RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMC4Q7Z404 712 aa28.63■■■□□ 2.17
SCARB1-206ENST00000539320 MYD88Q99836 296 aa28.63■■■□□ 2.17
SCARB1-206ENST00000539320 RTFDC1Q9BY42 306 aaPredicted RBP28.63■■■□□ 2.17
SCARB1-206ENST00000539320 VPS33BQ9H267 617 aa28.63■■■□□ 2.17
SCARB1-206ENST00000539320 IL16Q14005 1332 aa28.63■■■□□ 2.17
SCARB1-206ENST00000539320 TAF1P21675 1872 aa28.62■■■□□ 2.17
SCARB1-206ENST00000539320 DDX58O95786 925 aaKnown RBP28.62■■■□□ 2.17
SCARB1-206ENST00000539320 SF3B3Q15393 1217 aaKnown RBP28.62■■■□□ 2.17
SCARB1-206ENST00000539320 EAPPQ56P03 285 aaPredicted RBP28.62■■■□□ 2.17
SCARB1-206ENST00000539320 RTL5Q5HYW3 569 aaPredicted RBP28.62■■■□□ 2.17
SCARB1-206ENST00000539320 GJA3Q9Y6H8 435 aa28.62■■■□□ 2.17
SCARB1-206ENST00000539320 ADAMTSL1Q8N6G6 1762 aa28.61■■■□□ 2.17
SCARB1-206ENST00000539320 IRS4O14654 1257 aaPredicted RBP28.61■■■□□ 2.17
SCARB1-206ENST00000539320 MPNDQ8N594 471 aa28.61■■■□□ 2.17
SCARB1-206ENST00000539320 ZBTB38Q8NAP3 1195 aaPredicted RBP28.6■■■□□ 2.17
SCARB1-206ENST00000539320 DUOX1Q9NRD9 1551 aa28.59■■■□□ 2.17
SCARB1-206ENST00000539320 STK31Q9BXU1 1019 aa28.59■■■□□ 2.17
SCARB1-206ENST00000539320 LMOD1P29536 600 aaPredicted RBP28.58■■■□□ 2.17
SCARB1-206ENST00000539320 PNMA8AQ86V59 439 aaPredicted RBP28.58■■■□□ 2.17
SCARB1-206ENST00000539320 JMYQ8N9B5 988 aa28.58■■■□□ 2.17
SCARB1-206ENST00000539320 CCDC191Q8NCU4 936 aa28.58■■■□□ 2.17
SCARB1-206ENST00000539320 CELF1Q92879 486 aaKnown RBP28.58■■■□□ 2.17
SCARB1-206ENST00000539320 METTL22Q9BUU2 404 aaPredicted RBP28.58■■■□□ 2.17
SCARB1-206ENST00000539320 LTBP1Q14766 1721 aa28.57■■■□□ 2.16
SCARB1-206ENST00000539320 HSP90B1P14625 803 aaKnown RBP28.57■■■□□ 2.16
SCARB1-206ENST00000539320 TWISTNBQ3B726 338 aaPredicted RBP28.57■■■□□ 2.16
SCARB1-206ENST00000539320 CWC25Q9NXE8 425 aaPredicted RBP28.57■■■□□ 2.16
SCARB1-206ENST00000539320 COL4A1P02462 1669 aa28.56■■■□□ 2.16
SCARB1-206ENST00000539320 KIAA2012Q0VF49 1180 aa28.56■■■□□ 2.16
SCARB1-206ENST00000539320 PASKQ96RG2 1323 aa28.55■■■□□ 2.16
SCARB1-206ENST00000539320 FANCIQ9NVI1 1328 aa28.55■■■□□ 2.16
SCARB1-206ENST00000539320 PCCAP05165 728 aaPredicted RBP28.55■■■□□ 2.16
SCARB1-206ENST00000539320 SCNN1DP51172 638 aa28.55■■■□□ 2.16
SCARB1-206ENST00000539320 ZNRF3Q9ULT6 936 aa28.55■■■□□ 2.16
SCARB1-206ENST00000539320 CLEC11AQ9Y240 323 aa28.55■■■□□ 2.16
SCARB1-206ENST00000539320 MAP3K2Q9Y2U5 619 aa28.55■■■□□ 2.16
SCARB1-206ENST00000539320 CREBZFQ9NS37 354 aa28.54■■■□□ 2.16
SCARB1-206ENST00000539320 KSR2Q6VAB6 950 aa28.53■■■□□ 2.16
SCARB1-206ENST00000539320 SALL2Q9Y467 1007 aaPredicted RBP28.52■■■□□ 2.16
SCARB1-206ENST00000539320 PI4KAP2A4QPH2 592 aa28.51■■■□□ 2.15
SCARB1-206ENST00000539320 WDR63Q8IWG1 891 aa28.51■■■□□ 2.15
SCARB1-206ENST00000539320 PI4KAP1Q8N8J0 262 aa28.51■■■□□ 2.15
SCARB1-206ENST00000539320 EPS15P42566 896 aa28.5■■■□□ 2.15
SCARB1-206ENST00000539320 CXCL9Q07325 125 aa28.5■■■□□ 2.15
SCARB1-206ENST00000539320 CCDC152Q4G0S7 254 aa28.5■■■□□ 2.15
SCARB1-206ENST00000539320 PDE8AO60658 829 aa28.49■■■□□ 2.15
SCARB1-206ENST00000539320 ITGBL1O95965 494 aaPredicted RBP28.49■■■□□ 2.15
SCARB1-206ENST00000539320 RPS8P62241 208 aaKnown RBP28.49■■■□□ 2.15
SCARB1-206ENST00000539320 NEXNQ0ZGT2 675 aa28.49■■■□□ 2.15
SCARB1-206ENST00000539320 JARID2Q92833 1246 aaPredicted RBP28.49■■■□□ 2.15
SCARB1-206ENST00000539320 NSFL1CQ9UNZ2 370 aaKnown RBP28.49■■■□□ 2.15
SCARB1-206ENST00000539320 CDHR2Q9BYE9 1310 aa28.48■■■□□ 2.15
SCARB1-206ENST00000539320 IGKV5-2P06315 115 aa28.48■■■□□ 2.15
SCARB1-206ENST00000539320 MAP1SQ66K74 1059 aaPredicted RBP28.48■■■□□ 2.15
SCARB1-206ENST00000539320 CIAPIN1Q6FI81 312 aa28.48■■■□□ 2.15
SCARB1-206ENST00000539320 G2E3Q7L622 706 aa28.48■■■□□ 2.15
SCARB1-206ENST00000539320 SEC31BQ9NQW1 1179 aa28.48■■■□□ 2.15
SCARB1-206ENST00000539320 SLC4A2P04920 1241 aa28.47■■■□□ 2.15
SCARB1-206ENST00000539320 GPSM2P81274 684 aa28.47■■■□□ 2.15
SCARB1-206ENST00000539320 CNTROBQ8N137 903 aa28.47■■■□□ 2.15
SCARB1-206ENST00000539320 GPRC5DQ9NZD1 345 aa28.47■■■□□ 2.15
SCARB1-206ENST00000539320 USP50Q70EL3 339 aaPredicted RBP28.46■■■□□ 2.15
SCARB1-206ENST00000539320 FAM9BQ8IZU0 186 aa28.46■■■□□ 2.15
SCARB1-206ENST00000539320 RAD17O75943 681 aa28.45■■■□□ 2.14
SCARB1-206ENST00000539320 GMPSP49915 693 aaPredicted RBP28.45■■■□□ 2.14
SCARB1-206ENST00000539320 FLIIQ13045 1269 aa28.45■■■□□ 2.14
SCARB1-206ENST00000539320 WASHC4Q2M389 1173 aa28.45■■■□□ 2.14
SCARB1-206ENST00000539320 CACNA1FO60840 1977 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 TMEM88BA6NKF7 163 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 YDJCA8MPS7 323 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 C6orf229H3BNL8 230 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 TNIP1Q15025 636 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 CCDC85AQ96PX6 553 aaPredicted RBP28.44■■■□□ 2.14
SCARB1-206ENST00000539320 EYA3Q99504 573 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 ADARB2Q9NS39 739 aaKnown RBP28.44■■■□□ 2.14
SCARB1-206ENST00000539320 POLLQ9UGP5 575 aa28.44■■■□□ 2.14
SCARB1-206ENST00000539320 MKRN1Q9UHC7 482 aaKnown RBP28.44■■■□□ 2.14
SCARB1-206ENST00000539320 CNTNAP1P78357 1384 aa28.43■■■□□ 2.14
SCARB1-206ENST00000539320 NEURL1BA8MQ27 555 aa28.43■■■□□ 2.14
SCARB1-206ENST00000539320 CTSWP56202 376 aa28.43■■■□□ 2.14
SCARB1-206ENST00000539320 CWF19L2Q2TBE0 894 aaKnown RBP28.43■■■□□ 2.14
SCARB1-206ENST00000539320 BCL2L13Q9BXK5 485 aa28.43■■■□□ 2.14
SCARB1-206ENST00000539320 EXOSC9Q06265 439 aaKnown RBP28.42■■■□□ 2.14
SCARB1-206ENST00000539320 TBC1D16Q8TBP0 767 aa28.42■■■□□ 2.14
SCARB1-206ENST00000539320 MYH3P11055 1940 aa28.41■■■□□ 2.14
SCARB1-206ENST00000539320 RIMBP2O15034 1052 aa28.41■■■□□ 2.14
SCARB1-206ENST00000539320 VAMP4O75379 141 aa28.41■■■□□ 2.14
SCARB1-206ENST00000539320 FKBP5Q13451 457 aaPredicted RBP28.41■■■□□ 2.14
SCARB1-206ENST00000539320 DBNDD1Q9H9R9 158 aa28.41■■■□□ 2.14
SCARB1-206ENST00000539320 PODXL2Q9NZ53 605 aa28.41■■■□□ 2.14
SCARB1-206ENST00000539320 ANKRD18AQ8IVF6 992 aa28.4■■■□□ 2.14
SCARB1-206ENST00000539320 GPR101Q96P66 508 aaPredicted RBP28.4■■■□□ 2.14
SCARB1-206ENST00000539320 SPINK5Q9NQ38 1064 aaPredicted RBP28.4■■■□□ 2.14
SCARB1-206ENST00000539320 UFL1O94874 794 aa28.39■■■□□ 2.14
SCARB1-206ENST00000539320 DNAAF4Q8WXU2 420 aa28.39■■■□□ 2.14
SCARB1-206ENST00000539320 MYH16Q9H6N6 1097 aa28.39■■■□□ 2.14
SCARB1-206ENST00000539320 ECE2O60344 883 aa28.38■■■□□ 2.13
SCARB1-206ENST00000539320 CDC5LQ99459 802 aaKnown RBP28.38■■■□□ 2.13
SCARB1-206ENST00000539320 ANKIB1Q9P2G1 1089 aa28.38■■■□□ 2.13
SCARB1-206ENST00000539320 GGA1Q9UJY5 639 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms