RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 VAMP4O75379 141 aa27.5■■□□□ 1.99
CCDC78-215ENST00000538176 EIF6P56537 245 aaKnown RBP27.5■■□□□ 1.99
CCDC78-215ENST00000538176 LARGE2Q8N3Y3 721 aa27.5■■□□□ 1.99
CCDC78-215ENST00000538176 RTFDC1Q9BY42 306 aaPredicted RBP27.5■■□□□ 1.99
CCDC78-215ENST00000538176 DPP8Q6V1X1 898 aaPredicted RBP27.49■■□□□ 1.99
CCDC78-215ENST00000538176 GPC2Q8N158 579 aa27.49■■□□□ 1.99
CCDC78-215ENST00000538176 MPNDQ8N594 471 aa27.49■■□□□ 1.99
CCDC78-215ENST00000538176 CACNA1FO60840 1977 aa27.49■■□□□ 1.99
CCDC78-215ENST00000538176 LAMB2P55268 1798 aa27.48■■□□□ 1.99
CCDC78-215ENST00000538176 EXOSC9Q06265 439 aaKnown RBP27.47■■□□□ 1.99
CCDC78-215ENST00000538176 RTL5Q5HYW3 569 aaPredicted RBP27.47■■□□□ 1.99
CCDC78-215ENST00000538176 PDE8AO60658 829 aa27.46■■□□□ 1.99
CCDC78-215ENST00000538176 NIM1KQ8IY84 436 aa27.46■■□□□ 1.99
CCDC78-215ENST00000538176 DDX60Q8IY21 1712 aaKnown RBP27.45■■□□□ 1.99
CCDC78-215ENST00000538176 PPIP5K2O43314 1243 aa27.45■■□□□ 1.98
CCDC78-215ENST00000538176 FLIIQ13045 1269 aa27.45■■□□□ 1.98
CCDC78-215ENST00000538176 CCDC152Q4G0S7 254 aa27.45■■□□□ 1.98
CCDC78-215ENST00000538176 SCN4AP35499 1836 aa27.45■■□□□ 1.98
CCDC78-215ENST00000538176 CDHR2Q9BYE9 1310 aa27.44■■□□□ 1.98
CCDC78-215ENST00000538176 RPS8P62241 208 aaKnown RBP27.44■■□□□ 1.98
CCDC78-215ENST00000538176 ZNF428Q96B54 188 aa27.44■■□□□ 1.98
CCDC78-215ENST00000538176 HACL1Q9UJ83 578 aa27.43■■□□□ 1.98
CCDC78-215ENST00000538176 ZNF541Q9H0D2 1346 aa27.42■■□□□ 1.98
CCDC78-215ENST00000538176 CCER2I3L3R5 266 aa27.42■■□□□ 1.98
CCDC78-215ENST00000538176 IGKV5-2P06315 115 aa27.42■■□□□ 1.98
CCDC78-215ENST00000538176 FKBP5Q13451 457 aaPredicted RBP27.42■■□□□ 1.98
CCDC78-215ENST00000538176 G2E3Q7L622 706 aa27.42■■□□□ 1.98
CCDC78-215ENST00000538176 PNMA8AQ86V59 439 aaPredicted RBP27.42■■□□□ 1.98
CCDC78-215ENST00000538176 CELF1Q92879 486 aaKnown RBP27.41■■□□□ 1.98
CCDC78-215ENST00000538176 TAF1DQ9H5J8 278 aaPredicted RBP27.41■■□□□ 1.98
CCDC78-215ENST00000538176 SPINK5Q9NQ38 1064 aaPredicted RBP27.41■■□□□ 1.98
CCDC78-215ENST00000538176 ZNF521Q96K83 1311 aa27.41■■□□□ 1.98
CCDC78-215ENST00000538176 KIAA2012Q0VF49 1180 aa27.4■■□□□ 1.98
CCDC78-215ENST00000538176 CHADLQ6NUI6 762 aa27.4■■□□□ 1.98
CCDC78-215ENST00000538176 DNAAF4Q8WXU2 420 aa27.4■■□□□ 1.98
CCDC78-215ENST00000538176 ZNRF3Q9ULT6 936 aa27.4■■□□□ 1.98
CCDC78-215ENST00000538176 NEURL1BA8MQ27 555 aa27.39■■□□□ 1.98
CCDC78-215ENST00000538176 AOC3Q16853 763 aa27.39■■□□□ 1.98
CCDC78-215ENST00000538176 LDHDQ86WU2 507 aa27.39■■□□□ 1.98
CCDC78-215ENST00000538176 NSFL1CQ9UNZ2 370 aaKnown RBP27.39■■□□□ 1.98
CCDC78-215ENST00000538176 LMOD1P29536 600 aaPredicted RBP27.38■■□□□ 1.97
CCDC78-215ENST00000538176 LINS1Q8NG48 757 aa27.38■■□□□ 1.97
CCDC78-215ENST00000538176 EPHX2P34913 555 aa27.37■■□□□ 1.97
CCDC78-215ENST00000538176 EYA3Q99504 573 aa27.37■■□□□ 1.97
CCDC78-215ENST00000538176 GJA3Q9Y6H8 435 aa27.37■■□□□ 1.97
CCDC78-215ENST00000538176 CEP350Q5VT06 3117 aa27.36■■□□□ 1.97
CCDC78-215ENST00000538176 H7C1W4 665 aa27.36■■□□□ 1.97
CCDC78-215ENST00000538176 WASHC4Q2M389 1173 aa27.36■■□□□ 1.97
CCDC78-215ENST00000538176 CWF19L2Q2TBE0 894 aaKnown RBP27.36■■□□□ 1.97
CCDC78-215ENST00000538176 E9PSI1 815 aa27.35■■□□□ 1.97
CCDC78-215ENST00000538176 GCKRQ14397 625 aa27.35■■□□□ 1.97
CCDC78-215ENST00000538176 CDC5LQ99459 802 aaKnown RBP27.35■■□□□ 1.97
CCDC78-215ENST00000538176 TAF1P21675 1872 aa27.34■■□□□ 1.97
CCDC78-215ENST00000538176 LRRC37AA6NMS7 1700 aa27.34■■□□□ 1.97
CCDC78-215ENST00000538176 CTSWP56202 376 aa27.34■■□□□ 1.97
CCDC78-215ENST00000538176 TNIP1Q15025 636 aa27.34■■□□□ 1.97
CCDC78-215ENST00000538176 ANKRD18AQ8IVF6 992 aa27.34■■□□□ 1.97
CCDC78-215ENST00000538176 PODXL2Q9NZ53 605 aa27.34■■□□□ 1.97
CCDC78-215ENST00000538176 SLC51AQ86UW1 340 aa27.33■■□□□ 1.97
CCDC78-215ENST00000538176 DNAJC5GQ8N7S2 189 aa27.33■■□□□ 1.97
CCDC78-215ENST00000538176 TTLL11Q8NHH1 800 aa27.33■■□□□ 1.97
CCDC78-215ENST00000538176 PLA2G12BQ9BX93 195 aa27.33■■□□□ 1.97
CCDC78-215ENST00000538176 SEC31BQ9NQW1 1179 aa27.33■■□□□ 1.97
CCDC78-215ENST00000538176 C6orf229H3BNL8 230 aa27.32■■□□□ 1.96
CCDC78-215ENST00000538176 JARID2Q92833 1246 aaPredicted RBP27.32■■□□□ 1.96
CCDC78-215ENST00000538176 COL4A5P29400 1685 aa27.32■■□□□ 1.96
CCDC78-215ENST00000538176 GPSM2P81274 684 aa27.31■■□□□ 1.96
CCDC78-215ENST00000538176 CXCL9Q07325 125 aa27.31■■□□□ 1.96
CCDC78-215ENST00000538176 EAPPQ56P03 285 aaPredicted RBP27.31■■□□□ 1.96
CCDC78-215ENST00000538176 CIAPIN1Q6FI81 312 aa27.31■■□□□ 1.96
CCDC78-215ENST00000538176 UBE3BQ7Z3V4 1068 aa27.31■■□□□ 1.96
CCDC78-215ENST00000538176 CLEC11AQ9Y240 323 aa27.31■■□□□ 1.96
CCDC78-215ENST00000538176 RTL9Q8NET4 1388 aa27.31■■□□□ 1.96
CCDC78-215ENST00000538176 ZC3H12CQ9C0D7 883 aaKnown RBP27.3■■□□□ 1.96
CCDC78-215ENST00000538176 ANKIB1Q9P2G1 1089 aa27.3■■□□□ 1.96
CCDC78-215ENST00000538176 USP50Q70EL3 339 aaPredicted RBP27.29■■□□□ 1.96
CCDC78-215ENST00000538176 TBC1D16Q8TBP0 767 aa27.29■■□□□ 1.96
CCDC78-215ENST00000538176 POLLQ9UGP5 575 aa27.29■■□□□ 1.96
CCDC78-215ENST00000538176 POTEIP0CG38 1075 aa27.28■■□□□ 1.96
CCDC78-215ENST00000538176 POTEJP0CG39 1038 aa27.28■■□□□ 1.96
CCDC78-215ENST00000538176 SCNN1DP51172 638 aa27.28■■□□□ 1.96
CCDC78-215ENST00000538176 BSDC1Q9NW68 430 aaPredicted RBP27.28■■□□□ 1.96
CCDC78-215ENST00000538176 KLRG1Q96E93 195 aa27.27■■□□□ 1.96
CCDC78-215ENST00000538176 CCDC85AQ96PX6 553 aaPredicted RBP27.27■■□□□ 1.96
CCDC78-215ENST00000538176 GGA1Q9UJY5 639 aa27.27■■□□□ 1.96
CCDC78-215ENST00000538176 XDHP47989 1333 aa27.26■■□□□ 1.95
CCDC78-215ENST00000538176 SLFN5Q08AF3 891 aa27.26■■□□□ 1.95
CCDC78-215ENST00000538176 BEND3Q5T5X7 828 aa27.26■■□□□ 1.95
CCDC78-215ENST00000538176 GPRC5DQ9NZD1 345 aa27.26■■□□□ 1.95
CCDC78-215ENST00000538176 MYH3P11055 1940 aa27.26■■□□□ 1.95
CCDC78-215ENST00000538176 CASP7P55210 303 aa27.25■■□□□ 1.95
CCDC78-215ENST00000538176 BCL2L13Q9BXK5 485 aa27.25■■□□□ 1.95
CCDC78-215ENST00000538176 GREM2Q9H772 168 aa27.25■■□□□ 1.95
CCDC78-215ENST00000538176 CREBZFQ9NS37 354 aa27.25■■□□□ 1.95
CCDC78-215ENST00000538176 ADARB2Q9NS39 739 aaKnown RBP27.25■■□□□ 1.95
CCDC78-215ENST00000538176 DUOX1Q9NRD9 1551 aa27.25■■□□□ 1.95
CCDC78-215ENST00000538176 G3V3G9 751 aa27.24■■□□□ 1.95
CCDC78-215ENST00000538176 ALDH1L1O75891 902 aa27.24■■□□□ 1.95
CCDC78-215ENST00000538176 CSF1RP07333 972 aa27.24■■□□□ 1.95
CCDC78-215ENST00000538176 ATP2B4P23634 1241 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms