RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 CTSOP43234 321 aaPredicted RBP10.5□□□□□ -0.73
CCDC60-203ENST00000536742 SEC13P55735 322 aa10.5□□□□□ -0.73
CCDC60-203ENST00000536742 PTSQ03393 145 aa10.5□□□□□ -0.73
CCDC60-203ENST00000536742 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
CCDC60-203ENST00000536742 FAM181BA6NEQ2 426 aa10.49□□□□□ -0.73
CCDC60-203ENST00000536742 HSPA6P17066 643 aa10.49□□□□□ -0.73
CCDC60-203ENST00000536742 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
CCDC60-203ENST00000536742 TPCN2Q8NHX9 752 aa10.49□□□□□ -0.73
CCDC60-203ENST00000536742 DCCP43146 1447 aa10.49□□□□□ -0.73
CCDC60-203ENST00000536742 VSIG8P0DPA2 414 aa10.48□□□□□ -0.73
CCDC60-203ENST00000536742 CLN3Q13286 438 aa10.48□□□□□ -0.73
CCDC60-203ENST00000536742 SWI5Q1ZZU3 235 aa10.48□□□□□ -0.73
CCDC60-203ENST00000536742 ZNF594Q96JF6 807 aaPredicted RBP10.48□□□□□ -0.73
CCDC60-203ENST00000536742 DISP2A7MBM2 1401 aa10.48□□□□□ -0.73
CCDC60-203ENST00000536742 DKK1O94907 266 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 INHAP05111 366 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 GDF10P55107 478 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 DPYDQ12882 1025 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 KIAA1024Q9UPX6 916 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 GLI3P10071 1580 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 RGPD1P0DJD0 1748 aa10.47□□□□□ -0.73
CCDC60-203ENST00000536742 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
CCDC60-203ENST00000536742 GPC1P35052 558 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 SCNN1DP51172 638 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 TNS4Q8IZW8 715 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 ZSCAN1Q8NBB4 408 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 XAGE2Q96GT9 111 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 ESYT1Q9BSJ8 1104 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.73
CCDC60-203ENST00000536742 ZMIZ1Q9ULJ6 1067 aa10.46□□□□□ -0.73
CCDC60-203ENST00000536742 CFAP65Q6ZU64 1925 aaKnown RBP10.46□□□□□ -0.74
CCDC60-203ENST00000536742 EFCAB6Q5THR3 1501 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 TMEM229AB2RXF0 380 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 NBPF8Q3BBV2 869 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 COL13A1Q5TAT6 717 aaPredicted RBP10.45□□□□□ -0.74
CCDC60-203ENST00000536742 UNC5CLQ8IV45 518 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 CCDC155Q8N6L0 562 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 KDF1Q8NAX2 398 aaPredicted RBP10.45□□□□□ -0.74
CCDC60-203ENST00000536742 ETNK1Q9HBU6 452 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 ARHGEF10LQ9HCE6 1279 aa10.45□□□□□ -0.74
CCDC60-203ENST00000536742 PIK3C2BO00750 1634 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 A0A1W2PRU2 124 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 FAM83GA6ND36 823 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 EZH2Q15910 746 aaKnown RBP10.44□□□□□ -0.74
CCDC60-203ENST00000536742 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 RNF217Q8TC41 542 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 NLRP3Q96P20 1036 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 ZNF358Q9NW07 568 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 UTRNP46939 3433 aa10.44□□□□□ -0.74
CCDC60-203ENST00000536742 PARD3Q8TEW0 1356 aa10.43□□□□□ -0.74
CCDC60-203ENST00000536742 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
CCDC60-203ENST00000536742 MST1RQ04912 1400 aa10.42□□□□□ -0.74
CCDC60-203ENST00000536742 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
CCDC60-203ENST00000536742 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
CCDC60-203ENST00000536742 B4GALNT3Q6L9W6 998 aa10.42□□□□□ -0.74
CCDC60-203ENST00000536742 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
CCDC60-203ENST00000536742 TBX22Q9Y458 520 aa10.42□□□□□ -0.74
CCDC60-203ENST00000536742 HRH3Q9Y5N1 445 aa10.42□□□□□ -0.74
CCDC60-203ENST00000536742 COL22A1Q8NFW1 1626 aaPredicted RBP10.41□□□□□ -0.74
CCDC60-203ENST00000536742 MEN1O00255 615 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 MTFR1Q15390 333 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 LYSMD3Q7Z3D4 306 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC60-203ENST00000536742 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 STK32AQ8WU08 396 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 CLP1Q92989 425 aaKnown RBP10.41□□□□□ -0.74
CCDC60-203ENST00000536742 CAMKK2Q96RR4 588 aa10.41□□□□□ -0.74
CCDC60-203ENST00000536742 SLC35F4A4IF30 521 aa10.4□□□□□ -0.74
CCDC60-203ENST00000536742 TMEM88BA6NKF7 163 aa10.4□□□□□ -0.74
CCDC60-203ENST00000536742 IL2RAP01589 272 aa10.4□□□□□ -0.74
CCDC60-203ENST00000536742 RNF144AP50876 292 aaPredicted RBP10.4□□□□□ -0.74
CCDC60-203ENST00000536742 SMTNP53814 917 aa10.4□□□□□ -0.74
CCDC60-203ENST00000536742 TRAIPQ9BWF2 469 aa10.4□□□□□ -0.74
CCDC60-203ENST00000536742 RPRD2Q5VT52 1461 aaKnown RBP10.39□□□□□ -0.75
CCDC60-203ENST00000536742 SFI1A8K8P3 1242 aa10.39□□□□□ -0.75
CCDC60-203ENST00000536742 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
CCDC60-203ENST00000536742 FOXD4L5Q5VV16 416 aaPredicted RBP10.39□□□□□ -0.75
CCDC60-203ENST00000536742 ARHGAP31Q2M1Z3 1444 aa10.39□□□□□ -0.75
CCDC60-203ENST00000536742 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
CCDC60-203ENST00000536742 PLEKHG1Q9ULL1 1385 aa10.39□□□□□ -0.75
CCDC60-203ENST00000536742 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 MYOM2P54296 1465 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 CCDC18Q5T9S5 1454 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 A6NJY4 79 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 ITGA6P23229 1130 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 TLR1Q15399 786 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 PRICKLE2Q7Z3G6 844 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
CCDC60-203ENST00000536742 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 ADGRB2O60241 1585 aa10.38□□□□□ -0.75
CCDC60-203ENST00000536742 MBD5Q9P267 1494 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 LAMC1P11047 1609 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 CDC14CA4D256 554 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 CDK2AP1O14519 115 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 PDIA4P13667 645 aaKnown RBP10.37□□□□□ -0.75
CCDC60-203ENST00000536742 EPHA4P54764 986 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 CENPCQ03188 943 aa10.37□□□□□ -0.75
CCDC60-203ENST00000536742 VPS72Q15906 364 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms