RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PHACTR3Q96KR7 559 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 NLRP3Q96P20 1036 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 BCL2L13Q9BXK5 485 aa7.9□□□□□ -1.14
CPSF7-219ENST00000539952 CDHR2Q9BYE9 1310 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 PRAMEF22A3QJZ6 481 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 PPEF1O14829 653 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-219ENST00000539952 CC2D1BQ5T0F9 858 aaKnown RBP7.89□□□□□ -1.15
CPSF7-219ENST00000539952 PPP1R42Q7Z4L9 355 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 NUTM1Q86Y26 1132 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 SP8Q8IXZ3 490 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 RTFDC1Q9BY42 306 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-219ENST00000539952 SAGE1Q9NXZ1 904 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 ATP6V0A2Q9Y487 856 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 ADAMTSL1Q8N6G6 1762 aa7.89□□□□□ -1.15
CPSF7-219ENST00000539952 NPC1L1Q9UHC9 1359 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 TCERG1O14776 1098 aaKnown RBP7.88□□□□□ -1.15
CPSF7-219ENST00000539952 PRKAR2BP31323 418 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 GMPSP49915 693 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-219ENST00000539952 HUNKP57058 714 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 SLC10A5Q5PT55 438 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 RGMBQ6NW40 437 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 KIF6Q6ZMV9 814 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 MPNDQ8N594 471 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 C2orf69Q8N8R5 385 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 PNISRQ8TF01 805 aaKnown RBP7.88□□□□□ -1.15
CPSF7-219ENST00000539952 DPF2Q92785 391 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 CFAP53Q96M91 514 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 GLIS2Q9BZE0 524 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-219ENST00000539952 ZNF408Q9H9D4 720 aa7.88□□□□□ -1.15
CPSF7-219ENST00000539952 CNOT7Q9UIV1 285 aaKnown RBP7.88□□□□□ -1.15
CPSF7-219ENST00000539952 MAP3K15Q6ZN16 1313 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 HIRAP54198 1017 aaPredicted RBP7.87□□□□□ -1.15
CPSF7-219ENST00000539952 PKN2Q16513 984 aaKnown RBP7.87□□□□□ -1.15
CPSF7-219ENST00000539952 AOC3Q16853 763 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 PARP10Q53GL7 1025 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 PRPF38BQ5VTL8 546 aaKnown RBP7.87□□□□□ -1.15
CPSF7-219ENST00000539952 SUSD4Q5VX71 490 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 MCM10Q7L590 875 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 USP48Q86UV5 1035 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 ZNF34Q8IZ26 560 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 NGEFQ8N5V2 710 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 RRP7AQ9Y3A4 280 aaKnown RBP7.87□□□□□ -1.15
CPSF7-219ENST00000539952 UBR2Q8IWV8 1755 aa7.87□□□□□ -1.15
CPSF7-219ENST00000539952 SNED1Q8TER0 1413 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 CASP8AP2Q9UKL3 1982 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 RIOK3O14730 519 aaKnown RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 DPP8Q6V1X1 898 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 GIGYF2Q6Y7W6 1299 aaKnown RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 DCPSQ96C86 337 aaKnown RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 ZIC5Q96T25 663 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 UTP14AQ9BVJ6 771 aaKnown RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 RSPH6AQ9H0K4 717 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 RNF186Q9NXI6 227 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 PCDHB8Q9UN66 801 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 PCDHB13Q9Y5F0 798 aa7.86□□□□□ -1.15
CPSF7-219ENST00000539952 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
CPSF7-219ENST00000539952 IBTKQ9P2D0 1353 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-219ENST00000539952 PDE4DIPQ5VU43 2346 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 ARFGEF2Q9Y6D5 1785 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 TRPA1O75762 1119 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 RAD17O75943 681 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 NEFMP07197 916 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-219ENST00000539952 GPTP24298 496 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 ZNF157P51786 506 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-219ENST00000539952 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.15
CPSF7-219ENST00000539952 TTLL7Q6ZT98 887 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 TMC4Q7Z404 712 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 CTU1Q7Z7A3 348 aaKnown RBP7.85□□□□□ -1.15
CPSF7-219ENST00000539952 GCC1Q96CN9 775 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 GBA2Q9HCG7 927 aaPredicted RBP7.85□□□□□ -1.15
CPSF7-219ENST00000539952 CACNA1SQ13698 1873 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 RIC1Q4ADV7 1423 aa7.85□□□□□ -1.15
CPSF7-219ENST00000539952 SCN7AQ01118 1682 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-219ENST00000539952 NTSR2O95665 410 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 RPS12P25398 132 aaKnown RBP7.84□□□□□ -1.15
CPSF7-219ENST00000539952 SOX10P56693 466 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 DCTN1Q14203 1278 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 DDX46Q7L014 1031 aaKnown RBP7.84□□□□□ -1.15
CPSF7-219ENST00000539952 KRT26Q7Z3Y9 468 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 BBXQ8WY36 941 aaPredicted RBP7.84□□□□□ -1.15
CPSF7-219ENST00000539952 CSRNP1Q96S65 589 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 MIS18AQ9NYP9 233 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 TAOK2Q9UL54 1235 aa7.84□□□□□ -1.15
CPSF7-219ENST00000539952 TRPM7Q96QT4 1865 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 ERBB4Q15303 1308 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.83□□□□□ -1.16
CPSF7-219ENST00000539952 CHRM1P11229 460 aaPredicted RBP7.83□□□□□ -1.16
CPSF7-219ENST00000539952 MYL6BP14649 208 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 EIF4A1P60842 406 aaKnown RBP7.83□□□□□ -1.16
CPSF7-219ENST00000539952 WASHC4Q2M389 1173 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 HSP90AB3PQ58FF7 597 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 TRPM4Q8TD43 1214 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 ZFP91Q96JP5 570 aaPredicted RBP7.83□□□□□ -1.16
CPSF7-219ENST00000539952 ZBTB3Q9H5J0 574 aa7.83□□□□□ -1.16
CPSF7-219ENST00000539952 ABCC12Q96J65 1359 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 385.7 ms