RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
RPAIN-205ENST00000536255 BBOX1O75936 387 aa17.17■□□□□ 0.34
RPAIN-205ENST00000536255 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
RPAIN-205ENST00000536255 GRAPQ13588 217 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 SLC51AQ86UW1 340 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-205ENST00000536255 PSMD1Q99460 953 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 TMX4Q9H1E5 349 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-205ENST00000536255 ATP6V0A2Q9Y487 856 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
RPAIN-205ENST00000536255 F6X3S4 739 aa17.15■□□□□ 0.34
RPAIN-205ENST00000536255 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
RPAIN-205ENST00000536255 PDE8AO60658 829 aa17.15■□□□□ 0.34
RPAIN-205ENST00000536255 JARID2Q92833 1246 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-205ENST00000536255 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-205ENST00000536255 GCKRQ14397 625 aa17.14■□□□□ 0.33
RPAIN-205ENST00000536255 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
RPAIN-205ENST00000536255 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
RPAIN-205ENST00000536255 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
RPAIN-205ENST00000536255 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
RPAIN-205ENST00000536255 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
RPAIN-205ENST00000536255 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
RPAIN-205ENST00000536255 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
RPAIN-205ENST00000536255 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
RPAIN-205ENST00000536255 DICER1Q9UPY3 1922 aaKnown RBP17.13■□□□□ 0.33
RPAIN-205ENST00000536255 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 H7C1W4 665 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 KIF3CO14782 793 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
RPAIN-205ENST00000536255 CCDC152Q4G0S7 254 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 UBE3BQ7Z3V4 1068 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
RPAIN-205ENST00000536255 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
RPAIN-205ENST00000536255 BCAR3O75815 825 aa17.11■□□□□ 0.33
RPAIN-205ENST00000536255 CTSWP56202 376 aa17.11■□□□□ 0.33
RPAIN-205ENST00000536255 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
RPAIN-205ENST00000536255 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
RPAIN-205ENST00000536255 COL4A1P02462 1669 aa17.1■□□□□ 0.33
RPAIN-205ENST00000536255 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
RPAIN-205ENST00000536255 DPP8Q6V1X1 898 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-205ENST00000536255 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-205ENST00000536255 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
RPAIN-205ENST00000536255 TAF1P21675 1872 aa17.1■□□□□ 0.33
RPAIN-205ENST00000536255 CASP7P55210 303 aa17.09■□□□□ 0.33
RPAIN-205ENST00000536255 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
RPAIN-205ENST00000536255 MPNDQ8N594 471 aa17.09■□□□□ 0.33
RPAIN-205ENST00000536255 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
RPAIN-205ENST00000536255 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-205ENST00000536255 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-205ENST00000536255 CCT4P50991 539 aaKnown RBP17.08■□□□□ 0.32
RPAIN-205ENST00000536255 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
RPAIN-205ENST00000536255 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
RPAIN-205ENST00000536255 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
RPAIN-205ENST00000536255 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
RPAIN-205ENST00000536255 RRAGCQ9HB90 399 aa17.08■□□□□ 0.32
RPAIN-205ENST00000536255 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-205ENST00000536255 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
RPAIN-205ENST00000536255 COL4A5P29400 1685 aa17.07■□□□□ 0.32
RPAIN-205ENST00000536255 RTL9Q8NET4 1388 aa17.07■□□□□ 0.32
RPAIN-205ENST00000536255 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
RPAIN-205ENST00000536255 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
RPAIN-205ENST00000536255 VPS33BQ9H267 617 aa17.07■□□□□ 0.32
RPAIN-205ENST00000536255 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 FZD9O00144 591 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 GRM8O00222 908 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 PPIP5K2O43314 1243 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-205ENST00000536255 TRIM27P14373 513 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 AOC3Q16853 763 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
RPAIN-205ENST00000536255 GREM2Q9H772 168 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 WDR90Q96KV7 1748 aa17.06■□□□□ 0.32
RPAIN-205ENST00000536255 TOMM70O94826 608 aa17.05■□□□□ 0.32
RPAIN-205ENST00000536255 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-205ENST00000536255 GPSM2P81274 684 aa17.05■□□□□ 0.32
RPAIN-205ENST00000536255 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
RPAIN-205ENST00000536255 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
RPAIN-205ENST00000536255 C16orf71Q8IYS4 520 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-205ENST00000536255 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
RPAIN-205ENST00000536255 MYH3P11055 1940 aa17.05■□□□□ 0.32
RPAIN-205ENST00000536255 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
RPAIN-205ENST00000536255 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
RPAIN-205ENST00000536255 POTECB2RU33 542 aa17.03■□□□□ 0.32
RPAIN-205ENST00000536255 CSF1RP07333 972 aa17.03■□□□□ 0.32
RPAIN-205ENST00000536255 MS4A1P11836 297 aa17.03■□□□□ 0.32
RPAIN-205ENST00000536255 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
RPAIN-205ENST00000536255 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
RPAIN-205ENST00000536255 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-205ENST00000536255 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
RPAIN-205ENST00000536255 ITGA6P23229 1130 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 FOXO4P98177 505 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
RPAIN-205ENST00000536255 GPC2Q8N158 579 aa17.02■□□□□ 0.32
RPAIN-205ENST00000536255 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-205ENST00000536255 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms