RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 BBOX1O75936 387 aa16.29■□□□□ 0.2
VAMP1-206ENST00000538970 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-206ENST00000538970 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-206ENST00000538970 AOC3Q16853 763 aa16.29■□□□□ 0.2
VAMP1-206ENST00000538970 PLBD2Q8NHP8 589 aa16.29■□□□□ 0.2
VAMP1-206ENST00000538970 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
VAMP1-206ENST00000538970 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
VAMP1-206ENST00000538970 THSD7BQ9C0I4 1608 aa16.29■□□□□ 0.2
VAMP1-206ENST00000538970 DDX60Q8IY21 1712 aaKnown RBP16.28■□□□□ 0.2
VAMP1-206ENST00000538970 GRAPQ13588 217 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
VAMP1-206ENST00000538970 SP8Q8IXZ3 490 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 CNTROBQ8N137 903 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 SUPT20HQ8NEM7 779 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
VAMP1-206ENST00000538970 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 DUOX1Q9NRD9 1551 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 LRRC37AA6NMS7 1700 aa16.28■□□□□ 0.2
VAMP1-206ENST00000538970 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
VAMP1-206ENST00000538970 EPS15P42566 896 aa16.27■□□□□ 0.2
VAMP1-206ENST00000538970 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
VAMP1-206ENST00000538970 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
VAMP1-206ENST00000538970 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.2
VAMP1-206ENST00000538970 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
VAMP1-206ENST00000538970 HYPKQ9NX55 129 aa16.27■□□□□ 0.2
VAMP1-206ENST00000538970 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
VAMP1-206ENST00000538970 MPNDQ8N594 471 aa16.26■□□□□ 0.19
VAMP1-206ENST00000538970 ZNRF3Q9ULT6 936 aa16.26■□□□□ 0.19
VAMP1-206ENST00000538970 APAF1O14727 1248 aa16.25■□□□□ 0.19
VAMP1-206ENST00000538970 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
VAMP1-206ENST00000538970 USP50Q70EL3 339 aaPredicted RBP16.25■□□□□ 0.19
VAMP1-206ENST00000538970 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
VAMP1-206ENST00000538970 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 CXCL9Q07325 125 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 GRM1Q13255 1194 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 TMC4Q7Z404 712 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 FAM89AQ96GI7 184 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 GPRC5DQ9NZD1 345 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 COL4A1P02462 1669 aa16.24■□□□□ 0.19
VAMP1-206ENST00000538970 GNAI1P63096 354 aa16.23■□□□□ 0.19
VAMP1-206ENST00000538970 CALD1Q05682 793 aaKnown RBP16.23■□□□□ 0.19
VAMP1-206ENST00000538970 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
VAMP1-206ENST00000538970 CYP4F22Q6NT55 531 aa16.23■□□□□ 0.19
VAMP1-206ENST00000538970 CAPNS2Q96L46 248 aa16.23■□□□□ 0.19
VAMP1-206ENST00000538970 ADARB2Q9NS39 739 aaKnown RBP16.23■□□□□ 0.19
VAMP1-206ENST00000538970 CDHR2Q9BYE9 1310 aa16.22■□□□□ 0.19
VAMP1-206ENST00000538970 TRIM28Q13263 835 aaKnown RBP16.22■□□□□ 0.19
VAMP1-206ENST00000538970 CELF1Q92879 486 aaKnown RBP16.22■□□□□ 0.19
VAMP1-206ENST00000538970 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
VAMP1-206ENST00000538970 TAF1P21675 1872 aa16.22■□□□□ 0.19
VAMP1-206ENST00000538970 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-206ENST00000538970 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
VAMP1-206ENST00000538970 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-206ENST00000538970 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
VAMP1-206ENST00000538970 PAXIP1Q6ZW49 1069 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-206ENST00000538970 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
VAMP1-206ENST00000538970 YDJCA8MPS7 323 aa16.2■□□□□ 0.18
VAMP1-206ENST00000538970 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-206ENST00000538970 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-206ENST00000538970 RAD17O75943 681 aa16.2■□□□□ 0.18
VAMP1-206ENST00000538970 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
VAMP1-206ENST00000538970 GPR101Q96P66 508 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-206ENST00000538970 TRAF5O00463 557 aa16.19■□□□□ 0.18
VAMP1-206ENST00000538970 AOC2O75106 756 aa16.19■□□□□ 0.18
VAMP1-206ENST00000538970 TNIP1Q15025 636 aa16.19■□□□□ 0.18
VAMP1-206ENST00000538970 ZBTB38Q8NAP3 1195 aaPredicted RBP16.19■□□□□ 0.18
VAMP1-206ENST00000538970 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
VAMP1-206ENST00000538970 BEGAINQ9BUH8 593 aa16.19■□□□□ 0.18
VAMP1-206ENST00000538970 MYD88Q99836 296 aa16.18■□□□□ 0.18
VAMP1-206ENST00000538970 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
VAMP1-206ENST00000538970 GPSM2P81274 684 aa16.17■□□□□ 0.18
VAMP1-206ENST00000538970 WASHC4Q2M389 1173 aa16.17■□□□□ 0.18
VAMP1-206ENST00000538970 CST9Q5W186 159 aa16.17■□□□□ 0.18
VAMP1-206ENST00000538970 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
VAMP1-206ENST00000538970 CCDC191Q8NCU4 936 aa16.16■□□□□ 0.18
VAMP1-206ENST00000538970 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
VAMP1-206ENST00000538970 POLLQ9UGP5 575 aa16.16■□□□□ 0.18
VAMP1-206ENST00000538970 PGAP2Q9UHJ9 254 aa16.16■□□□□ 0.18
VAMP1-206ENST00000538970 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
VAMP1-206ENST00000538970 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-206ENST00000538970 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
VAMP1-206ENST00000538970 ECE1P42892 770 aa16.15■□□□□ 0.18
VAMP1-206ENST00000538970 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-206ENST00000538970 RPS8P62241 208 aaKnown RBP16.15■□□□□ 0.18
VAMP1-206ENST00000538970 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
VAMP1-206ENST00000538970 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
VAMP1-206ENST00000538970 TRPM4Q8TD43 1214 aa16.15■□□□□ 0.18
VAMP1-206ENST00000538970 ZC3H15Q8WU90 426 aaKnown RBP16.15■□□□□ 0.18
VAMP1-206ENST00000538970 METTL22Q9BUU2 404 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-206ENST00000538970 TLL2Q9Y6L7 1015 aa16.15■□□□□ 0.18
VAMP1-206ENST00000538970 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 RIMBP2O15034 1052 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
VAMP1-206ENST00000538970 DGKZQ13574 1117 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 MICALL2Q8IY33 904 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
VAMP1-206ENST00000538970 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms