RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 SETD1AO15047 1707 aaKnown RBP7.42□□□□□ -1.22
KNTC1-210ENST00000539013 BCAR3O75815 825 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 U2AF1L5P0DN76 240 aaPredicted RBP7.42□□□□□ -1.22
KNTC1-210ENST00000539013 ITGA6P23229 1130 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 RARSP54136 660 aaKnown RBP7.42□□□□□ -1.22
KNTC1-210ENST00000539013 U2AF1Q01081 240 aaKnown RBP eCLIP7.42□□□□□ -1.22
KNTC1-210ENST00000539013 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 GPR161Q8N6U8 529 aaKnown RBP7.42□□□□□ -1.22
KNTC1-210ENST00000539013 CLUAP1Q96AJ1 413 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 CDK19Q9BWU1 502 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 ZNF395Q9H8N7 513 aaPredicted RBP7.42□□□□□ -1.22
KNTC1-210ENST00000539013 STK26Q9P289 416 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 MAPK8IP3Q9UPT6 1336 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 TECPR2O15040 1411 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 FAM135BQ49AJ0 1406 aa7.42□□□□□ -1.22
KNTC1-210ENST00000539013 KNDC1Q76NI1 1749 aa7.41□□□□□ -1.22
KNTC1-210ENST00000539013 FYB1O15117 783 aa7.41□□□□□ -1.22
KNTC1-210ENST00000539013 CANXP27824 592 aaKnown RBP7.41□□□□□ -1.22
KNTC1-210ENST00000539013 ADD1P35611 737 aaKnown RBP7.41□□□□□ -1.22
KNTC1-210ENST00000539013 TNNT2P45379 298 aaPredicted RBP7.41□□□□□ -1.22
KNTC1-210ENST00000539013 RAB15P59190 212 aa7.41□□□□□ -1.22
KNTC1-210ENST00000539013 SV2AQ7L0J3 742 aa7.41□□□□□ -1.22
KNTC1-210ENST00000539013 ZNF330Q9Y3S2 320 aaPredicted RBP7.41□□□□□ -1.22
KNTC1-210ENST00000539013 KIF20BQ96Q89 1820 aa7.41□□□□□ -1.22
KNTC1-210ENST00000539013 RNF144AP50876 292 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-210ENST00000539013 KRT76Q01546 638 aa7.4□□□□□ -1.22
KNTC1-210ENST00000539013 FOXD4L5Q5VV16 416 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-210ENST00000539013 KDF1Q8NAX2 398 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-210ENST00000539013 ZNF428Q96B54 188 aa7.4□□□□□ -1.22
KNTC1-210ENST00000539013 CNTNAP3BQ96NU0 1288 aa7.4□□□□□ -1.22
KNTC1-210ENST00000539013 PLEKHF1Q96S99 279 aa7.4□□□□□ -1.22
KNTC1-210ENST00000539013 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
KNTC1-210ENST00000539013 CNTNAP3Q9BZ76 1288 aa7.4□□□□□ -1.22
KNTC1-210ENST00000539013 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
KNTC1-210ENST00000539013 EDC4Q6P2E9 1401 aaKnown RBP7.4□□□□□ -1.22
KNTC1-210ENST00000539013 CPS1P31327 1500 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 CPSF1Q10570 1443 aaKnown RBP7.39□□□□□ -1.23
KNTC1-210ENST00000539013 AATKQ6ZMQ8 1374 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 DIAPH1O60610 1272 aaKnown RBP7.39□□□□□ -1.23
KNTC1-210ENST00000539013 FBXO45P0C2W1 286 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 GPC1P35052 558 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 TMPOP42166 694 aaKnown RBP7.39□□□□□ -1.23
KNTC1-210ENST00000539013 SAFB2Q14151 953 aaKnown RBP eCLIP7.39□□□□□ -1.23
KNTC1-210ENST00000539013 LYSMD3Q7Z3D4 306 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 GGNBP2Q9H3C7 697 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 ESF1Q9H501 851 aaKnown RBP7.39□□□□□ -1.23
KNTC1-210ENST00000539013 SNRKQ9NRH2 765 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 PCDHB9Q9Y5E1 797 aa7.39□□□□□ -1.23
KNTC1-210ENST00000539013 NRXN3Q9Y4C0 1643 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 ATP5J2-PTCD1G3V325 749 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 WASLO00401 505 aaPredicted RBP7.38□□□□□ -1.23
KNTC1-210ENST00000539013 PPM1GO15355 546 aaPredicted RBP7.38□□□□□ -1.23
KNTC1-210ENST00000539013 GIGYF1O75420 1035 aaPredicted RBP7.38□□□□□ -1.23
KNTC1-210ENST00000539013 NEFMP07197 916 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 CALD1Q05682 793 aaKnown RBP7.38□□□□□ -1.23
KNTC1-210ENST00000539013 KCNMA1Q12791 1236 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 NR1H3Q13133 447 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 GMCL1Q96IK5 515 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 CABP1Q9NZU7 370 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 USP35Q9P2H5 1018 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 RRP7AQ9Y3A4 280 aaKnown RBP7.38□□□□□ -1.23
KNTC1-210ENST00000539013 TSPOAP1O95153 1857 aa7.38□□□□□ -1.23
KNTC1-210ENST00000539013 CDK12Q9NYV4 1490 aaPredicted RBP7.37□□□□□ -1.23
KNTC1-210ENST00000539013 PPIP5K1Q6PFW1 1433 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 TNRQ92752 1358 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 KIF16BQ96L93 1317 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 U2SURPO15042 1029 aaKnown RBP7.37□□□□□ -1.23
KNTC1-210ENST00000539013 ERVK-9P63128 1117 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 ZKSCAN2Q63HK3 967 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 VWA5B2Q8N398 1253 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 CYLDQ9NQC7 956 aa7.37□□□□□ -1.23
KNTC1-210ENST00000539013 CDC14CA4D256 554 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 RNF225M0QZC1 329 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 SLURP2P0DP57 97 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 MCM6Q14566 821 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 MVPQ14764 893 aaKnown RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 NPM2Q86SE8 214 aaKnown RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 DZIP1LQ8IYY4 767 aaKnown RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 MTMR14Q8NCE2 650 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 PANK1Q8TE04 598 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 FRAT1Q92837 279 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 CHMP4BQ9H444 224 aaKnown RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 RWDD1Q9H446 243 aaPredicted RBP7.36□□□□□ -1.23
KNTC1-210ENST00000539013 DDX19BQ9UMR2 479 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 COG6Q9Y2V7 657 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 KIF13AQ9H1H9 1805 aa7.36□□□□□ -1.23
KNTC1-210ENST00000539013 TMEM2Q9UHN6 1383 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 IPO8O15397 1037 aaKnown RBP7.35□□□□□ -1.23
KNTC1-210ENST00000539013 IGHDP01880 384 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 RIPK4P57078 832 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 LMOD3Q0VAK6 560 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 CYP2U1Q7Z449 544 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 FTSJ3Q8IY81 847 aaKnown RBP7.35□□□□□ -1.23
KNTC1-210ENST00000539013 POLKQ9UBT6 870 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 VIRMAQ69YN4 1812 aaKnown RBP7.35□□□□□ -1.23
KNTC1-210ENST00000539013 LRRC7Q96NW7 1537 aa7.35□□□□□ -1.23
KNTC1-210ENST00000539013 MON2Q7Z3U7 1717 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms