RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CFAP65Q6ZU64 1925 aaKnown RBP12.48□□□□□ -0.41
RTN3-208ENST00000537981 KIF3BO15066 747 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 CDC25BP30305 580 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 MAP2K2P36507 400 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 PGBD1Q96JS3 809 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
RTN3-208ENST00000537981 PHACTR2O75167 634 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 PPP2R5AQ15172 486 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 LRRC31Q6UY01 552 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 MYOM2P54296 1465 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 ELP1O95163 1332 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 GNL2Q13823 731 aaKnown RBP12.47□□□□□ -0.41
RTN3-208ENST00000537981 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 HOMER1Q86YM7 354 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 SUGP1Q8IWZ8 645 aaKnown RBP12.47□□□□□ -0.41
RTN3-208ENST00000537981 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 PARD6BQ9BYG5 372 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 CLSTN2Q9H4D0 955 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
RTN3-208ENST00000537981 COL3A1P02461 1466 aaPredicted RBP12.47□□□□□ -0.41
RTN3-208ENST00000537981 CEBPAP49715 358 aaPredicted RBP12.46□□□□□ -0.41
RTN3-208ENST00000537981 ANAPC15P60006 121 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 MCM6Q14566 821 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
RTN3-208ENST00000537981 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
RTN3-208ENST00000537981 FBXW10Q5XX13 1052 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 TRIM65Q6PJ69 517 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 RBM43Q6ZSC3 357 aaKnown RBP12.46□□□□□ -0.41
RTN3-208ENST00000537981 DHX40Q8IX18 779 aaKnown RBP12.46□□□□□ -0.41
RTN3-208ENST00000537981 MICALL1Q8N3F8 863 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 MNS1Q8NEH6 495 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 ANKRD20A12PQ8NF67 263 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 MRFAP1L1Q96HT8 127 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
RTN3-208ENST00000537981 HSPA4P34932 840 aa12.46□□□□□ -0.42
RTN3-208ENST00000537981 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.42
RTN3-208ENST00000537981 PPM1EQ8WY54 764 aa12.46□□□□□ -0.42
RTN3-208ENST00000537981 CLIC6Q96NY7 704 aa12.46□□□□□ -0.42
RTN3-208ENST00000537981 PSD3Q9NYI0 1048 aa12.45□□□□□ -0.42
RTN3-208ENST00000537981 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
RTN3-208ENST00000537981 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
RTN3-208ENST00000537981 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
RTN3-208ENST00000537981 HMOX1P09601 288 aa12.45□□□□□ -0.42
RTN3-208ENST00000537981 LONRF2Q1L5Z9 754 aa12.45□□□□□ -0.42
RTN3-208ENST00000537981 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
RTN3-208ENST00000537981 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
RTN3-208ENST00000537981 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
RTN3-208ENST00000537981 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 YTHDC2Q9H6S0 1430 aaKnown RBP12.44□□□□□ -0.42
RTN3-208ENST00000537981 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 LIG3P49916 1009 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 MED4Q9NPJ6 270 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 IGSF5Q9NSI5 407 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 LIMCH1Q9UPQ0 1083 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 MAST1Q9Y2H9 1570 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 GOLIM4O00461 696 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 TFRCP02786 760 aaKnown RBP12.44□□□□□ -0.42
RTN3-208ENST00000537981 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
RTN3-208ENST00000537981 CPLX2Q6PUV4 134 aaKnown RBP12.44□□□□□ -0.42
RTN3-208ENST00000537981 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
RTN3-208ENST00000537981 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 ETF1P62495 437 aaKnown RBP12.43□□□□□ -0.42
RTN3-208ENST00000537981 CEBPZQ03701 1054 aaKnown RBP12.43□□□□□ -0.42
RTN3-208ENST00000537981 DHX8Q14562 1220 aaKnown RBP12.43□□□□□ -0.42
RTN3-208ENST00000537981 AOPEPQ8N6M6 819 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 NEMFO60524 1076 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 MNAT1P51948 309 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 KRT85P78386 507 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 ME3Q16798 604 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 TMC6Q7Z403 805 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 TADA2BQ86TJ2 420 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
RTN3-208ENST00000537981 SPATA32Q96LK8 384 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 WDR24Q96S15 920 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
RTN3-208ENST00000537981 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 RABEP2Q9H5N1 569 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 HYPKQ9NX55 129 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 ADCY9O60503 1353 aa12.43□□□□□ -0.42
RTN3-208ENST00000537981 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms