RNA–Protein interactions for RNA: ENST00000536189.6

TIMP2-202, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 2 BASIC

Gene TIMP2, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-202ENST00000536189 SEPT12Q8IYM1 358 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
TIMP2-202ENST00000536189 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 IQSEC3Q9UPP2 1182 aaPredicted RBP11.56□□□□□ -0.56
TIMP2-202ENST00000536189 TOGARAM1Q9Y4F4 1720 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 CCDC87Q9NVE4 849 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 SHANK3Q9BYB0 1731 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 SLIT2O94813 1529 aa11.56□□□□□ -0.56
TIMP2-202ENST00000536189 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 TTC41PQ6P2S7 1318 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 GNPATO15228 680 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 NFKBIBQ15653 356 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 TNNI3KQ59H18 835 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
TIMP2-202ENST00000536189 FPGT-TNNI3KV9GXZ4 949 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 GLI3P10071 1580 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 FRAT2O75474 233 aaPredicted RBP11.55□□□□□ -0.56
TIMP2-202ENST00000536189 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
TIMP2-202ENST00000536189 CHMP4CQ96CF2 233 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 COL22A1Q8NFW1 1626 aaPredicted RBP11.55□□□□□ -0.56
TIMP2-202ENST00000536189 BCL9LQ86UU0 1499 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 AOX1Q06278 1338 aa11.55□□□□□ -0.56
TIMP2-202ENST00000536189 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 FSD1Q9BTV5 496 aa11.54□□□□□ -0.56
TIMP2-202ENST00000536189 PALD1Q9ULE6 856 aa11.54□□□□□ -0.56
TIMP2-202ENST00000536189 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
TIMP2-202ENST00000536189 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
TIMP2-202ENST00000536189 FNBP4Q8N3X1 1017 aaPredicted RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 ZBTB38Q8NAP3 1195 aaPredicted RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 SNAP23O00161 211 aa11.54□□□□□ -0.56
TIMP2-202ENST00000536189 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 JAG2Q9Y219 1238 aa11.54□□□□□ -0.56
TIMP2-202ENST00000536189 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.54□□□□□ -0.56
TIMP2-202ENST00000536189 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
TIMP2-202ENST00000536189 NEK4P51957 841 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 IFIT5Q13325 482 aaKnown RBP11.53□□□□□ -0.56
TIMP2-202ENST00000536189 UPF3BQ9BZI7 483 aaKnown RBP11.53□□□□□ -0.56
TIMP2-202ENST00000536189 EIF5P55010 431 aaKnown RBP11.53□□□□□ -0.56
TIMP2-202ENST00000536189 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 FAM227BQ96M60 508 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 EYA2O00167 538 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 MCCP23508 829 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 RABEP1Q15276 862 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 ATG9AQ7Z3C6 839 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 GREM2Q9H772 168 aa11.53□□□□□ -0.56
TIMP2-202ENST00000536189 CCNL1Q9UK58 526 aaPredicted RBP11.53□□□□□ -0.56
TIMP2-202ENST00000536189 CHGBP05060 677 aa11.52□□□□□ -0.57
TIMP2-202ENST00000536189 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 FOXD4L6Q3SYB3 417 aaPredicted RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 FOXD4L3Q6VB84 417 aaPredicted RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 EVI5LQ96CN4 794 aa11.52□□□□□ -0.57
TIMP2-202ENST00000536189 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
TIMP2-202ENST00000536189 NIP7Q9Y221 180 aaKnown RBP eCLIP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 PLCH1Q4KWH8 1693 aa11.52□□□□□ -0.57
TIMP2-202ENST00000536189 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 DDX46Q7L014 1031 aaKnown RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 SMARCC1Q92922 1105 aaPredicted RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 CNNM1Q9NRU3 951 aa11.52□□□□□ -0.57
TIMP2-202ENST00000536189 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
TIMP2-202ENST00000536189 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
TIMP2-202ENST00000536189 SGSM2O43147 1006 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 ITGA6P23229 1130 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
TIMP2-202ENST00000536189 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
TIMP2-202ENST00000536189 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 SNX21Q969T3 373 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
TIMP2-202ENST00000536189 A0A1B0GUL7 405 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 ST18O60284 1047 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
TIMP2-202ENST00000536189 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
TIMP2-202ENST00000536189 NMIQ13287 307 aaPredicted RBP11.5□□□□□ -0.57
TIMP2-202ENST00000536189 RUFY2Q8WXA3 655 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 N4BP2Q86UW6 1770 aaPredicted RBP11.5□□□□□ -0.57
TIMP2-202ENST00000536189 LRP6O75581 1613 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 ERVV-1B6SEH8 477 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 ZPR1O75312 459 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 APBA3O96018 575 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 PTH1RQ03431 593 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 SLFNL1Q499Z3 407 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 METTL24Q5JXM2 366 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 AK7Q96M32 723 aa11.5□□□□□ -0.57
TIMP2-202ENST00000536189 UBR2Q8IWV8 1755 aa11.49□□□□□ -0.57
TIMP2-202ENST00000536189 ARFGEF2Q9Y6D5 1785 aa11.49□□□□□ -0.57
TIMP2-202ENST00000536189 GOLIM4O00461 696 aa11.49□□□□□ -0.57
TIMP2-202ENST00000536189 CTSWP56202 376 aa11.49□□□□□ -0.57
TIMP2-202ENST00000536189 SECISBP2LQ93073 1101 aaKnown RBP11.49□□□□□ -0.57
TIMP2-202ENST00000536189 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms