RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ALDH1L1O75891 902 aa19.98■□□□□ 0.79
RPAIN-206ENST00000539417 EPHA10Q5JZY3 1008 aa19.98■□□□□ 0.79
RPAIN-206ENST00000539417 PPEF1O14829 653 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-206ENST00000539417 NBPF7P0C2Y1 421 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-206ENST00000539417 YY1P25490 414 aa19.97■□□□□ 0.79
RPAIN-206ENST00000539417 GRAPQ13588 217 aa19.97■□□□□ 0.79
RPAIN-206ENST00000539417 DDX46Q7L014 1031 aaKnown RBP19.97■□□□□ 0.79
RPAIN-206ENST00000539417 TTLL11Q8NHH1 800 aa19.97■□□□□ 0.79
RPAIN-206ENST00000539417 GRAPLQ8TC17 118 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-206ENST00000539417 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-206ENST00000539417 GRM8O00222 908 aa19.96■□□□□ 0.79
RPAIN-206ENST00000539417 CTSWP56202 376 aa19.96■□□□□ 0.79
RPAIN-206ENST00000539417 KAZALD1Q96I82 304 aa19.96■□□□□ 0.79
RPAIN-206ENST00000539417 MYH3P11055 1940 aa19.96■□□□□ 0.79
RPAIN-206ENST00000539417 FOXO4P98177 505 aa19.95■□□□□ 0.78
RPAIN-206ENST00000539417 PLA2G12BQ9BX93 195 aa19.95■□□□□ 0.78
RPAIN-206ENST00000539417 GREM2Q9H772 168 aa19.95■□□□□ 0.78
RPAIN-206ENST00000539417 KIF16BQ96L93 1317 aa19.95■□□□□ 0.78
RPAIN-206ENST00000539417 CCDC88AQ3V6T2 1871 aa19.94■□□□□ 0.78
RPAIN-206ENST00000539417 TRIM27P14373 513 aa19.94■□□□□ 0.78
RPAIN-206ENST00000539417 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
RPAIN-206ENST00000539417 C9orf131Q5VYM1 1079 aa19.94■□□□□ 0.78
RPAIN-206ENST00000539417 SUCLG2Q96I99 432 aa19.94■□□□□ 0.78
RPAIN-206ENST00000539417 API5Q9BZZ5 524 aaKnown RBP19.94■□□□□ 0.78
RPAIN-206ENST00000539417 ARHGAP45Q92619 1136 aa19.93■□□□□ 0.78
RPAIN-206ENST00000539417 USP44Q9H0E7 712 aa19.93■□□□□ 0.78
RPAIN-206ENST00000539417 C9orf78Q9NZ63 289 aaPredicted RBP19.93■□□□□ 0.78
RPAIN-206ENST00000539417 ATP6V0A2Q9Y487 856 aa19.93■□□□□ 0.78
RPAIN-206ENST00000539417 CSF1RP07333 972 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 FAM161AQ3B820 660 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 CCDC152Q4G0S7 254 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 CLUAP1Q96AJ1 413 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 UTYO14607 1347 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 BBOX1O75936 387 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 ATF7IPQ6VMQ6 1270 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 RNF181Q9P0P0 153 aa19.92■□□□□ 0.78
RPAIN-206ENST00000539417 SPEF2Q9C093 1822 aa19.91■□□□□ 0.78
RPAIN-206ENST00000539417 LRRC37AA6NMS7 1700 aa19.91■□□□□ 0.78
RPAIN-206ENST00000539417 HSP90B1P14625 803 aaKnown RBP19.91■□□□□ 0.78
RPAIN-206ENST00000539417 RPS8P62241 208 aaKnown RBP19.91■□□□□ 0.78
RPAIN-206ENST00000539417 TAOK3Q9H2K8 898 aa19.91■□□□□ 0.78
RPAIN-206ENST00000539417 ZNF277Q9NRM2 450 aaPredicted RBP19.91■□□□□ 0.78
RPAIN-206ENST00000539417 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
RPAIN-206ENST00000539417 SOGA3Q5TF21 947 aa19.9■□□□□ 0.78
RPAIN-206ENST00000539417 LMBR1LQ6UX01 489 aa19.9■□□□□ 0.78
RPAIN-206ENST00000539417 SP8Q8IXZ3 490 aa19.9■□□□□ 0.78
RPAIN-206ENST00000539417 COL4A5P29400 1685 aa19.9■□□□□ 0.78
RPAIN-206ENST00000539417 LTBP3Q9NS15 1303 aa19.9■□□□□ 0.78
RPAIN-206ENST00000539417 RLBP1P12271 317 aa19.89■□□□□ 0.77
RPAIN-206ENST00000539417 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.77
RPAIN-206ENST00000539417 ZKSCAN2Q63HK3 967 aa19.89■□□□□ 0.77
RPAIN-206ENST00000539417 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
RPAIN-206ENST00000539417 DUOX1Q9NRD9 1551 aa19.89■□□□□ 0.77
RPAIN-206ENST00000539417 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
RPAIN-206ENST00000539417 IPO8O15397 1037 aaKnown RBP19.88■□□□□ 0.77
RPAIN-206ENST00000539417 LMNB1P20700 586 aa19.88■□□□□ 0.77
RPAIN-206ENST00000539417 ITGA6P23229 1130 aa19.88■□□□□ 0.77
RPAIN-206ENST00000539417 RTKN2Q8IZC4 609 aa19.88■□□□□ 0.77
RPAIN-206ENST00000539417 ANKRD44Q8N8A2 993 aa19.88■□□□□ 0.77
RPAIN-206ENST00000539417 RCAN3Q9UKA8 241 aa19.88■□□□□ 0.77
RPAIN-206ENST00000539417 GPSM2P81274 684 aa19.87■□□□□ 0.77
RPAIN-206ENST00000539417 TMEM57Q8N5G2 664 aa19.87■□□□□ 0.77
RPAIN-206ENST00000539417 MEIS3Q99687 375 aa19.87■□□□□ 0.77
RPAIN-206ENST00000539417 BICC1Q9H694 974 aaKnown RBP19.87■□□□□ 0.77
RPAIN-206ENST00000539417 TIAM2Q8IVF5 1701 aa19.87■□□□□ 0.77
RPAIN-206ENST00000539417 WTIPA6NIX2 430 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-206ENST00000539417 CC2D2BQ6DHV5 1058 aa19.86■□□□□ 0.77
RPAIN-206ENST00000539417 ZNF784Q8NCA9 323 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-206ENST00000539417 CHMP3Q9Y3E7 222 aa19.86■□□□□ 0.77
RPAIN-206ENST00000539417 LTBP1Q14766 1721 aa19.86■□□□□ 0.77
RPAIN-206ENST00000539417 PLIN1O60240 522 aa19.86■□□□□ 0.77
RPAIN-206ENST00000539417 ANKRD18AQ8IVF6 992 aa19.86■□□□□ 0.77
RPAIN-206ENST00000539417 ZNF594Q96JF6 807 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-206ENST00000539417 GPR101Q96P66 508 aaPredicted RBP19.86■□□□□ 0.77
RPAIN-206ENST00000539417 PSMD1Q99460 953 aa19.86■□□□□ 0.77
RPAIN-206ENST00000539417 DICER1Q9UPY3 1922 aaKnown RBP19.86■□□□□ 0.77
RPAIN-206ENST00000539417 MPNDQ8N594 471 aa19.85■□□□□ 0.77
RPAIN-206ENST00000539417 ZNF526Q8TF50 670 aaPredicted RBP19.85■□□□□ 0.77
RPAIN-206ENST00000539417 IARSP41252 1262 aaKnown RBP19.84■□□□□ 0.77
RPAIN-206ENST00000539417 RABL6Q3YEC7 729 aaPredicted RBP19.84■□□□□ 0.77
RPAIN-206ENST00000539417 DPP8Q6V1X1 898 aaPredicted RBP19.84■□□□□ 0.77
RPAIN-206ENST00000539417 CDC5LQ99459 802 aaKnown RBP19.84■□□□□ 0.77
RPAIN-206ENST00000539417 TMC4Q7Z404 712 aa19.83■□□□□ 0.76
RPAIN-206ENST00000539417 PANK1Q8TE04 598 aa19.83■□□□□ 0.76
RPAIN-206ENST00000539417 RTFDC1Q9BY42 306 aaPredicted RBP19.83■□□□□ 0.76
RPAIN-206ENST00000539417 POLLQ9UGP5 575 aa19.83■□□□□ 0.76
RPAIN-206ENST00000539417 NSFL1CQ9UNZ2 370 aaKnown RBP19.83■□□□□ 0.76
RPAIN-206ENST00000539417 ANKRD18BA2A2Z9 1011 aa19.82■□□□□ 0.76
RPAIN-206ENST00000539417 DZIP1LQ8IYY4 767 aaKnown RBP19.82■□□□□ 0.76
RPAIN-206ENST00000539417 MINPP1Q9UNW1 487 aa19.82■□□□□ 0.76
RPAIN-206ENST00000539417 UBTFL1P0CB47 393 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-206ENST00000539417 IFIT5Q13325 482 aaKnown RBP19.81■□□□□ 0.76
RPAIN-206ENST00000539417 AOC3Q16853 763 aa19.81■□□□□ 0.76
RPAIN-206ENST00000539417 BSDC1Q9NW68 430 aaPredicted RBP19.81■□□□□ 0.76
RPAIN-206ENST00000539417 LRRFIP2Q9Y608 721 aaKnown RBP19.81■□□□□ 0.76
RPAIN-206ENST00000539417 KLHDC4Q8TBB5 520 aa19.8■□□□□ 0.76
RPAIN-206ENST00000539417 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
RPAIN-206ENST00000539417 TMX4Q9H1E5 349 aaPredicted RBP19.8■□□□□ 0.76
RPAIN-206ENST00000539417 IGHMBP2P38935 993 aaKnown RBP19.79■□□□□ 0.76
RPAIN-206ENST00000539417 GRIPAP1Q4V328 841 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms