408 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
COPS7A-211ENST00000540408 ANKRD36CQ5JPF3 1778 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 CCDC85CA6NKD9 419 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 HSP90B1P14625 803 aaKnown RBP16.24■□□□□ 0.19
COPS7A-211ENST00000540408 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-211ENST00000540408 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
COPS7A-211ENST00000540408 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 DPF2Q92785 391 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 FAM89AQ96GI7 184 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 EYA3Q99504 573 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
COPS7A-211ENST00000540408 YDJCA8MPS7 323 aa16.23■□□□□ 0.19
COPS7A-211ENST00000540408 RIMBP2O15034 1052 aa16.23■□□□□ 0.19
COPS7A-211ENST00000540408 BRPF1P55201 1214 aaPredicted RBP16.23■□□□□ 0.19
COPS7A-211ENST00000540408 KRT24Q2M2I5 525 aa16.23■□□□□ 0.19
COPS7A-211ENST00000540408 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
COPS7A-211ENST00000540408 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
COPS7A-211ENST00000540408 MYBBP1AQ9BQG0 1328 aaKnown RBP16.22■□□□□ 0.19
COPS7A-211ENST00000540408 ATP5J2-PTCD1G3V325 749 aa16.22■□□□□ 0.19
COPS7A-211ENST00000540408 RPS12P25398 132 aaKnown RBP16.22■□□□□ 0.19
COPS7A-211ENST00000540408 NOGQ13253 232 aa16.22■□□□□ 0.19
COPS7A-211ENST00000540408 USP48Q86UV5 1035 aa16.22■□□□□ 0.19
COPS7A-211ENST00000540408 DCPSQ96C86 337 aaKnown RBP16.22■□□□□ 0.19
COPS7A-211ENST00000540408 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
COPS7A-211ENST00000540408 TSKSQ9UJT2 592 aa16.22■□□□□ 0.19
COPS7A-211ENST00000540408 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
COPS7A-211ENST00000540408 THSD7BQ9C0I4 1608 aa16.22■□□□□ 0.19
COPS7A-211ENST00000540408 G3V3G9 751 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 PSMD14O00487 310 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 HUNKP57058 714 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
COPS7A-211ENST00000540408 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
COPS7A-211ENST00000540408 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
COPS7A-211ENST00000540408 LAMB2P55268 1798 aa16.21■□□□□ 0.18
COPS7A-211ENST00000540408 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
COPS7A-211ENST00000540408 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
COPS7A-211ENST00000540408 GPSM2P81274 684 aa16.2■□□□□ 0.18
COPS7A-211ENST00000540408 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
COPS7A-211ENST00000540408 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
COPS7A-211ENST00000540408 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
COPS7A-211ENST00000540408 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
COPS7A-211ENST00000540408 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
COPS7A-211ENST00000540408 CFAP44Q96MT7 982 aa16.2■□□□□ 0.18
COPS7A-211ENST00000540408 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
COPS7A-211ENST00000540408 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
COPS7A-211ENST00000540408 ECE2O60344 883 aa16.19■□□□□ 0.18
COPS7A-211ENST00000540408 MLLT1Q03111 559 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-211ENST00000540408 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
COPS7A-211ENST00000540408 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
COPS7A-211ENST00000540408 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
COPS7A-211ENST00000540408 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-211ENST00000540408 RBM26Q5T8P6 1007 aaKnown RBP16.19■□□□□ 0.18
COPS7A-211ENST00000540408 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
COPS7A-211ENST00000540408 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
COPS7A-211ENST00000540408 GBA2Q9HCG7 927 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-211ENST00000540408 ANKIB1Q9P2G1 1089 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms