RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 CPLX4Q7Z7G2 160 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 C10orf67Q8IYJ2 551 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 LRRC45Q96CN5 670 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 STRN4Q9NRL3 753 aa7.89□□□□□ -1.15
SORT1-209ENST00000538502 GRIN2BQ13224 1484 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 CLGNO14967 610 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 KIF5AQ12840 1032 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 MAP3K12Q12852 859 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 BICDL2A1A5D9 508 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 TRIM27P14373 513 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 IGHMBP2P38935 993 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 PRIM1P49642 420 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 ZNF445P59923 1031 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 CNGA4Q8IV77 575 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 PPP1R14CQ8TAE6 165 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 IQCGQ9H095 443 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 SLC12A5Q9H2X9 1139 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 AKR1B10O60218 316 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 NLRP5P59047 1200 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 ZNF530Q6P9A1 599 aaPredicted RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 NCOA7Q8NI08 942 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 LRP2BPQ9P2M1 347 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 MTRF1LQ9UGC7 380 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 RTL1A6NKG5 1358 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 ZMYM3Q14202 1370 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 ATF3P18847 181 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 TMTC2Q8N394 836 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 SYTL4Q96C24 671 aaPredicted RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 SCLT1Q96NL6 688 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 VCXQ9H320 206 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 EIF2AK4Q9P2K8 1649 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 RPRD2Q5VT52 1461 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 CIB2O75838 187 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 CCDC38Q502W7 563 aa7.88□□□□□ -1.15
SORT1-209ENST00000538502 SCAF11Q99590 1463 aaKnown RBP7.88□□□□□ -1.15
SORT1-209ENST00000538502 SMARCA5O60264 1052 aaPredicted RBP7.87□□□□□ -1.15
SORT1-209ENST00000538502 INPP5BP32019 993 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 USP37Q86T82 979 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 TRIM47Q96LD4 638 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 TMX1Q9H3N1 280 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 NDC80O14777 642 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 ACTN2P35609 894 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 MXRA7P84157 204 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 TMEM132EQ6IEE7 984 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 FERMT2Q96AC1 680 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 CNPY2Q9Y2B0 182 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 CUL7Q14999 1698 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 NAA25Q14CX7 972 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 AOPEPQ8N6M6 819 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 CUL5Q93034 780 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 TTF2Q9UNY4 1162 aaKnown RBP7.87□□□□□ -1.15
SORT1-209ENST00000538502 PIK3R4Q99570 1358 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 SH2D4BQ5SQS7 431 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 MIPOL1Q8TD10 442 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 METAP2P50579 478 aaKnown RBP eCLIP7.87□□□□□ -1.153e-6■□□□□ 10.8
SORT1-209ENST00000538502 CFAP58Q5T655 872 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 KLHL34Q8N239 644 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 DDX23Q9BUQ8 820 aaKnown RBP7.87□□□□□ -1.15
SORT1-209ENST00000538502 USP16Q9Y5T5 823 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 ASXL1Q8IXJ9 1541 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 BRAPQ7Z569 592 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 PANK2Q9BZ23 570 aa7.87□□□□□ -1.15
SORT1-209ENST00000538502 ORC3Q9UBD5 711 aaPredicted RBP7.87□□□□□ -1.15
SORT1-209ENST00000538502 NPHP3Q7Z494 1330 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 PSMA7O14818 248 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 TAF7Q15545 349 aaPredicted RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 AMOTQ4VCS5 1084 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 UTP14CQ5TAP6 766 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 STMN2Q93045 179 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 ESYT1Q9BSJ8 1104 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 IFIT3O14879 490 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 IGHDP01880 384 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 SLF2Q8IX21 1173 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 ZNF830Q96NB3 372 aaPredicted RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 CCDC160A6NGH7 325 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 CCDC26Q8TAB7 109 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 MYCBPQ99417 103 aaPredicted RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 ANKRD36BQ8N2N9 1353 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 BIN1O00499 593 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 IDH1O75874 414 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 ATP2A2P16615 1042 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 CLNS1AP54105 237 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 PRPF4BQ13523 1007 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 CNNM2Q9H8M5 875 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 GDPD2Q9HCC8 539 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 CABP1Q9NZU7 370 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 SLC5A1P13866 664 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 RRAGBQ5VZM2 374 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 INTS8Q75QN2 995 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 ARHGAP24Q8N264 748 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 KRT23Q9C075 422 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 FEZ2Q9UHY8 353 aaPredicted RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 PCF11O94913 1555 aaKnown RBP7.86□□□□□ -1.15
SORT1-209ENST00000538502 TTC21BQ7Z4L5 1316 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 RAD50Q92878 1312 aa7.86□□□□□ -1.15
SORT1-209ENST00000538502 NBPF7P0C2Y1 421 aaPredicted RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 UBA7P41226 1012 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms