RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 USP50Q70EL3 339 aaPredicted RBP18.63■□□□□ 0.57
SEMA4D-222ENST00000540183 SP8Q8IXZ3 490 aa18.63■□□□□ 0.57
SEMA4D-222ENST00000540183 MPNDQ8N594 471 aa18.63■□□□□ 0.57
SEMA4D-222ENST00000540183 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
SEMA4D-222ENST00000540183 GPRC5DQ9NZD1 345 aa18.63■□□□□ 0.57
SEMA4D-222ENST00000540183 ZNRF3Q9ULT6 936 aa18.63■□□□□ 0.57
SEMA4D-222ENST00000540183 SHTN1A0MZ66 631 aa18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 BBOX1O75936 387 aa18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 GRM1Q13255 1194 aa18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 GRAPQ13588 217 aa18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 GRAPLQ8TC17 118 aaPredicted RBP18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 TMX4Q9H1E5 349 aaPredicted RBP18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
SEMA4D-222ENST00000540183 RAD17O75943 681 aa18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 HSPA8P11142 646 aaKnown RBP18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 CYP4F22Q6NT55 531 aa18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 PAXIP1Q6ZW49 1069 aaPredicted RBP18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 SUPT20HQ8NEM7 779 aa18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 ADARB2Q9NS39 739 aaKnown RBP18.61■□□□□ 0.57
SEMA4D-222ENST00000540183 YDJCA8MPS7 323 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 KIAA2012Q0VF49 1180 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 FAM89AQ96GI7 184 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 CAPNS2Q96L46 248 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 VPS33BQ9H267 617 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 ADAMTS8Q9UP79 889 aa18.6■□□□□ 0.57
SEMA4D-222ENST00000540183 SCN9AQ15858 1988 aa18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 HIRAP54198 1017 aaPredicted RBP18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 RTL5Q5HYW3 569 aaPredicted RBP18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 CIAPIN1Q6FI81 312 aa18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 PLBD2Q8NHP8 589 aa18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 TRPM4Q8TD43 1214 aa18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 GLIS2Q9BZE0 524 aaPredicted RBP18.59■□□□□ 0.57
SEMA4D-222ENST00000540183 WDR43Q15061 677 aaKnown RBP eCLIP18.58■□□□□ 0.56
SEMA4D-222ENST00000540183 CELF1Q92879 486 aaKnown RBP18.58■□□□□ 0.56
SEMA4D-222ENST00000540183 ISCA1Q9BUE6 129 aa18.58■□□□□ 0.56
SEMA4D-222ENST00000540183 AOC2O75106 756 aa18.57■□□□□ 0.56
SEMA4D-222ENST00000540183 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
SEMA4D-222ENST00000540183 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
SEMA4D-222ENST00000540183 TLL2Q9Y6L7 1015 aa18.57■□□□□ 0.56
SEMA4D-222ENST00000540183 CASP8AP2Q9UKL3 1982 aa18.57■□□□□ 0.56
SEMA4D-222ENST00000540183 SPEF2Q9C093 1822 aa18.56■□□□□ 0.56
SEMA4D-222ENST00000540183 DUSP27Q5VZP5 1158 aa18.56■□□□□ 0.56
SEMA4D-222ENST00000540183 DLK2Q6UY11 383 aa18.56■□□□□ 0.56
SEMA4D-222ENST00000540183 GPR101Q96P66 508 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-222ENST00000540183 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
SEMA4D-222ENST00000540183 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
SEMA4D-222ENST00000540183 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
SEMA4D-222ENST00000540183 CELF2O95319 508 aaKnown RBP18.55■□□□□ 0.56
SEMA4D-222ENST00000540183 MAP2K1Q02750 393 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-222ENST00000540183 DBNDD1Q9H9R9 158 aa18.55■□□□□ 0.56
SEMA4D-222ENST00000540183 DBF4Q9UBU7 674 aaPredicted RBP18.55■□□□□ 0.56
SEMA4D-222ENST00000540183 TSKSQ9UJT2 592 aa18.55■□□□□ 0.56
SEMA4D-222ENST00000540183 GPSM2P81274 684 aa18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 TNIP1Q15025 636 aa18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 SF3B3Q15393 1217 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 KCNQ5Q9NR82 932 aa18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 POLLQ9UGP5 575 aa18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 PGAP2Q9UHJ9 254 aa18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 NSFL1CQ9UNZ2 370 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-222ENST00000540183 PSMD14O00487 310 aa18.53■□□□□ 0.56
SEMA4D-222ENST00000540183 HOXB7P09629 217 aa18.53■□□□□ 0.56
SEMA4D-222ENST00000540183 MICALL2Q8IY33 904 aa18.53■□□□□ 0.56
SEMA4D-222ENST00000540183 CFAP44Q96MT7 982 aa18.53■□□□□ 0.56
SEMA4D-222ENST00000540183 PHAXQ9H814 394 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-222ENST00000540183 PSME4Q14997 1843 aa18.53■□□□□ 0.56
SEMA4D-222ENST00000540183 CDHR2Q9BYE9 1310 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 EGFRP00533 1210 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 ECE1P42892 770 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 DOK7Q18PE1 504 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 WASHC4Q2M389 1173 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 SAMD7Q7Z3H4 446 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 SAPCD2Q86UD0 394 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
SEMA4D-222ENST00000540183 MYH3P11055 1940 aa18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 C6orf229H3BNL8 230 aa18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 TMC4Q7Z404 712 aa18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 USP48Q86UV5 1035 aa18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 RTL9Q8NET4 1388 aa18.51■□□□□ 0.55
SEMA4D-222ENST00000540183 ABHD8Q96I13 439 aa18.5■□□□□ 0.55
SEMA4D-222ENST00000540183 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
SEMA4D-222ENST00000540183 H7C1D1 291 aa18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 APAF1O14727 1248 aa18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 ECE2O60344 883 aa18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 TBC1D10BQ4KMP7 808 aaPredicted RBP18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 RIC3Q7Z5B4 369 aa18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 MYD88Q99836 296 aa18.49■□□□□ 0.55
SEMA4D-222ENST00000540183 TRIM28Q13263 835 aaKnown RBP18.48■□□□□ 0.55
SEMA4D-222ENST00000540183 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
SEMA4D-222ENST00000540183 CDC37L1Q7L3B6 337 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms