RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 LAMA4Q16363 1823 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 SLC27A2O14975 620 aa11.2□□□□□ -0.62
UBE3B-207ENST00000537063 CASTP20810 708 aaKnown RBP11.2□□□□□ -0.62
UBE3B-207ENST00000537063 ZNF831Q5JPB2 1677 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 HMG20BQ9P0W2 317 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 CDHR2Q9BYE9 1310 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 EYA2O00167 538 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 TAF5LO75529 589 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-207ENST00000537063 ZNF445P59923 1031 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 ZNF589Q86UQ0 364 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-207ENST00000537063 GAS2L3Q86XJ1 694 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBE3B-207ENST00000537063 LAMB2P55268 1798 aa11.19□□□□□ -0.62
UBE3B-207ENST00000537063 ZSCAN31Q96LW9 406 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 JAKMIP1Q96N16 626 aaKnown RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 DDX49Q9Y6V7 483 aaKnown RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 MAP3K15Q6ZN16 1313 aa11.18□□□□□ -0.62
UBE3B-207ENST00000537063 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
UBE3B-207ENST00000537063 WDR33Q9C0J8 1336 aaKnown RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 CSF1RP07333 972 aa11.18□□□□□ -0.62
UBE3B-207ENST00000537063 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
UBE3B-207ENST00000537063 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
UBE3B-207ENST00000537063 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
UBE3B-207ENST00000537063 MYH7P12883 1935 aa11.18□□□□□ -0.62
UBE3B-207ENST00000537063 LARGE1O95461 756 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 STARD3NLO95772 234 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 ST3GAL1Q11201 340 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 GPT2Q8TD30 523 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
UBE3B-207ENST00000537063 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
UBE3B-207ENST00000537063 RIC1Q4ADV7 1423 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-207ENST00000537063 KBTBD3Q8NAB2 608 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-207ENST00000537063 COL5A3P25940 1745 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-207ENST00000537063 CPA1P15085 419 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 PSMA5P28066 241 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 RNF20Q5VTR2 975 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
UBE3B-207ENST00000537063 KIF6Q6ZMV9 814 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 SLIT2O94813 1529 aa11.17□□□□□ -0.62
UBE3B-207ENST00000537063 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-207ENST00000537063 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
UBE3B-207ENST00000537063 LRRC24Q50LG9 513 aa11.16□□□□□ -0.62
UBE3B-207ENST00000537063 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-207ENST00000537063 BCORQ6W2J9 1755 aa11.16□□□□□ -0.62
UBE3B-207ENST00000537063 PANK2Q9BZ23 570 aa11.16□□□□□ -0.62
UBE3B-207ENST00000537063 TCHHQ07283 1943 aa11.15□□□□□ -0.62
UBE3B-207ENST00000537063 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
UBE3B-207ENST00000537063 PRPF40AO75400 957 aaKnown RBP11.15□□□□□ -0.62
UBE3B-207ENST00000537063 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
UBE3B-207ENST00000537063 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
UBE3B-207ENST00000537063 MBD3O95983 291 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 MCMDC2Q4G0Z9 681 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 HELLSQ9NRZ9 838 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 THRAP3Q9Y2W1 955 aaKnown RBP11.15□□□□□ -0.63
UBE3B-207ENST00000537063 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 TAF6LQ9Y6J9 622 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.63
UBE3B-207ENST00000537063 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 ME3Q16798 604 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 A0A1B0GUL7 405 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 ERVV-1B6SEH8 477 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 KRT32Q14532 448 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 ANKRD1Q15327 319 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 NLRP10Q86W26 655 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 PUS3Q9BZE2 481 aaKnown RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 TPCN1Q9ULQ1 816 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 SYT1P21579 422 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 TOB2Q14106 344 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 DNAJC2Q99543 621 aaKnown RBP11.14□□□□□ -0.63
UBE3B-207ENST00000537063 NDUFB9Q9Y6M9 179 aa11.14□□□□□ -0.63
UBE3B-207ENST00000537063 EXOC5O00471 708 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 STX6O43752 255 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 PDIA4P13667 645 aaKnown RBP11.13□□□□□ -0.63
UBE3B-207ENST00000537063 IL6STP40189 918 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-207ENST00000537063 KCNJ4P48050 445 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 HLFQ16534 295 aa11.13□□□□□ -0.63
UBE3B-207ENST00000537063 CAVIN1Q6NZI2 390 aaKnown RBP11.13□□□□□ -0.63
UBE3B-207ENST00000537063 DDX46Q7L014 1031 aaKnown RBP11.13□□□□□ -0.63
UBE3B-207ENST00000537063 DSCC1Q9BVC3 393 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms