RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 GRAPLQ8TC17 118 aaPredicted RBP10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 ZNF428Q96B54 188 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 FAM89AQ96GI7 184 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 HACL1Q9UJ83 578 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 COL4A1P02462 1669 aa10.37□□□□□ -0.75
NPIPB4-212ENST00000540103 CXCL9Q07325 125 aa10.36□□□□□ -0.75
NPIPB4-212ENST00000540103 WWC1Q8IX03 1113 aa10.36□□□□□ -0.75
NPIPB4-212ENST00000540103 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
NPIPB4-212ENST00000540103 JDP2Q8WYK2 163 aa10.36□□□□□ -0.75
NPIPB4-212ENST00000540103 CREBZFQ9NS37 354 aa10.36□□□□□ -0.75
NPIPB4-212ENST00000540103 EPS15P42566 896 aa10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 EIF6P56537 245 aaKnown RBP10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 CALD1Q05682 793 aaKnown RBP10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 AOC3Q16853 763 aa10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 MPNDQ8N594 471 aa10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 CELF1Q92879 486 aaKnown RBP10.35□□□□□ -0.75
NPIPB4-212ENST00000540103 YDJCA8MPS7 323 aa10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 IRS4O14654 1257 aaPredicted RBP10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 PPIP5K2O43314 1243 aa10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 KIAA2012Q0VF49 1180 aa10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 PNMA8AQ86V59 439 aaPredicted RBP10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 CNTROBQ8N137 903 aa10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 ZBTB38Q8NAP3 1195 aaPredicted RBP10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 METTL22Q9BUU2 404 aaPredicted RBP10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 ZNRF3Q9ULT6 936 aa10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 DUOX1Q9NRD9 1551 aa10.34□□□□□ -0.75
NPIPB4-212ENST00000540103 IGKV5-2P06315 115 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 EAPPQ56P03 285 aaPredicted RBP10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 CCDC30Q5VVM6 783 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 CCDC191Q8NCU4 936 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 SUPT20HQ8NEM7 779 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 POLLQ9UGP5 575 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 PGAP2Q9UHJ9 254 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 PCNTO95613 3336 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 IL16Q14005 1332 aa10.33□□□□□ -0.76
NPIPB4-212ENST00000540103 PCCAP05165 728 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 RPS8P62241 208 aaKnown RBP10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 FMR1Q06787 632 aaKnown RBP eCLIP10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 RTL5Q5HYW3 569 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 COL13A1Q5TAT6 717 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 G2E3Q7L622 706 aa10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 MYD88Q99836 296 aa10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 RNF39Q9H2S5 420 aa10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 GPRC5DQ9NZD1 345 aa10.32□□□□□ -0.76
NPIPB4-212ENST00000540103 CNTNAP1P78357 1384 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 TMEM88BA6NKF7 163 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 HIRAP54198 1017 aaPredicted RBP10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 GPSM2P81274 684 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 KSR2Q6VAB6 950 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 USP50Q70EL3 339 aaPredicted RBP10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 SEC31BQ9NQW1 1179 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
NPIPB4-212ENST00000540103 PI4KAP2A4QPH2 592 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 PDE8AO60658 829 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 VAMP4O75379 141 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 RAD17O75943 681 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 HSPA1AP0DMV8 641 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 HSPA1BP0DMV9 641 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 CST9Q5W186 159 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 CIAPIN1Q6FI81 312 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 PI4KAP1Q8N8J0 262 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 TMX4Q9H1E5 349 aaPredicted RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 ADARB2Q9NS39 739 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 PODXL2Q9NZ53 605 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
NPIPB4-212ENST00000540103 SHTN1A0MZ66 631 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 RASSF10A6NK89 507 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 H7C1W4 665 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 VEGFBP49765 207 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 WASHC4Q2M389 1173 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 TWISTNBQ3B726 338 aaPredicted RBP10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 WDR63Q8IWG1 891 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 FAM9BQ8IZU0 186 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 TBC1D16Q8TBP0 767 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 CHMP4AQ9BY43 222 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 CWC25Q9NXE8 425 aaPredicted RBP10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 CDHR2Q9BYE9 1310 aa10.29□□□□□ -0.76
NPIPB4-212ENST00000540103 CACNA1FO60840 1977 aa10.28□□□□□ -0.76
NPIPB4-212ENST00000540103 POLR2AP24928 1970 aaKnown RBP10.28□□□□□ -0.76
NPIPB4-212ENST00000540103 SCN9AQ15858 1988 aa10.28□□□□□ -0.76
NPIPB4-212ENST00000540103 NEURL1BA8MQ27 555 aa10.28□□□□□ -0.76
NPIPB4-212ENST00000540103 PSMD14O00487 310 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms