RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SNAPC4Q5SXM2 1469 aa5.7□□□□□ -1.5
AC055720.1-201ENST00000539552 HMGXB3Q12766 1538 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 SFI1A8K8P3 1242 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 EML1O00423 815 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 AFF1P51825 1210 aaKnown RBP5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 GP2P55259 537 aaKnown RBP5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 SEMA3FQ13275 785 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 EML3Q32P44 896 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 IGF2-ASQ6U949 168 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 ZNF295-AS1Q8N0V1 137 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 SCHIP1Q9P0W5 487 aaPredicted RBP5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 USP3Q9Y6I4 520 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 SMARCA4P51532 1647 aa5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 ZNF608Q9ULD9 1512 aaPredicted RBP5.69□□□□□ -1.5
AC055720.1-201ENST00000539552 NOS3P29474 1203 aa5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 GRIK1P39086 918 aa5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 ABL2P42684 1182 aa5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 KCNA1Q09470 495 aa5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 HIF1AQ16665 826 aa5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 MSL1Q68DK7 614 aa5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 FAM177A1Q8N128 213 aaPredicted RBP5.68□□□□□ -1.5
AC055720.1-201ENST00000539552 PCF11O94913 1555 aaKnown RBP5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 CD97P48960 835 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 KCNQ4P56696 695 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 FBXO11Q86XK2 927 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 WFDC8Q8IUA0 241 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 SLC9A9Q8IVB4 645 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 CHIC2Q9UKJ5 165 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 NOD1Q9Y239 953 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 DIP2BQ9P265 1576 aa5.67□□□□□ -1.5
AC055720.1-201ENST00000539552 GPR37L1O60883 481 aa5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 DCAF11Q8TEB1 546 aa5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 ZDHHC1Q8WTX9 485 aa5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 MEGF10Q96KG7 1140 aa5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 GDPD2Q9HCC8 539 aa5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 SNRKQ9NRH2 765 aa5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 DNAJB12Q9NXW2 375 aaKnown RBP5.66□□□□□ -1.5
AC055720.1-201ENST00000539552 TSPOAP1O95153 1857 aa5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 CEP350Q5VT06 3117 aa5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 EIF4G3O43432 1585 aaKnown RBP5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 C1orf53Q5VUE5 145 aa5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 FAM35AQ86V20 835 aa5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 HSH2DQ96JZ2 352 aa5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 AKTIPQ9H8T0 292 aa5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 OAS3Q9Y6K5 1087 aaKnown RBP5.65□□□□□ -1.5
AC055720.1-201ENST00000539552 GAPVD1Q14C86 1478 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 CPB1P15086 417 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 PSMA6P60900 246 aaKnown RBP5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 GTF2IP78347 998 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 TYRO3Q06418 890 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 VAC14Q08AM6 782 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 WASHC4Q2M389 1173 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 TBCELQ5QJ74 424 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 ELMSAN1Q6PJG2 1045 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 GLMNQ92990 594 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 PBXIP1Q96AQ6 731 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 ZNF358Q9NW07 568 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 TBC1D2BQ9UPU7 963 aa5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.64□□□□□ -1.51
AC055720.1-201ENST00000539552 TOP2BQ02880 1626 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 BRD1O95696 1058 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 ARID4AP29374 1257 aaPredicted RBP5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 SOX11P35716 441 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 CCDC27Q2M243 656 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 INTS5Q6P9B9 1019 aaKnown RBP5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 PHACTR1Q9C0D0 580 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 USTQ9Y2C2 406 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 HCN4Q9Y3Q4 1203 aa5.63□□□□□ -1.51
AC055720.1-201ENST00000539552 LZTS3O60299 673 aaPredicted RBP5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 IGLV1-40P01703 118 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 EPB42P16452 691 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 BRD2P25440 801 aaKnown RBP5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 CANXP27824 592 aaKnown RBP5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 SUSD3Q96L08 255 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 IGSF5Q9NSI5 407 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 FRRS1LQ9P0K9 344 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 STOML1Q9UBI4 398 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 RAXQ9Y2V3 346 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 PCDHGA11Q9Y5H2 935 aa5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 SETD1AO15047 1707 aaKnown RBP5.62□□□□□ -1.51
AC055720.1-201ENST00000539552 GLB1P16278 677 aa5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 NFKB1P19838 968 aa5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 CCINQ13939 588 aa5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 ABCC10Q5T3U5 1492 aa5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 TNS4Q8IZW8 715 aa5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 ATAD2BQ9ULI0 1458 aa5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 RBM19Q9Y4C8 960 aaKnown RBP5.61□□□□□ -1.51
AC055720.1-201ENST00000539552 KIAA1324LA8MWY0 1029 aaPredicted RBP5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 WNT11O96014 354 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 TGFB1P01137 390 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 SKIP12755 728 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 RFX1P22670 979 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 B4GALNT3Q6L9W6 998 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 BTLAQ7Z6A9 289 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 DZIP1LQ8IYY4 767 aaKnown RBP5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 NAGPAQ9UK23 515 aa5.6□□□□□ -1.51
AC055720.1-201ENST00000539552 PPRC1Q5VV67 1664 aaKnown RBP5.59□□□□□ -1.51
AC055720.1-201ENST00000539552 DHX15O43143 795 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms