RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 RASSF7Q02833 373 aa26.56■■□□□ 1.84
LPCAT3-204ENST00000536797 C9orf78Q9NZ63 289 aaPredicted RBP26.56■■□□□ 1.84
LPCAT3-204ENST00000536797 NFKBIEO00221 500 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 BBOX1O75936 387 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 CASP7P55210 303 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 CTSWP56202 376 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 CC2D2BQ6DHV5 1058 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 ARHGAP45Q92619 1136 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 TMX4Q9H1E5 349 aaPredicted RBP26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 SBF1O95248 1867 aa26.55■■□□□ 1.84
LPCAT3-204ENST00000536797 IPO8O15397 1037 aaKnown RBP26.54■■□□□ 1.84
LPCAT3-204ENST00000536797 OLFM4Q6UX06 510 aa26.54■■□□□ 1.84
LPCAT3-204ENST00000536797 PLA2G12BQ9BX93 195 aa26.54■■□□□ 1.84
LPCAT3-204ENST00000536797 TAOK3Q9H2K8 898 aa26.54■■□□□ 1.84
LPCAT3-204ENST00000536797 RTKN2Q8IZC4 609 aa26.53■■□□□ 1.84
LPCAT3-204ENST00000536797 FRAT1Q92837 279 aaPredicted RBP26.52■■□□□ 1.84
LPCAT3-204ENST00000536797 YTHDC1Q96MU7 727 aaKnown RBP26.52■■□□□ 1.84
LPCAT3-204ENST00000536797 CCDC85AQ96PX6 553 aaPredicted RBP26.52■■□□□ 1.84
LPCAT3-204ENST00000536797 LTBP3Q9NS15 1303 aa26.52■■□□□ 1.84
LPCAT3-204ENST00000536797 GRIPAP1Q4V328 841 aa26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 C9orf131Q5VYM1 1079 aa26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 TMC4Q7Z404 712 aa26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 TTLL11Q8NHH1 800 aa26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 CELF1Q92879 486 aaKnown RBP26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 ATP6V0A2Q9Y487 856 aa26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 CCDC88AQ3V6T2 1871 aa26.51■■□□□ 1.83
LPCAT3-204ENST00000536797 LMNB1P20700 586 aa26.5■■□□□ 1.83
LPCAT3-204ENST00000536797 CCT4P50991 539 aaKnown RBP26.5■■□□□ 1.83
LPCAT3-204ENST00000536797 RNF181Q9P0P0 153 aa26.5■■□□□ 1.83
LPCAT3-204ENST00000536797 FKBP4Q02790 459 aaKnown RBP eCLIP26.49■■□□□ 1.83
LPCAT3-204ENST00000536797 SP8Q8IXZ3 490 aa26.49■■□□□ 1.83
LPCAT3-204ENST00000536797 SEC31BQ9NQW1 1179 aa26.49■■□□□ 1.83
LPCAT3-204ENST00000536797 SNED1Q8TER0 1413 aa26.48■■□□□ 1.83
LPCAT3-204ENST00000536797 RPS8P62241 208 aaKnown RBP26.48■■□□□ 1.83
LPCAT3-204ENST00000536797 ATF7IPQ6VMQ6 1270 aa26.48■■□□□ 1.83
LPCAT3-204ENST00000536797 GREM2Q9H772 168 aa26.48■■□□□ 1.83
LPCAT3-204ENST00000536797 UTYO14607 1347 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 RTL9Q8NET4 1388 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 COL4A1P02462 1669 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 NBPF7P0C2Y1 421 aaPredicted RBP26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 TRIM27P14373 513 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 PRELPP51888 382 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 ZKSCAN2Q63HK3 967 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 CDC5LQ99459 802 aaKnown RBP26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 PSMD1Q99460 953 aa26.47■■□□□ 1.83
LPCAT3-204ENST00000536797 LRRC37AA6NMS7 1700 aa26.46■■□□□ 1.83
LPCAT3-204ENST00000536797 CSF1RP07333 972 aa26.46■■□□□ 1.83
LPCAT3-204ENST00000536797 SLC51AQ86UW1 340 aa26.46■■□□□ 1.83
LPCAT3-204ENST00000536797 DICER1Q9UPY3 1922 aaKnown RBP26.45■■□□□ 1.82
LPCAT3-204ENST00000536797 FOXO4P98177 505 aa26.45■■□□□ 1.82
LPCAT3-204ENST00000536797 ANKRD18AQ8IVF6 992 aa26.45■■□□□ 1.82
LPCAT3-204ENST00000536797 USP44Q9H0E7 712 aa26.44■■□□□ 1.82
LPCAT3-204ENST00000536797 TIAM2Q8IVF5 1701 aa26.43■■□□□ 1.82
LPCAT3-204ENST00000536797 FAM161AQ3B820 660 aa26.43■■□□□ 1.82
LPCAT3-204ENST00000536797 SUCLG2Q96I99 432 aa26.43■■□□□ 1.82
LPCAT3-204ENST00000536797 CHMP3Q9Y3E7 222 aa26.43■■□□□ 1.82
LPCAT3-204ENST00000536797 SPEF2Q9C093 1822 aa26.42■■□□□ 1.82
LPCAT3-204ENST00000536797 ITGA6P23229 1130 aa26.42■■□□□ 1.82
LPCAT3-204ENST00000536797 INTS3Q68E01 1043 aaKnown RBP26.42■■□□□ 1.82
LPCAT3-204ENST00000536797 MPNDQ8N594 471 aa26.42■■□□□ 1.82
LPCAT3-204ENST00000536797 ZNF277Q9NRM2 450 aaPredicted RBP26.42■■□□□ 1.82
LPCAT3-204ENST00000536797 ZC3H4Q9UPT8 1303 aaKnown RBP26.41■■□□□ 1.82
LPCAT3-204ENST00000536797 EPHA10Q5JZY3 1008 aa26.41■■□□□ 1.82
LPCAT3-204ENST00000536797 LMBR1LQ6UX01 489 aa26.41■■□□□ 1.82
LPCAT3-204ENST00000536797 DPP8Q6V1X1 898 aaPredicted RBP26.41■■□□□ 1.82
LPCAT3-204ENST00000536797 CLUAP1Q96AJ1 413 aa26.41■■□□□ 1.82
LPCAT3-204ENST00000536797 RCAN3Q9UKA8 241 aa26.4■■□□□ 1.82
LPCAT3-204ENST00000536797 TNNQ9UQP3 1299 aa26.4■■□□□ 1.82
LPCAT3-204ENST00000536797 ANKRD18BA2A2Z9 1011 aa26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 IGHMBP2P38935 993 aaKnown RBP26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 IARSP41252 1262 aaKnown RBP26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 IFIT5Q13325 482 aaKnown RBP26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 ZNF784Q8NCA9 323 aaPredicted RBP26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 SUPT20HQ8NEM7 779 aa26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 KAZALD1Q96I82 304 aa26.39■■□□□ 1.82
LPCAT3-204ENST00000536797 FTSJ3Q8IY81 847 aaKnown RBP26.39■■□□□ 1.81
LPCAT3-204ENST00000536797 NSFL1CQ9UNZ2 370 aaKnown RBP26.39■■□□□ 1.81
LPCAT3-204ENST00000536797 UBTFL1P0CB47 393 aaPredicted RBP26.38■■□□□ 1.81
LPCAT3-204ENST00000536797 CCDC57Q2TAC2 916 aa26.38■■□□□ 1.81
LPCAT3-204ENST00000536797 RTFDC1Q9BY42 306 aaPredicted RBP26.38■■□□□ 1.81
LPCAT3-204ENST00000536797 BICC1Q9H694 974 aaKnown RBP26.38■■□□□ 1.81
LPCAT3-204ENST00000536797 BSDC1Q9NW68 430 aaPredicted RBP26.38■■□□□ 1.81
LPCAT3-204ENST00000536797 HDAC5Q9UQL6 1122 aa26.37■■□□□ 1.81
LPCAT3-204ENST00000536797 GPSM2P81274 684 aa26.36■■□□□ 1.81
LPCAT3-204ENST00000536797 MPHOSPH8Q99549 860 aa26.36■■□□□ 1.81
LPCAT3-204ENST00000536797 DUOX1Q9NRD9 1551 aa26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 RABL6Q3YEC7 729 aaPredicted RBP26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 DZIP1LQ8IYY4 767 aaKnown RBP26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 TMEM57Q8N5G2 664 aa26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 VPS33BQ9H267 617 aa26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 ANKIB1Q9P2G1 1089 aa26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 LTBP1Q14766 1721 aa26.35■■□□□ 1.81
LPCAT3-204ENST00000536797 PPIP5K2O43314 1243 aa26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 TAF7LQ5H9L4 462 aa26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 LARGE2Q8N3Y3 721 aa26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 ZNF526Q8TF50 670 aaPredicted RBP26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 JDP2Q8WYK2 163 aa26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 MEIS3Q99687 375 aa26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 PODXL2Q9NZ53 605 aa26.34■■□□□ 1.81
LPCAT3-204ENST00000536797 GNAI3P08754 354 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms