RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
CPNE8-203ENST00000538596 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 UBE2Q2Q8WVN8 375 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 FUCA2Q9BTY2 467 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 TTC12Q9H892 705 aaPredicted RBP14.26□□□□□ -0.13
CPNE8-203ENST00000538596 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 CYP27B1O15528 508 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 AP5Z1O43299 807 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 RRP9O43818 475 aaKnown RBP14.25□□□□□ -0.13
CPNE8-203ENST00000538596 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 STRCP1A6NGW2 1772 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 MCM5P33992 734 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 CAMK4Q16566 473 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 DBNDD2Q9BQY9 259 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
CPNE8-203ENST00000538596 ADAMTS7Q9UKP4 1686 aa14.25□□□□□ -0.13
CPNE8-203ENST00000538596 RNF20Q5VTR2 975 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 LIG1P18858 919 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 UVSSAQ2YD98 709 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
CPNE8-203ENST00000538596 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 COPRSQ9NQ92 184 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 SCN11AQ9UI33 1791 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 A0A087WZG4 1122 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 JAK2O60674 1132 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 LETM1O95202 739 aaPredicted RBP14.24□□□□□ -0.13
CPNE8-203ENST00000538596 SNRPA1P09661 255 aaKnown RBP14.24□□□□□ -0.13
CPNE8-203ENST00000538596 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
CPNE8-203ENST00000538596 UQCRHLA0A096LP55 91 aa14.23□□□□□ -0.13
CPNE8-203ENST00000538596 UQCRHP07919 91 aa14.23□□□□□ -0.13
CPNE8-203ENST00000538596 KDM4AO75164 1064 aa14.23□□□□□ -0.13
CPNE8-203ENST00000538596 ATP5JP18859 108 aa14.23□□□□□ -0.13
CPNE8-203ENST00000538596 KRT85P78386 507 aa14.22□□□□□ -0.13
CPNE8-203ENST00000538596 KIAA2012Q0VF49 1180 aa14.22□□□□□ -0.13
CPNE8-203ENST00000538596 DDX11Q96FC9 970 aa14.22□□□□□ -0.13
CPNE8-203ENST00000538596 ZNF609O15014 1411 aa14.22□□□□□ -0.13
CPNE8-203ENST00000538596 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
CPNE8-203ENST00000538596 TMEM94Q12767 1356 aa14.22□□□□□ -0.13
CPNE8-203ENST00000538596 LMBR1LQ6UX01 489 aa14.21□□□□□ -0.13
CPNE8-203ENST00000538596 C19orf44Q9H6X5 657 aa14.21□□□□□ -0.13
CPNE8-203ENST00000538596 MRC1P22897 1456 aa14.21□□□□□ -0.13
CPNE8-203ENST00000538596 CKAP2LQ8IYA6 745 aa14.21□□□□□ -0.13
CPNE8-203ENST00000538596 FMNL2Q96PY5 1086 aa14.21□□□□□ -0.13
CPNE8-203ENST00000538596 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
CPNE8-203ENST00000538596 JCADQ9P266 1359 aa14.21□□□□□ -0.14
CPNE8-203ENST00000538596 AFDNP55196 1824 aaKnown RBP14.21□□□□□ -0.14
CPNE8-203ENST00000538596 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 CYP21A2P08686 494 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 Q6ZUG5 572 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 CABP4P57796 275 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 RABL6Q3YEC7 729 aaPredicted RBP14.2□□□□□ -0.14
CPNE8-203ENST00000538596 USPL1Q5W0Q7 1092 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 NEK1Q96PY6 1258 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 FOSBP53539 338 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 SPC24Q8NBT2 197 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 NEUROD6Q96NK8 337 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
CPNE8-203ENST00000538596 HSP90B1P14625 803 aaKnown RBP14.19□□□□□ -0.14
CPNE8-203ENST00000538596 PDCP20941 246 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 TERF1P54274 439 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 CASP7P55210 303 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 TIMM10P62072 90 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 TSGA10IPQ3SY00 556 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 DNTTIP2Q5QJE6 756 aaKnown RBP14.19□□□□□ -0.14
CPNE8-203ENST00000538596 STOX1Q6ZVD7 989 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 DACT1Q9NYF0 836 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
CPNE8-203ENST00000538596 TTLL7Q6ZT98 887 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 SPATA32Q96LK8 384 aa14.19□□□□□ -0.14
CPNE8-203ENST00000538596 ALS2Q96Q42 1657 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 BRF1Q92994 677 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 GTF3C6Q969F1 213 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 HAUS7Q99871 368 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 GOLIM4O00461 696 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 CCDC192P0DO97 292 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 MCMDC2Q4G0Z9 681 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
CPNE8-203ENST00000538596 NUP62CLQ9H1M0 184 aa14.18□□□□□ -0.14
CPNE8-203ENST00000538596 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
CPNE8-203ENST00000538596 ATF3P18847 181 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 FOXO4P98177 505 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 NOLC1Q14978 699 aaKnown RBP eCLIP14.17□□□□□ -0.14
CPNE8-203ENST00000538596 MAP3K11Q16584 847 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 LUZP1Q86V48 1076 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 ZNF594Q96JF6 807 aaPredicted RBP14.17□□□□□ -0.14
CPNE8-203ENST00000538596 MRVI1Q9Y6F6 885 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 LMTK3Q96Q04 1460 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 ARFGEF2Q9Y6D5 1785 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 GOLGA6L4A6NEF3 574 aa14.17□□□□□ -0.14
CPNE8-203ENST00000538596 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
CPNE8-203ENST00000538596 PLBD2Q8NHP8 589 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms