RNA–Protein interactions for RNA: ENST00000538192.4

LRIT2-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

TSL 1 (best) BASIC

Gene LRIT2, Length 3,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-202ENST00000538192 RPAP1Q9BWH6 1393 aaPredicted RBP13.18□□□□□ -0.3
LRIT2-202ENST00000538192 LMBR1LQ6UX01 489 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 TSPY26PQ9H489 355 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
LRIT2-202ENST00000538192 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
LRIT2-202ENST00000538192 A1BGP04217 495 aa13.17□□□□□ -0.3
LRIT2-202ENST00000538192 TERF1P54274 439 aa13.17□□□□□ -0.3
LRIT2-202ENST00000538192 DBNLQ9UJU6 430 aaKnown RBP13.17□□□□□ -0.3
LRIT2-202ENST00000538192 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
LRIT2-202ENST00000538192 TCHHQ07283 1943 aa13.17□□□□□ -0.3
LRIT2-202ENST00000538192 MEGF6O75095 1541 aa13.17□□□□□ -0.3
LRIT2-202ENST00000538192 SLC27A2O14975 620 aa13.17□□□□□ -0.3
LRIT2-202ENST00000538192 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
LRIT2-202ENST00000538192 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
LRIT2-202ENST00000538192 KIF20AO95235 890 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 F13A1P00488 732 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 ZNF594Q96JF6 807 aaPredicted RBP13.16□□□□□ -0.3
LRIT2-202ENST00000538192 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
LRIT2-202ENST00000538192 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 TIMM10P62072 90 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
LRIT2-202ENST00000538192 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
LRIT2-202ENST00000538192 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 DDX11Q96FC9 970 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 DCAF5Q96JK2 942 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 PPP1R9BQ96SB3 815 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 ATP2B3Q16720 1220 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
LRIT2-202ENST00000538192 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
LRIT2-202ENST00000538192 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
LRIT2-202ENST00000538192 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
LRIT2-202ENST00000538192 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 GOLIM4O00461 696 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 LETM1O95202 739 aaPredicted RBP13.14□□□□□ -0.31
LRIT2-202ENST00000538192 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
LRIT2-202ENST00000538192 USP25Q9UHP3 1055 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
LRIT2-202ENST00000538192 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 ST3GAL1Q11201 340 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 CAMK4Q16566 473 aa13.14□□□□□ -0.31
LRIT2-202ENST00000538192 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
LRIT2-202ENST00000538192 CDC37L1Q7L3B6 337 aa13.13□□□□□ -0.31
LRIT2-202ENST00000538192 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
LRIT2-202ENST00000538192 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
LRIT2-202ENST00000538192 MTMR6Q9Y217 621 aa13.13□□□□□ -0.31
LRIT2-202ENST00000538192 ZNF771Q7L3S4 317 aaPredicted RBP13.12□□□□□ -0.31
LRIT2-202ENST00000538192 CHST3Q7LGC8 479 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 HIP1O00291 1037 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 PSMA5P28066 241 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 NBPF14Q5TI25 921 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
LRIT2-202ENST00000538192 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
LRIT2-202ENST00000538192 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
LRIT2-202ENST00000538192 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
LRIT2-202ENST00000538192 JAK2O60674 1132 aa13.11□□□□□ -0.31
LRIT2-202ENST00000538192 PHF14O94880 888 aa13.11□□□□□ -0.31
LRIT2-202ENST00000538192 EVA1CP58658 441 aa13.11□□□□□ -0.31
LRIT2-202ENST00000538192 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
LRIT2-202ENST00000538192 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
LRIT2-202ENST00000538192 CADPS2Q86UW7 1296 aa13.11□□□□□ -0.31
LRIT2-202ENST00000538192 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
LRIT2-202ENST00000538192 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 TAF5LO75529 589 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 ZCRB1Q8TBF4 217 aaKnown RBP13.1□□□□□ -0.31
LRIT2-202ENST00000538192 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
LRIT2-202ENST00000538192 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
LRIT2-202ENST00000538192 UTYO14607 1347 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 UBE2HP62256 183 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 CCDC183Q5T5S1 534 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 NOL7Q9UMY1 257 aaKnown RBP13.1□□□□□ -0.31
LRIT2-202ENST00000538192 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 PUS3Q9BZE2 481 aaKnown RBP13.1□□□□□ -0.31
LRIT2-202ENST00000538192 COPRSQ9NQ92 184 aa13.1□□□□□ -0.31
LRIT2-202ENST00000538192 SLIT3O75094 1523 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
LRIT2-202ENST00000538192 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
LRIT2-202ENST00000538192 CCT2P78371 535 aaKnown RBP13.09□□□□□ -0.31
LRIT2-202ENST00000538192 Q6ZUG5 572 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 CKAP2LQ8IYA6 745 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 BRF1Q92994 677 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
LRIT2-202ENST00000538192 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
LRIT2-202ENST00000538192 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
LRIT2-202ENST00000538192 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms