RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 TTLL11Q8NHH1 800 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 KLHDC4Q8TBB5 520 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
TRAF3-204ENST00000539721 COPRSQ9NQ92 184 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 PDE4AP27815 886 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 PTPN12Q05209 780 aaKnown RBP20■□□□□ 0.79
TRAF3-204ENST00000539721 G3BP1Q13283 466 aaKnown RBP eCLIP20■□□□□ 0.79
TRAF3-204ENST00000539721 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 FAM161AQ3B820 660 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 BCL11AQ9H165 835 aa20■□□□□ 0.79
TRAF3-204ENST00000539721 NPHP1O15259 732 aa19.99■□□□□ 0.79
TRAF3-204ENST00000539721 SIL1Q9H173 461 aa19.99■□□□□ 0.79
TRAF3-204ENST00000539721 ERC1Q8IUD2 1116 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 KIF1BPQ96EK5 621 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 ABCC12Q96J65 1359 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 TM4SF1P30408 202 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
TRAF3-204ENST00000539721 NLGN1Q8N2Q7 840 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 RHPN1Q8TCX5 695 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 GREM2Q9H772 168 aa19.98■□□□□ 0.79
TRAF3-204ENST00000539721 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
TRAF3-204ENST00000539721 ITGA6P23229 1130 aa19.96■□□□□ 0.79
TRAF3-204ENST00000539721 TAF7LQ5H9L4 462 aa19.96■□□□□ 0.79
TRAF3-204ENST00000539721 CNBD1Q8NA66 436 aa19.96■□□□□ 0.79
TRAF3-204ENST00000539721 ZNF594Q96JF6 807 aaPredicted RBP19.96■□□□□ 0.79
TRAF3-204ENST00000539721 ANKRD18BA2A2Z9 1011 aa19.95■□□□□ 0.78
TRAF3-204ENST00000539721 SERPINB2P05120 415 aa19.95■□□□□ 0.78
TRAF3-204ENST00000539721 CCDC152Q4G0S7 254 aa19.95■□□□□ 0.78
TRAF3-204ENST00000539721 UPF1Q92900 1129 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRAF3-204ENST00000539721 DDR1Q08345 913 aa19.95■□□□□ 0.78
TRAF3-204ENST00000539721 CCDC24Q8N4L8 307 aa19.95■□□□□ 0.78
TRAF3-204ENST00000539721 IL1RAPL2Q9NP60 686 aa19.95■□□□□ 0.78
TRAF3-204ENST00000539721 POLRMTO00411 1230 aaKnown RBP19.94■□□□□ 0.78
TRAF3-204ENST00000539721 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
TRAF3-204ENST00000539721 PRR5LQ6MZQ0 368 aa19.93■□□□□ 0.78
TRAF3-204ENST00000539721 C16orf71Q8IYS4 520 aaPredicted RBP19.93■□□□□ 0.78
TRAF3-204ENST00000539721 NLRP3Q96P20 1036 aa19.93■□□□□ 0.78
TRAF3-204ENST00000539721 RTL9Q8NET4 1388 aa19.93■□□□□ 0.78
TRAF3-204ENST00000539721 SASH1O94885 1247 aa19.93■□□□□ 0.78
TRAF3-204ENST00000539721 ST5P78524 1137 aa19.93■□□□□ 0.78
TRAF3-204ENST00000539721 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
TRAF3-204ENST00000539721 SPEF2Q9C093 1822 aa19.92■□□□□ 0.78
TRAF3-204ENST00000539721 NRXN2Q9P2S2 1712 aa19.92■□□□□ 0.78
TRAF3-204ENST00000539721 EYA2O00167 538 aa19.92■□□□□ 0.78
TRAF3-204ENST00000539721 SF3B3Q15393 1217 aaKnown RBP19.92■□□□□ 0.78
TRAF3-204ENST00000539721 C3orf67Q6ZVT6 689 aa19.92■□□□□ 0.78
TRAF3-204ENST00000539721 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
TRAF3-204ENST00000539721 CIAO1O76071 339 aa19.91■□□□□ 0.78
TRAF3-204ENST00000539721 LRRC24Q50LG9 513 aa19.91■□□□□ 0.78
TRAF3-204ENST00000539721 CLASRPQ8N2M8 674 aaKnown RBP19.91■□□□□ 0.78
TRAF3-204ENST00000539721 OTUD7AQ8TE49 926 aaPredicted RBP19.91■□□□□ 0.78
TRAF3-204ENST00000539721 RIC1Q4ADV7 1423 aa19.91■□□□□ 0.78
TRAF3-204ENST00000539721 LRP5O75197 1615 aa19.91■□□□□ 0.78
TRAF3-204ENST00000539721 IL15P40933 162 aaPredicted RBP19.9■□□□□ 0.78
TRAF3-204ENST00000539721 ATG9AQ7Z3C6 839 aa19.9■□□□□ 0.78
TRAF3-204ENST00000539721 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
TRAF3-204ENST00000539721 PUS3Q9BZE2 481 aaKnown RBP19.9■□□□□ 0.78
TRAF3-204ENST00000539721 SEC31BQ9NQW1 1179 aa19.9■□□□□ 0.78
TRAF3-204ENST00000539721 PARP3Q9Y6F1 533 aa19.9■□□□□ 0.78
TRAF3-204ENST00000539721 MMP10P09238 476 aa19.9■□□□□ 0.78
TRAF3-204ENST00000539721 TFCP2Q12800 502 aa19.89■□□□□ 0.77
TRAF3-204ENST00000539721 LDHAL6AQ6ZMR3 332 aa19.89■□□□□ 0.77
TRAF3-204ENST00000539721 CDC5LQ99459 802 aaKnown RBP19.88■□□□□ 0.77
TRAF3-204ENST00000539721 CNNM1Q9NRU3 951 aa19.88■□□□□ 0.77
TRAF3-204ENST00000539721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.88■□□□□ 0.77
TRAF3-204ENST00000539721 TAF1P21675 1872 aa19.88■□□□□ 0.77
TRAF3-204ENST00000539721 IGHMBP2P38935 993 aaKnown RBP19.87■□□□□ 0.77
TRAF3-204ENST00000539721 AACSQ86V21 672 aa19.87■□□□□ 0.77
TRAF3-204ENST00000539721 MPHOSPH8Q99549 860 aa19.87■□□□□ 0.77
TRAF3-204ENST00000539721 PDGFDQ9GZP0 370 aaPredicted RBP19.87■□□□□ 0.77
TRAF3-204ENST00000539721 SALL3Q9BXA9 1300 aa19.87■□□□□ 0.77
TRAF3-204ENST00000539721 IFIT2P09913 472 aaKnown RBP19.86■□□□□ 0.77
TRAF3-204ENST00000539721 MX1P20591 662 aa19.86■□□□□ 0.77
TRAF3-204ENST00000539721 ANKRD31Q8N7Z5 1873 aa19.86■□□□□ 0.77
TRAF3-204ENST00000539721 PDE1AP54750 535 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 TNNI3KQ59H18 835 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 EAF2Q96CJ1 260 aaPredicted RBP19.85■□□□□ 0.77
TRAF3-204ENST00000539721 CEP126Q9P2H0 1117 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 RIPOR2Q9Y4F9 1068 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 FPGT-TNNI3KV9GXZ4 949 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 COL4A1P02462 1669 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 DDX46Q7L014 1031 aaKnown RBP19.85■□□□□ 0.77
TRAF3-204ENST00000539721 ANKRD18AQ8IVF6 992 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 SLC16A10Q8TF71 515 aa19.85■□□□□ 0.77
TRAF3-204ENST00000539721 METTL24Q5JXM2 366 aa19.84■□□□□ 0.77
TRAF3-204ENST00000539721 CCDC8Q9H0W5 538 aaPredicted RBP19.84■□□□□ 0.77
TRAF3-204ENST00000539721 OSBPL3Q9H4L5 887 aa19.84■□□□□ 0.77
TRAF3-204ENST00000539721 GPR108Q9NPR9 543 aa19.83■□□□□ 0.77
TRAF3-204ENST00000539721 STAP2Q9UGK3 403 aa19.83■□□□□ 0.77
TRAF3-204ENST00000539721 ZNF609O15014 1411 aa19.83■□□□□ 0.76
TRAF3-204ENST00000539721 TTC22Q5TAA0 569 aa19.83■□□□□ 0.76
TRAF3-204ENST00000539721 TSHZ3Q63HK5 1081 aa19.83■□□□□ 0.76
TRAF3-204ENST00000539721 RPGRQ92834 1020 aaKnown RBP19.83■□□□□ 0.76
TRAF3-204ENST00000539721 CELF1Q92879 486 aaKnown RBP19.83■□□□□ 0.76
TRAF3-204ENST00000539721 MROH5Q6ZUA9 1318 aa19.82■□□□□ 0.76
TRAF3-204ENST00000539721 GPATCH3Q96I76 525 aa19.82■□□□□ 0.76
TRAF3-204ENST00000539721 BRIP1Q9BX63 1249 aa19.82■□□□□ 0.76
TRAF3-204ENST00000539721 AKAP2Q9Y2D5 859 aa19.82■□□□□ 0.76
TRAF3-204ENST00000539721 AOX1Q06278 1338 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms