RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 IRS4O14654 1257 aaPredicted RBP20.8■□□□□ 0.92
LTBR-207ENST00000539925 CAMTA2O94983 1202 aa20.8■□□□□ 0.92
LTBR-207ENST00000539925 GPTP24298 496 aa20.8■□□□□ 0.92
LTBR-207ENST00000539925 CTSWP56202 376 aa20.8■□□□□ 0.92
LTBR-207ENST00000539925 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
LTBR-207ENST00000539925 NUP98P52948 1817 aa20.8■□□□□ 0.92
LTBR-207ENST00000539925 UTP14AQ9BVJ6 771 aaKnown RBP20.8■□□□□ 0.92
LTBR-207ENST00000539925 DBNLQ9UJU6 430 aaKnown RBP20.8■□□□□ 0.92
LTBR-207ENST00000539925 SH3TC1Q8TE82 1336 aa20.79■□□□□ 0.92
LTBR-207ENST00000539925 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
LTBR-207ENST00000539925 ANKRD18BA2A2Z9 1011 aa20.79■□□□□ 0.92
LTBR-207ENST00000539925 K7ELQ4 463 aaPredicted RBP20.78■□□□□ 0.92
LTBR-207ENST00000539925 MCM2P49736 904 aa20.78■□□□□ 0.92
LTBR-207ENST00000539925 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
LTBR-207ENST00000539925 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.78■□□□□ 0.92
LTBR-207ENST00000539925 MAP4K4O95819 1239 aaPredicted RBP20.77■□□□□ 0.91
LTBR-207ENST00000539925 TLR7Q9NYK1 1049 aaKnown RBP20.77■□□□□ 0.91
LTBR-207ENST00000539925 HAUS7Q99871 368 aa20.76■□□□□ 0.91
LTBR-207ENST00000539925 BOLA2Q9H3K6 86 aa20.76■□□□□ 0.91
LTBR-207ENST00000539925 SNRKQ9NRH2 765 aa20.76■□□□□ 0.91
LTBR-207ENST00000539925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.76■□□□□ 0.91
LTBR-207ENST00000539925 ZNF609O15014 1411 aa20.75■□□□□ 0.91
LTBR-207ENST00000539925 UBN2Q6ZU65 1347 aa20.75■□□□□ 0.91
LTBR-207ENST00000539925 FSD1Q9BTV5 496 aa20.75■□□□□ 0.91
LTBR-207ENST00000539925 ANTXR1Q9H6X2 564 aa20.75■□□□□ 0.91
LTBR-207ENST00000539925 CIZ1Q9ULV3 898 aaPredicted RBP20.75■□□□□ 0.91
LTBR-207ENST00000539925 ITGA6P23229 1130 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 HSPA4P34932 840 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
LTBR-207ENST00000539925 CWC27Q6UX04 472 aaKnown RBP20.74■□□□□ 0.91
LTBR-207ENST00000539925 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 DBNDD2Q9BQY9 259 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 CHMP5Q9NZZ3 219 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 ABCC12Q96J65 1359 aa20.74■□□□□ 0.91
LTBR-207ENST00000539925 RPS6KA4O75676 772 aa20.73■□□□□ 0.91
LTBR-207ENST00000539925 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
LTBR-207ENST00000539925 NIP7Q9Y221 180 aaKnown RBP eCLIP20.73■□□□□ 0.91
LTBR-207ENST00000539925 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
LTBR-207ENST00000539925 LRRC24Q50LG9 513 aa20.73■□□□□ 0.91
LTBR-207ENST00000539925 CCDC158Q5M9N0 1113 aa20.73■□□□□ 0.91
LTBR-207ENST00000539925 NEUROD6Q96NK8 337 aa20.73■□□□□ 0.91
LTBR-207ENST00000539925 MYH3P11055 1940 aa20.72■□□□□ 0.91
LTBR-207ENST00000539925 A0A1B0GUL7 405 aa20.72■□□□□ 0.91
LTBR-207ENST00000539925 HSP90AA1P07900 732 aaKnown RBP20.72■□□□□ 0.91
LTBR-207ENST00000539925 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
LTBR-207ENST00000539925 LDHAL6AQ6ZMR3 332 aa20.72■□□□□ 0.91
LTBR-207ENST00000539925 ZNF594Q96JF6 807 aaPredicted RBP20.72■□□□□ 0.91
LTBR-207ENST00000539925 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
LTBR-207ENST00000539925 LSG1Q9H089 658 aaKnown RBP20.72■□□□□ 0.91
LTBR-207ENST00000539925 QTRT2Q9H974 415 aaKnown RBP20.72■□□□□ 0.91
LTBR-207ENST00000539925 CCNL1Q9UK58 526 aaPredicted RBP20.72■□□□□ 0.91
LTBR-207ENST00000539925 BTAF1O14981 1849 aa20.72■□□□□ 0.91
LTBR-207ENST00000539925 CCDC152Q4G0S7 254 aa20.71■□□□□ 0.91
LTBR-207ENST00000539925 GREM2Q9H772 168 aa20.71■□□□□ 0.91
LTBR-207ENST00000539925 RIPOR2Q9Y4F9 1068 aa20.71■□□□□ 0.91
LTBR-207ENST00000539925 SLKQ9H2G2 1235 aaPredicted RBP20.7■□□□□ 0.91
LTBR-207ENST00000539925 BCORQ6W2J9 1755 aa20.7■□□□□ 0.9
LTBR-207ENST00000539925 MROH5Q6ZUA9 1318 aa20.7■□□□□ 0.9
LTBR-207ENST00000539925 SPEF2Q9C093 1822 aa20.7■□□□□ 0.9
LTBR-207ENST00000539925 METTL24Q5JXM2 366 aa20.7■□□□□ 0.9
LTBR-207ENST00000539925 PUS3Q9BZE2 481 aaKnown RBP20.7■□□□□ 0.9
LTBR-207ENST00000539925 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
LTBR-207ENST00000539925 NTSR2O95665 410 aa20.69■□□□□ 0.9
LTBR-207ENST00000539925 GORABQ5T7V8 394 aa20.69■□□□□ 0.9
LTBR-207ENST00000539925 FAM196AQ6ZSG2 479 aa20.69■□□□□ 0.9
LTBR-207ENST00000539925 KBTBD3Q8NAB2 608 aa20.69■□□□□ 0.9
LTBR-207ENST00000539925 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
LTBR-207ENST00000539925 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
LTBR-207ENST00000539925 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
LTBR-207ENST00000539925 ZNF512BQ96KM6 892 aaPredicted RBP20.68■□□□□ 0.9
LTBR-207ENST00000539925 IFIT1P09914 478 aaKnown RBP20.67■□□□□ 0.9
LTBR-207ENST00000539925 TIMM10P62072 90 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 NMIQ13287 307 aaPredicted RBP20.67■□□□□ 0.9
LTBR-207ENST00000539925 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 ZPR1O75312 459 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 ATP2B3Q16720 1220 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 RNF20Q5VTR2 975 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 SYNE4Q8N205 404 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 KCNB2Q92953 911 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 CWC22Q9HCG8 908 aaKnown RBP20.67■□□□□ 0.9
LTBR-207ENST00000539925 PAG1Q9NWQ8 432 aa20.67■□□□□ 0.9
LTBR-207ENST00000539925 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
LTBR-207ENST00000539925 ZKSCAN1P17029 563 aaPredicted RBP20.66■□□□□ 0.9
LTBR-207ENST00000539925 ADRA2BP18089 450 aa20.66■□□□□ 0.9
LTBR-207ENST00000539925 NEK4P51957 841 aa20.66■□□□□ 0.9
LTBR-207ENST00000539925 TTC39AQ5SRH9 613 aa20.66■□□□□ 0.9
LTBR-207ENST00000539925 DNAJC2Q99543 621 aaKnown RBP20.66■□□□□ 0.9
LTBR-207ENST00000539925 LRP5O75197 1615 aa20.66■□□□□ 0.9
LTBR-207ENST00000539925 LY75O60449 1722 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 LAMB2P55268 1798 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 NBR1Q14596 966 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 NFKBIBQ15653 356 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 XAGE2Q96GT9 111 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 CDC5LQ99459 802 aaKnown RBP20.65■□□□□ 0.9
LTBR-207ENST00000539925 TM6SF1Q9BZW5 370 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 IL25Q9H293 177 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 RIC1Q4ADV7 1423 aa20.65■□□□□ 0.9
LTBR-207ENST00000539925 SCN7AQ01118 1682 aa20.64■□□□□ 0.9
LTBR-207ENST00000539925 PDE8BO95263 885 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms