RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CDHR2Q9BYE9 1310 aa13.21□□□□□ -0.29
TNFRSF1A-211ENST00000538363 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
TNFRSF1A-211ENST00000538363 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
TNFRSF1A-211ENST00000538363 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 ANKRD18BA2A2Z9 1011 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 GYS1P13807 737 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 HCLS1P14317 486 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 NFIXQ14938 502 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 MSL1Q68DK7 614 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PNMA6EA0A0J9YXQ4 647 aa13.19□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SERPINB2P05120 415 aa13.19□□□□□ -0.3
TNFRSF1A-211ENST00000538363 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
TNFRSF1A-211ENST00000538363 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
TNFRSF1A-211ENST00000538363 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PNPLA7Q6ZV29 1317 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 NTSR2O95665 410 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 RGS3P49796 1198 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CTSWP56202 376 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SIRT2Q8IXJ6 389 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SYNE4Q8N205 404 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SIL1Q9H173 461 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
TNFRSF1A-211ENST00000538363 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CASP7P55210 303 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 FOXO4P98177 505 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PLA2G12BQ9BX93 195 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 MMP10P09238 476 aa13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 MTX1Q13505 466 aa13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SLC16A10Q8TF71 515 aa13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
TNFRSF1A-211ENST00000538363 KDM2BQ8NHM5 1336 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 ITGA6P23229 1130 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 TM4SF1P30408 202 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CHD1LQ86WJ1 897 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 TTLL11Q8NHH1 800 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 KAZALD1Q96I82 304 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
TNFRSF1A-211ENST00000538363 POLD1P28340 1107 aa13.14□□□□□ -0.31
TNFRSF1A-211ENST00000538363 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
TNFRSF1A-211ENST00000538363 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
TNFRSF1A-211ENST00000538363 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-211ENST00000538363 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
TNFRSF1A-211ENST00000538363 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-211ENST00000538363 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 CSF1RP07333 972 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 NUCB1Q02818 461 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 LDHAL6AQ6ZMR3 332 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 GREM2Q9H772 168 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 CEP126Q9P2H0 1117 aa13.13□□□□□ -0.31
TNFRSF1A-211ENST00000538363 POLRMTO00411 1230 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 PDE6BP35913 854 aa13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 RHPN1Q8TCX5 695 aa13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 IL1RAPL2Q9NP60 686 aa13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 COPRSQ9NQ92 184 aa13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-211ENST00000538363 MYH3P11055 1940 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 EYA2O00167 538 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 ZBTB7AO95365 584 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 DDR1Q08345 913 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
TNFRSF1A-211ENST00000538363 LAMB2P55268 1798 aa13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 TNRC6CQ9HCJ0 1690 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-211ENST00000538363 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms