RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 GSTTP1A0A1W2PQM5 241 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 SETDB2Q96T68 719 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ZBTB43O43298 467 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 TBC1D5Q92609 795 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 TTC12Q9H892 705 aaPredicted RBP7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ATP5J2-PTCD1G3V325 749 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ERMNQ8TAM6 284 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ESR2Q92731 530 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.44□□□□□ -1.22
LSAMP-207ENST00000539563 NPHP3Q7Z494 1330 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 GNAT2P19087 354 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 PAXBP1Q9Y5B6 917 aa7.44□□□□□ -1.22
LSAMP-207ENST00000539563 ZSCAN22P10073 491 aaPredicted RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CTNNA2P26232 953 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 TMC6Q7Z403 805 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 RHPN1Q8TCX5 695 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 TSPY3P0CV98 308 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 TSPY8P0CW00 308 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC144CPQ8IYA2 1237 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC113Q9H0I3 377 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 TFIP11Q9UBB9 837 aaKnown RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 KIAA0556O60303 1618 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 SYKP43405 635 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 GIGYF2Q6Y7W6 1299 aaKnown RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 USP37Q86T82 979 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 RTN1Q16799 776 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 PLVAPQ9BX97 442 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 VAT1LQ9HCJ6 419 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 ADCY5O95622 1261 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 MICU3Q86XE3 530 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CKAP2LQ8IYA6 745 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 KDM5AP29375 1690 aaKnown RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 ATP10BO94823 1461 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CTNNBL1Q8WYA6 563 aaPredicted RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 BCCIPQ9P287 314 aaKnown RBP eCLIP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC171Q6TFL3 1326 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 RIMS2Q9UQ26 1411 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 IL15P40933 162 aaPredicted RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CKAP4Q07065 602 aaKnown RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
LSAMP-207ENST00000539563 PRAG1Q86YV5 1406 aa7.43□□□□□ -1.22
LSAMP-207ENST00000539563 CALM1P0DP23 149 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CALM2P0DP24 149 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CALM3P0DP25 149 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 NOP2P46087 812 aaKnown RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 ZNF165P49910 485 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 ANKRD44Q8N8A2 993 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CHPF2Q9P2E5 772 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 RBM27Q9P2N5 1060 aaKnown RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 HDAC9Q9UKV0 1011 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 TRPM2O94759 1503 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CFAP74Q9C0B2 1584 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 PRC1O43663 620 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 STAT6P42226 847 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 WDR78Q5VTH9 848 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC174Q6PII3 467 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 ALG1Q9BT22 464 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 GTPBP4Q9BZE4 634 aaKnown RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 SDSP20132 328 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 NBPF5PQ86XG9 351 aaPredicted RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 KIF1BO60333 1816 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CYP7A1P22680 504 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 ATP8B2P98198 1209 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 KSR2Q6VAB6 950 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 NLRP3Q96P20 1036 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 WDR7Q9Y4E6 1490 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 TMCO5BA8MYB1 307 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 TCERG1LQ5VWI1 586 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 LRRC45Q96CN5 670 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CCDC97Q96F63 343 aaPredicted RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 ESYT1Q9BSJ8 1104 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 SELENOOQ9BVL4 669 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 SAMM50Q9Y512 469 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CALML3P27482 149 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 NF2P35240 595 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 ATP2B3Q16720 1220 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 KLHL40Q2TBA0 621 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 DNMT1P26358 1616 aaKnown RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 CYLC1P35663 651 aaPredicted RBP7.42□□□□□ -1.22
LSAMP-207ENST00000539563 LRSAM1Q6UWE0 723 aa7.42□□□□□ -1.22
LSAMP-207ENST00000539563 KLF18A0A0U1RQI7 1052 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TBCAO75347 108 aaKnown RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 UBASH3AP57075 661 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 HAND2P61296 217 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 ZNF622Q969S3 477 aaKnown RBP eCLIP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 USP25Q9UHP3 1055 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TTC41PQ6P2S7 1318 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 RTL9Q8NET4 1388 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 SPECC1Q5M775 1068 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 CPLX3Q8WVH0 158 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 BBXQ8WY36 941 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 SLC4A4Q9Y6R1 1079 aa7.41□□□□□ -1.22
LSAMP-207ENST00000539563 ZNF608Q9ULD9 1512 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-207ENST00000539563 TMX3Q96JJ7 454 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms