RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 STARD3NLO95772 234 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-202ENST00000535906 VPS53Q5VIR6 699 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 NEUROD6Q96NK8 337 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 PDRG1Q9NUG6 133 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 LARGE1O95461 756 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 IL15P40933 162 aaPredicted RBP16.05■□□□□ 0.16
VPS33B-202ENST00000535906 ZNF445P59923 1031 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 CYP46A1Q9Y6A2 500 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 BCL9O00512 1426 aa16.05■□□□□ 0.16
VPS33B-202ENST00000535906 COL16A1Q07092 1604 aaPredicted RBP16.04■□□□□ 0.16
VPS33B-202ENST00000535906 EYA2O00167 538 aa16.04■□□□□ 0.16
VPS33B-202ENST00000535906 PUS3Q9BZE2 481 aaKnown RBP16.04■□□□□ 0.16
VPS33B-202ENST00000535906 EXOC5O00471 708 aa16.04■□□□□ 0.16
VPS33B-202ENST00000535906 TAF5LO75529 589 aa16.04■□□□□ 0.16
VPS33B-202ENST00000535906 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
VPS33B-202ENST00000535906 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
VPS33B-202ENST00000535906 DDX46Q7L014 1031 aaKnown RBP16.04■□□□□ 0.16
VPS33B-202ENST00000535906 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
VPS33B-202ENST00000535906 TAF6LQ9Y6J9 622 aa16.04■□□□□ 0.16
VPS33B-202ENST00000535906 ANO8Q9HCE9 1232 aaPredicted RBP16.03■□□□□ 0.16
VPS33B-202ENST00000535906 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
VPS33B-202ENST00000535906 JCADQ9P266 1359 aa16.03■□□□□ 0.16
VPS33B-202ENST00000535906 NCLP19338 710 aaKnown RBP16.03■□□□□ 0.16
VPS33B-202ENST00000535906 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
VPS33B-202ENST00000535906 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
VPS33B-202ENST00000535906 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
VPS33B-202ENST00000535906 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
VPS33B-202ENST00000535906 RPAP1Q9BWH6 1393 aaPredicted RBP16.03■□□□□ 0.16
VPS33B-202ENST00000535906 ZNF609O15014 1411 aa16.02■□□□□ 0.16
VPS33B-202ENST00000535906 CLCN1P35523 988 aa16.02■□□□□ 0.16
VPS33B-202ENST00000535906 HLFQ16534 295 aa16.02■□□□□ 0.16
VPS33B-202ENST00000535906 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
VPS33B-202ENST00000535906 AHDC1Q5TGY3 1603 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-202ENST00000535906 COL22A1Q8NFW1 1626 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-202ENST00000535906 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.15
VPS33B-202ENST00000535906 CIAO1O76071 339 aa16.02■□□□□ 0.15
VPS33B-202ENST00000535906 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-202ENST00000535906 CYP19A1P11511 503 aaPredicted RBP16.02■□□□□ 0.15
VPS33B-202ENST00000535906 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.15
VPS33B-202ENST00000535906 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.01■□□□□ 0.15
VPS33B-202ENST00000535906 NASPP49321 788 aaPredicted RBP16.01■□□□□ 0.15
VPS33B-202ENST00000535906 CCDC57Q2TAC2 916 aa16.01■□□□□ 0.15
VPS33B-202ENST00000535906 RNF20Q5VTR2 975 aa16.01■□□□□ 0.15
VPS33B-202ENST00000535906 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
VPS33B-202ENST00000535906 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
VPS33B-202ENST00000535906 KBTBD3Q8NAB2 608 aa16.01■□□□□ 0.15
VPS33B-202ENST00000535906 CCDC85AQ96PX6 553 aaPredicted RBP16.01■□□□□ 0.15
VPS33B-202ENST00000535906 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
VPS33B-202ENST00000535906 RFX7Q2KHR2 1363 aa16.01■□□□□ 0.15
VPS33B-202ENST00000535906 PLCH1Q4KWH8 1693 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 A0A1B0GUL7 405 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 DTNBO60941 627 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 CCDC83Q8IWF9 413 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
VPS33B-202ENST00000535906 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
VPS33B-202ENST00000535906 PSMA5P28066 241 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 ME3Q16798 604 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 FOXD4L6Q3SYB3 417 aaPredicted RBP16■□□□□ 0.15
VPS33B-202ENST00000535906 FOXD4L3Q6VB84 417 aaPredicted RBP16■□□□□ 0.15
VPS33B-202ENST00000535906 ZBTB1Q9Y2K1 713 aa16■□□□□ 0.15
VPS33B-202ENST00000535906 GOLIM4O00461 696 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 GPTP24298 496 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
VPS33B-202ENST00000535906 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 ST3GAL1Q11201 340 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 SLFNL1Q499Z3 407 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-202ENST00000535906 ZSCAN31Q96LW9 406 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-202ENST00000535906 PLA2G12BQ9BX93 195 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 PAG1Q9NWQ8 432 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 TPCN1Q9ULQ1 816 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 NSFL1CQ9UNZ2 370 aaKnown RBP15.99■□□□□ 0.15
VPS33B-202ENST00000535906 LRP6O75581 1613 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 CSF1RP07333 972 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 TSGA10IPQ3SY00 556 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 TCEANC2Q96MN5 208 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 SH2B1Q9NRF2 756 aaPredicted RBP15.99■□□□□ 0.15
VPS33B-202ENST00000535906 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
VPS33B-202ENST00000535906 ADAMTS2O95450 1211 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 SYT1P21579 422 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 BLOC1S2Q6QNY1 142 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 PPP1R9BQ96SB3 815 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 HMG20BQ9P0W2 317 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 PALLDQ8WX93 1383 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 NLRP10Q86W26 655 aa15.98■□□□□ 0.15
VPS33B-202ENST00000535906 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
VPS33B-202ENST00000535906 RBM27Q9P2N5 1060 aaKnown RBP15.98■□□□□ 0.15
VPS33B-202ENST00000535906 TCHHQ07283 1943 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 ESPNB1AK53 854 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 STX6O43752 255 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 NECAB1Q8N987 351 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
VPS33B-202ENST00000535906 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
VPS33B-202ENST00000535906 MBD3O95983 291 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms