RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 TAF1P21675 1872 aa16.42■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 GPC2Q8N158 579 aa16.41■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 MPNDQ8N594 471 aa16.41■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 SCN4AP35499 1836 aa16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 EPHX2P34913 555 aa16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 TRIM28Q13263 835 aaKnown RBP16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 CELF1Q92879 486 aaKnown RBP16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 IL16Q14005 1332 aa16.4■□□□□ 0.22
TSPAN9-IT1-201ENST00000539784 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 COL4A1P02462 1669 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 G2E3Q7L622 706 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 TMC4Q7Z404 712 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CCDC85AQ96PX6 553 aaPredicted RBP16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 RTFDC1Q9BY42 306 aaPredicted RBP16.37■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 SEC31BQ9NQW1 1179 aa16.36■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 NSFL1CQ9UNZ2 370 aaKnown RBP16.36■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 EPS15P42566 896 aa16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 SCNN1DP51172 638 aa16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 KIAA2012Q0VF49 1180 aa16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 WDR63Q8IWG1 891 aa16.35■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 LRRC37AA6NMS7 1700 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 PDE8AO60658 829 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 RAD17O75943 681 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 IGKV5-2P06315 115 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 GPSM2P81274 684 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 EXOSC9Q06265 439 aaKnown RBP16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CXCL9Q07325 125 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CWF19L2Q2TBE0 894 aaKnown RBP16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
TSPAN9-IT1-201ENST00000539784 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 GPR101Q96P66 508 aaPredicted RBP16.33■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 FLIIQ13045 1269 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 PASKQ96RG2 1323 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 YDJCA8MPS7 323 aa16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 VAMP4O75379 141 aa16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ITGBL1O95965 494 aaPredicted RBP16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 DBNDD1Q9H9R9 158 aa16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 CDHR2Q9BYE9 1310 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 CTSWP56202 376 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 TNIP1Q15025 636 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 EYA3Q99504 573 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 UFL1O94874 794 aa16.29■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 G3V3G9 751 aa16.28■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ECE2O60344 883 aa16.28■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 DNAAF4Q8WXU2 420 aa16.28■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 GGA1Q9UJY5 639 aa16.28■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms