RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
MSH6-209ENST00000538136 BCAMP50895 628 aa8.82□□□□□ -1
MSH6-209ENST00000538136 EIF6P56537 245 aaKnown RBP8.82□□□□□ -1
MSH6-209ENST00000538136 CWC27Q6UX04 472 aaKnown RBP8.82□□□□□ -1
MSH6-209ENST00000538136 NIM1KQ8IY84 436 aa8.82□□□□□ -1
MSH6-209ENST00000538136 MTFR1LQ9H019 292 aa8.82□□□□□ -1
MSH6-209ENST00000538136 GGA1Q9UJY5 639 aa8.82□□□□□ -1
MSH6-209ENST00000538136 CEP290O15078 2479 aa8.82□□□□□ -1
MSH6-209ENST00000538136 TBC1D10BQ4KMP7 808 aaPredicted RBP8.81□□□□□ -1
MSH6-209ENST00000538136 EPHA10Q5JZY3 1008 aa8.81□□□□□ -1
MSH6-209ENST00000538136 SYT17Q9BSW7 474 aa8.81□□□□□ -1
MSH6-209ENST00000538136 PPLO60437 1756 aa8.81□□□□□ -1
MSH6-209ENST00000538136 CDK12Q9NYV4 1490 aaPredicted RBP8.81□□□□□ -1
MSH6-209ENST00000538136 PDE8AO60658 829 aa8.81□□□□□ -1
MSH6-209ENST00000538136 HAND2P61296 217 aa8.81□□□□□ -1
MSH6-209ENST00000538136 PRPF40BQ6NWY9 871 aaKnown RBP8.81□□□□□ -1
MSH6-209ENST00000538136 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
MSH6-209ENST00000538136 LARP6Q9BRS8 491 aaKnown RBP8.81□□□□□ -1
MSH6-209ENST00000538136 LRRCC1Q9C099 1032 aa8.81□□□□□ -1
MSH6-209ENST00000538136 PXDNQ92626 1479 aa8.81□□□□□ -1
MSH6-209ENST00000538136 EIF5P55010 431 aaKnown RBP8.81□□□□□ -1
MSH6-209ENST00000538136 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
MSH6-209ENST00000538136 PARP10Q53GL7 1025 aa8.81□□□□□ -1
MSH6-209ENST00000538136 PCDHB15Q9Y5E8 787 aa8.81□□□□□ -1
MSH6-209ENST00000538136 RAB11FIP4Q86YS3 637 aa8.8□□□□□ -1
MSH6-209ENST00000538136 CCDC191Q8NCU4 936 aa8.8□□□□□ -1
MSH6-209ENST00000538136 SLC5A1P13866 664 aa8.8□□□□□ -1
MSH6-209ENST00000538136 USP5P45974 858 aa8.8□□□□□ -1
MSH6-209ENST00000538136 CRACR2BQ8N4Y2 399 aaPredicted RBP8.8□□□□□ -1
MSH6-209ENST00000538136 OTUD7AQ8TE49 926 aaPredicted RBP8.8□□□□□ -1
MSH6-209ENST00000538136 CAMKK2Q96RR4 588 aa8.8□□□□□ -1
MSH6-209ENST00000538136 USP44Q9H0E7 712 aa8.8□□□□□ -1
MSH6-209ENST00000538136 TMOD2Q9NZR1 351 aa8.8□□□□□ -1
MSH6-209ENST00000538136 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
MSH6-209ENST00000538136 IBSPP21815 317 aaPredicted RBP8.8□□□□□ -1
MSH6-209ENST00000538136 YY1P25490 414 aa8.8□□□□□ -1
MSH6-209ENST00000538136 TRMT1LQ7Z2T5 733 aaKnown RBP8.8□□□□□ -1
MSH6-209ENST00000538136 CNKSR1Q969H4 720 aa8.8□□□□□ -1
MSH6-209ENST00000538136 IGKV5-2P06315 115 aa8.8□□□□□ -1
MSH6-209ENST00000538136 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
MSH6-209ENST00000538136 DBNDD2Q9BQY9 259 aa8.8□□□□□ -1
MSH6-209ENST00000538136 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
MSH6-209ENST00000538136 PHLPP1O60346 1717 aa8.79□□□□□ -1
MSH6-209ENST00000538136 DISP2A7MBM2 1401 aa8.79□□□□□ -1
MSH6-209ENST00000538136 DLC1Q96QB1 1528 aa8.79□□□□□ -1
MSH6-209ENST00000538136 PPEF1O14829 653 aaPredicted RBP8.79□□□□□ -1
MSH6-209ENST00000538136 SSFA2P28290 1259 aa8.79□□□□□ -1
MSH6-209ENST00000538136 DDR1Q08345 913 aa8.79□□□□□ -1
MSH6-209ENST00000538136 C3orf67Q6ZVT6 689 aa8.79□□□□□ -1
MSH6-209ENST00000538136 TAOK3Q9H2K8 898 aa8.79□□□□□ -1
MSH6-209ENST00000538136 RGPD8O14715 1765 aaPredicted RBP8.79□□□□□ -1
MSH6-209ENST00000538136 ALDH1B1P30837 517 aa8.79□□□□□ -1
MSH6-209ENST00000538136 SAP30BPQ9UHR5 308 aaKnown RBP8.79□□□□□ -1
MSH6-209ENST00000538136 STRCQ7RTU9 1775 aa8.79□□□□□ -1
MSH6-209ENST00000538136 CTSWP56202 376 aa8.79□□□□□ -1
MSH6-209ENST00000538136 CTDP1Q9Y5B0 961 aaPredicted RBP8.79□□□□□ -1
MSH6-209ENST00000538136 TCP10L2B9ZVM9 353 aa8.78□□□□□ -1
MSH6-209ENST00000538136 POLR3DP05423 398 aaPredicted RBP8.78□□□□□ -1
MSH6-209ENST00000538136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.78□□□□□ -1
MSH6-209ENST00000538136 PLSCR1O15162 318 aa8.78□□□□□ -1
MSH6-209ENST00000538136 TDO2P48775 406 aa8.78□□□□□ -1
MSH6-209ENST00000538136 CHRNDQ07001 517 aa8.78□□□□□ -1
MSH6-209ENST00000538136 CCDC125Q86Z20 511 aa8.78□□□□□ -1
MSH6-209ENST00000538136 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
MSH6-209ENST00000538136 A0A1B0GUL7 405 aa8.78□□□□□ -1
MSH6-209ENST00000538136 CAMTA2O94983 1202 aa8.78□□□□□ -1
MSH6-209ENST00000538136 ADORA1P30542 326 aa8.78□□□□□ -1
MSH6-209ENST00000538136 SLFNL1Q499Z3 407 aa8.78□□□□□ -1
MSH6-209ENST00000538136 MFSD14BQ5SR56 506 aa8.78□□□□□ -1
MSH6-209ENST00000538136 LTBP4Q8N2S1 1624 aa8.78□□□□□ -1
MSH6-209ENST00000538136 ABT1Q9ULW3 272 aaKnown RBP8.78□□□□□ -1
MSH6-209ENST00000538136 MYO9BQ13459 2157 aa8.77□□□□□ -1
MSH6-209ENST00000538136 RGS12O14924 1447 aa8.77□□□□□ -1
MSH6-209ENST00000538136 RNF123Q5XPI4 1314 aa8.77□□□□□ -1
MSH6-209ENST00000538136 PNPLA7Q6ZV29 1317 aa8.77□□□□□ -1
MSH6-209ENST00000538136 C9orf131Q5VYM1 1079 aa8.77□□□□□ -1
MSH6-209ENST00000538136 NPC1L1Q9UHC9 1359 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 DDNO94850 711 aaPredicted RBP8.77□□□□□ -1.01
MSH6-209ENST00000538136 SASH1O94885 1247 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 IGHDP01880 384 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 HIBADHP31937 336 aaKnown RBP8.77□□□□□ -1.01
MSH6-209ENST00000538136 NBR1Q14596 966 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 ALDH1L2Q3SY69 923 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 HSP90AB4PQ58FF6 505 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1.01
MSH6-209ENST00000538136 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
MSH6-209ENST00000538136 CYP7A1P22680 504 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 DIXDC1Q155Q3 683 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 BEND3Q5T5X7 828 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 USP42Q9H9J4 1324 aaKnown RBP8.76□□□□□ -1.01
MSH6-209ENST00000538136 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 RHPN1Q8TCX5 695 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 TCEANC2Q96MN5 208 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 H7C1D1 291 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 PRDM1O75626 825 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 HMGB2P26583 209 aaKnown RBP8.76□□□□□ -1.01
MSH6-209ENST00000538136 SLC9C2Q5TAH2 1124 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 MIGA2Q7L4E1 593 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 PTPRCP08575 1304 aa8.76□□□□□ -1.01
MSH6-209ENST00000538136 MASTLQ96GX5 879 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms