RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
TSPAN9-207ENST00000539631 PLIN1O60240 522 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 ALDH1B1P30837 517 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 CTSWP56202 376 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 PRPF40BQ6NWY9 871 aaKnown RBP16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 DZIP1LQ8IYY4 767 aaKnown RBP16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 TMEM57Q8N5G2 664 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 PLA2G12BQ9BX93 195 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
TSPAN9-207ENST00000539631 RLBP1P12271 317 aa16.03■□□□□ 0.16
TSPAN9-207ENST00000539631 FOXO4P98177 505 aa16.03■□□□□ 0.16
TSPAN9-207ENST00000539631 DDX46Q7L014 1031 aaKnown RBP16.03■□□□□ 0.16
TSPAN9-207ENST00000539631 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
TSPAN9-207ENST00000539631 C21orf2O43822 256 aa16.02■□□□□ 0.16
TSPAN9-207ENST00000539631 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.16
TSPAN9-207ENST00000539631 EPHA10Q5JZY3 1008 aa16.02■□□□□ 0.16
TSPAN9-207ENST00000539631 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
TSPAN9-207ENST00000539631 KAZALD1Q96I82 304 aa16.02■□□□□ 0.16
TSPAN9-207ENST00000539631 SEC31BQ9NQW1 1179 aa16.02■□□□□ 0.16
TSPAN9-207ENST00000539631 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 CSF1RP07333 972 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 GRAPQ13588 217 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 SLC51AQ86UW1 340 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 GRAPLQ8TC17 118 aaPredicted RBP16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 PANK1Q8TE04 598 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 MEIS3Q99687 375 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 GREM2Q9H772 168 aa16.01■□□□□ 0.15
TSPAN9-207ENST00000539631 CCDC88AQ3V6T2 1871 aa16■□□□□ 0.15
TSPAN9-207ENST00000539631 PPEF1O14829 653 aaPredicted RBP16■□□□□ 0.15
TSPAN9-207ENST00000539631 GRIN3BO60391 1043 aa16■□□□□ 0.15
TSPAN9-207ENST00000539631 OLFM4Q6UX06 510 aa16■□□□□ 0.15
TSPAN9-207ENST00000539631 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
TSPAN9-207ENST00000539631 C7orf43Q8WVR3 580 aa16■□□□□ 0.15
TSPAN9-207ENST00000539631 LRRC37AA6NMS7 1700 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 UBTFL1P0CB47 393 aaPredicted RBP15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 MS4A1P11836 297 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 CHD4Q14839 1912 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 SBF1O95248 1867 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
TSPAN9-207ENST00000539631 BBOX1O75936 387 aa15.98■□□□□ 0.15
TSPAN9-207ENST00000539631 C20orf194Q5TEA3 1177 aa15.98■□□□□ 0.15
TSPAN9-207ENST00000539631 ITPRIPQ8IWB1 547 aa15.98■□□□□ 0.15
TSPAN9-207ENST00000539631 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
TSPAN9-207ENST00000539631 CHMP3Q9Y3E7 222 aa15.98■□□□□ 0.15
TSPAN9-207ENST00000539631 GNAI3P08754 354 aa15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 ITGA6P23229 1130 aa15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 C1QTNF8P60827 252 aa15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 LRRFIP2Q9Y608 721 aaKnown RBP15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 GOLGB1Q14789 3259 aaKnown RBP15.97■□□□□ 0.15
TSPAN9-207ENST00000539631 RRP1P56182 461 aaKnown RBP15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 RASSF7Q02833 373 aa15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 RABL6Q3YEC7 729 aaPredicted RBP15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 COG6Q9Y2V7 657 aa15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.15
TSPAN9-207ENST00000539631 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 ANKRD18BA2A2Z9 1011 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 NFKBIEO00221 500 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 PDE3AQ14432 1141 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 SOGA3Q5TF21 947 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 SP8Q8IXZ3 490 aa15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 CDC5LQ99459 802 aaKnown RBP15.95■□□□□ 0.14
TSPAN9-207ENST00000539631 IFIT5Q13325 482 aaKnown RBP15.94■□□□□ 0.14
TSPAN9-207ENST00000539631 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
TSPAN9-207ENST00000539631 CC2D2BQ6DHV5 1058 aa15.94■□□□□ 0.14
TSPAN9-207ENST00000539631 TMC4Q7Z404 712 aa15.94■□□□□ 0.14
TSPAN9-207ENST00000539631 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
TSPAN9-207ENST00000539631 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
TSPAN9-207ENST00000539631 CCDC57Q2TAC2 916 aa15.93■□□□□ 0.14
TSPAN9-207ENST00000539631 RTKN2Q8IZC4 609 aa15.93■□□□□ 0.14
TSPAN9-207ENST00000539631 ZNF594Q96JF6 807 aaPredicted RBP15.93■□□□□ 0.14
TSPAN9-207ENST00000539631 TMX4Q9H1E5 349 aaPredicted RBP15.93■□□□□ 0.14
TSPAN9-207ENST00000539631 DICER1Q9UPY3 1922 aaKnown RBP15.93■□□□□ 0.14
TSPAN9-207ENST00000539631 GNAI2P04899 355 aa15.92■□□□□ 0.14
TSPAN9-207ENST00000539631 IGHMBP2P38935 993 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-207ENST00000539631 PRELPP51888 382 aa15.92■□□□□ 0.14
TSPAN9-207ENST00000539631 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
TSPAN9-207ENST00000539631 GPSM2P81274 684 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 TAF7LQ5H9L4 462 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 MPNDQ8N594 471 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 MPHOSPH8Q99549 860 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 BSDC1Q9NW68 430 aaPredicted RBP15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 DDX19BQ9UMR2 479 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
TSPAN9-207ENST00000539631 LTBP3Q9NS15 1303 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms