RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 TTC14Q96N46 770 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 FMNL2Q96PY5 1086 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 LMBRD1Q9NUN5 540 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 C4BP0C0L5 1744 aa11.2□□□□□ -0.62
DDB1-211ENST00000538280 BRD1O95696 1058 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
DDB1-211ENST00000538280 PKP1Q13835 747 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
DDB1-211ENST00000538280 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
DDB1-211ENST00000538280 SLC27A3Q5K4L6 730 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 COPS6Q7L5N1 327 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 GPATCH3Q96I76 525 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 GZF1Q9H116 711 aaPredicted RBP11.19□□□□□ -0.62
DDB1-211ENST00000538280 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
DDB1-211ENST00000538280 SNX14Q9Y5W7 946 aa11.19□□□□□ -0.62
DDB1-211ENST00000538280 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 RFX7Q2KHR2 1363 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
DDB1-211ENST00000538280 CASP7P55210 303 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 OS9Q13438 667 aaPredicted RBP11.18□□□□□ -0.62
DDB1-211ENST00000538280 AMIGO3Q86WK7 504 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 COL23A1Q86Y22 540 aaPredicted RBP11.18□□□□□ -0.62
DDB1-211ENST00000538280 FAM43AQ8N2R8 423 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 EVI5LQ96CN4 794 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 GRPEL1Q9HAV7 217 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 COPRSQ9NQ92 184 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 TFCP2L1Q9NZI6 479 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 USP16Q9Y5T5 823 aa11.18□□□□□ -0.62
DDB1-211ENST00000538280 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
DDB1-211ENST00000538280 POLD1P28340 1107 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 ZNF445P59923 1031 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 AIMP1Q12904 312 aaKnown RBP11.17□□□□□ -0.62
DDB1-211ENST00000538280 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 TTC5Q8N0Z6 440 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 SLC16A10Q8TF71 515 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 EAF2Q96CJ1 260 aaPredicted RBP11.17□□□□□ -0.62
DDB1-211ENST00000538280 MYD88Q99836 296 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 TM6SF1Q9BZW5 370 aa11.17□□□□□ -0.62
DDB1-211ENST00000538280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
DDB1-211ENST00000538280 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 ERVV-2B6SEH9 535 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 HIP1O00291 1037 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 MYL6BP14649 208 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 CABP4P57796 275 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 G3BP1Q13283 466 aaKnown RBP eCLIP11.16□□□□□ -0.621e-9■■□□□ 11.7
DDB1-211ENST00000538280 AACSQ86V21 672 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 GAS2L3Q86XJ1 694 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 PLBD2Q8NHP8 589 aa11.16□□□□□ -0.62
DDB1-211ENST00000538280 CCNL1Q9UK58 526 aaPredicted RBP11.16□□□□□ -0.62
DDB1-211ENST00000538280 MCTP1Q6DN14 999 aa11.15□□□□□ -0.62
DDB1-211ENST00000538280 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
DDB1-211ENST00000538280 UPF3BQ9BZI7 483 aaKnown RBP11.15□□□□□ -0.62
DDB1-211ENST00000538280 DIAPH3Q9NSV4 1193 aa11.15□□□□□ -0.62
DDB1-211ENST00000538280 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.62
DDB1-211ENST00000538280 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.63
DDB1-211ENST00000538280 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
DDB1-211ENST00000538280 PTH1RQ03431 593 aa11.14□□□□□ -0.63
DDB1-211ENST00000538280 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
DDB1-211ENST00000538280 NECTIN1Q15223 517 aa11.14□□□□□ -0.63
DDB1-211ENST00000538280 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
DDB1-211ENST00000538280 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
DDB1-211ENST00000538280 ZCRB1Q8TBF4 217 aaKnown RBP11.14□□□□□ -0.63
DDB1-211ENST00000538280 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
DDB1-211ENST00000538280 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
DDB1-211ENST00000538280 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
DDB1-211ENST00000538280 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
DDB1-211ENST00000538280 NBPF26B4DH59 902 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 H7C1W4 665 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 AK2P54819 239 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
DDB1-211ENST00000538280 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 ZSWIM6Q9HCJ5 1215 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
DDB1-211ENST00000538280 KIF13BQ9NQT8 1826 aa11.13□□□□□ -0.63
DDB1-211ENST00000538280 ATP5JP18859 108 aa11.12□□□□□ -0.63
DDB1-211ENST00000538280 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
DDB1-211ENST00000538280 VPS53Q5VIR6 699 aa11.12□□□□□ -0.63
DDB1-211ENST00000538280 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
DDB1-211ENST00000538280 GPT2Q8TD30 523 aa11.12□□□□□ -0.63
DDB1-211ENST00000538280 ZNF526Q8TF50 670 aaPredicted RBP11.12□□□□□ -0.63
DDB1-211ENST00000538280 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
DDB1-211ENST00000538280 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
DDB1-211ENST00000538280 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
DDB1-211ENST00000538280 MBD3O95983 291 aa11.11□□□□□ -0.63
DDB1-211ENST00000538280 FOXO4P98177 505 aa11.11□□□□□ -0.63
DDB1-211ENST00000538280 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
DDB1-211ENST00000538280 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
DDB1-211ENST00000538280 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
DDB1-211ENST00000538280 ZSCAN31Q96LW9 406 aaPredicted RBP11.11□□□□□ -0.63
DDB1-211ENST00000538280 GPR108Q9NPR9 543 aa11.11□□□□□ -0.63
DDB1-211ENST00000538280 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms