RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PTPN12Q05209 780 aaKnown RBP28.33■■■□□ 2.12
RBFOX1-206ENST00000535565 NFIXQ14938 502 aa28.33■■■□□ 2.12
RBFOX1-206ENST00000535565 COL23A1Q86Y22 540 aaPredicted RBP28.33■■■□□ 2.12
RBFOX1-206ENST00000535565 TTLL11Q8NHH1 800 aa28.33■■■□□ 2.12
RBFOX1-206ENST00000535565 HCLS1P14317 486 aaPredicted RBP28.32■■■□□ 2.12
RBFOX1-206ENST00000535565 SLC15A2Q16348 729 aa28.32■■■□□ 2.12
RBFOX1-206ENST00000535565 KLHDC4Q8TBB5 520 aa28.32■■■□□ 2.12
RBFOX1-206ENST00000535565 RHPN1Q8TCX5 695 aa28.32■■■□□ 2.12
RBFOX1-206ENST00000535565 IFIT5Q13325 482 aaKnown RBP28.31■■■□□ 2.12
RBFOX1-206ENST00000535565 FAM161AQ3B820 660 aa28.31■■■□□ 2.12
RBFOX1-206ENST00000535565 ERFEQ4G0M1 354 aa28.31■■■□□ 2.12
RBFOX1-206ENST00000535565 SIL1Q9H173 461 aa28.31■■■□□ 2.12
RBFOX1-206ENST00000535565 PNPLA7Q6ZV29 1317 aa28.31■■■□□ 2.12
RBFOX1-206ENST00000535565 NPHP1O15259 732 aa28.3■■■□□ 2.12
RBFOX1-206ENST00000535565 BCL11AQ9H165 835 aa28.3■■■□□ 2.12
RBFOX1-206ENST00000535565 ANO8Q9HCE9 1232 aaPredicted RBP28.29■■■□□ 2.12
RBFOX1-206ENST00000535565 TAF7LQ5H9L4 462 aa28.28■■■□□ 2.12
RBFOX1-206ENST00000535565 CCDC85AQ96PX6 553 aaPredicted RBP28.28■■■□□ 2.12
RBFOX1-206ENST00000535565 ANKRD18BA2A2Z9 1011 aa28.28■■■□□ 2.12
RBFOX1-206ENST00000535565 CCDC152Q4G0S7 254 aa28.28■■■□□ 2.12
RBFOX1-206ENST00000535565 SLC10A5Q5PT55 438 aa28.28■■■□□ 2.12
RBFOX1-206ENST00000535565 NLGN1Q8N2Q7 840 aa28.28■■■□□ 2.12
RBFOX1-206ENST00000535565 ITGA6P23229 1130 aa28.27■■■□□ 2.12
RBFOX1-206ENST00000535565 GREM2Q9H772 168 aa28.27■■■□□ 2.12
RBFOX1-206ENST00000535565 TM4SF1P30408 202 aa28.26■■■□□ 2.11
RBFOX1-206ENST00000535565 IL1RAPL2Q9NP60 686 aa28.26■■■□□ 2.11
RBFOX1-206ENST00000535565 FBXO3Q9UK99 471 aa28.26■■■□□ 2.11
RBFOX1-206ENST00000535565 RTL9Q8NET4 1388 aa28.25■■■□□ 2.11
RBFOX1-206ENST00000535565 ABCC12Q96J65 1359 aa28.25■■■□□ 2.11
RBFOX1-206ENST00000535565 CNBD1Q8NA66 436 aa28.25■■■□□ 2.11
RBFOX1-206ENST00000535565 CLASRPQ8N2M8 674 aaKnown RBP28.24■■■□□ 2.11
RBFOX1-206ENST00000535565 CIAO1O76071 339 aa28.24■■■□□ 2.11
RBFOX1-206ENST00000535565 C16orf71Q8IYS4 520 aaPredicted RBP28.24■■■□□ 2.11
RBFOX1-206ENST00000535565 ZNF594Q96JF6 807 aaPredicted RBP28.24■■■□□ 2.11
RBFOX1-206ENST00000535565 EYA2O00167 538 aa28.23■■■□□ 2.11
RBFOX1-206ENST00000535565 SASH1O94885 1247 aa28.23■■■□□ 2.11
RBFOX1-206ENST00000535565 IL15P40933 162 aaPredicted RBP28.23■■■□□ 2.11
RBFOX1-206ENST00000535565 PLEKHM2Q8IWE5 1019 aa28.23■■■□□ 2.11
RBFOX1-206ENST00000535565 NLRP3Q96P20 1036 aa28.23■■■□□ 2.11
RBFOX1-206ENST00000535565 SERPINB2P05120 415 aa28.22■■■□□ 2.11
RBFOX1-206ENST00000535565 ST5P78524 1137 aa28.21■■■□□ 2.11
RBFOX1-206ENST00000535565 SF3B3Q15393 1217 aaKnown RBP28.21■■■□□ 2.11
RBFOX1-206ENST00000535565 RIC1Q4ADV7 1423 aa28.2■■■□□ 2.11
RBFOX1-206ENST00000535565 SPEF2Q9C093 1822 aa28.2■■■□□ 2.11
RBFOX1-206ENST00000535565 LRP5O75197 1615 aa28.2■■■□□ 2.11
RBFOX1-206ENST00000535565 POLRMTO00411 1230 aaKnown RBP28.2■■■□□ 2.1
RBFOX1-206ENST00000535565 OTUD7AQ8TE49 926 aaPredicted RBP28.2■■■□□ 2.1
RBFOX1-206ENST00000535565 TNRC6CQ9HCJ0 1690 aaKnown RBP28.19■■■□□ 2.1
RBFOX1-206ENST00000535565 NRXN2Q9P2S2 1712 aa28.19■■■□□ 2.1
RBFOX1-206ENST00000535565 DDR1Q08345 913 aa28.19■■■□□ 2.1
RBFOX1-206ENST00000535565 PRR5LQ6MZQ0 368 aa28.19■■■□□ 2.1
RBFOX1-206ENST00000535565 ATG9AQ7Z3C6 839 aa28.19■■■□□ 2.1
RBFOX1-206ENST00000535565 MX1P20591 662 aa28.18■■■□□ 2.1
RBFOX1-206ENST00000535565 LRRC24Q50LG9 513 aa28.18■■■□□ 2.1
RBFOX1-206ENST00000535565 LDHAL6AQ6ZMR3 332 aa28.18■■■□□ 2.1
RBFOX1-206ENST00000535565 IFIT2P09913 472 aaKnown RBP28.17■■■□□ 2.1
RBFOX1-206ENST00000535565 TFCP2Q12800 502 aa28.17■■■□□ 2.1
RBFOX1-206ENST00000535565 CDC5LQ99459 802 aaKnown RBP28.17■■■□□ 2.1
RBFOX1-206ENST00000535565 CNNM1Q9NRU3 951 aa28.17■■■□□ 2.1
RBFOX1-206ENST00000535565 SALL3Q9BXA9 1300 aa28.17■■■□□ 2.1
RBFOX1-206ENST00000535565 PDE1AP54750 535 aa28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 AACSQ86V21 672 aa28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 CCDC24Q8N4L8 307 aa28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 OSBPL3Q9H4L5 887 aa28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 IGHMBP2P38935 993 aaKnown RBP28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 C3orf67Q6ZVT6 689 aa28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 PUS3Q9BZE2 481 aaKnown RBP28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 PARP3Q9Y6F1 533 aa28.16■■■□□ 2.1
RBFOX1-206ENST00000535565 MPHOSPH8Q99549 860 aa28.15■■■□□ 2.1
RBFOX1-206ENST00000535565 SEC31BQ9NQW1 1179 aa28.15■■■□□ 2.1
RBFOX1-206ENST00000535565 CEP126Q9P2H0 1117 aa28.15■■■□□ 2.1
RBFOX1-206ENST00000535565 AOX1Q06278 1338 aa28.14■■■□□ 2.1
RBFOX1-206ENST00000535565 BMP2KLQ5H9B9 411 aa28.14■■■□□ 2.1
RBFOX1-206ENST00000535565 UPF1Q92900 1129 aaKnown RBP eCLIP28.14■■■□□ 2.1
RBFOX1-206ENST00000535565 GPATCH3Q96I76 525 aa28.14■■■□□ 2.1
RBFOX1-206ENST00000535565 STAP2Q9UGK3 403 aa28.14■■■□□ 2.1
RBFOX1-206ENST00000535565 MMP10P09238 476 aa28.13■■■□□ 2.09
RBFOX1-206ENST00000535565 TNNI3KQ59H18 835 aa28.13■■■□□ 2.09
RBFOX1-206ENST00000535565 MSL1Q68DK7 614 aa28.13■■■□□ 2.09
RBFOX1-206ENST00000535565 GPR108Q9NPR9 543 aa28.13■■■□□ 2.09
RBFOX1-206ENST00000535565 FPGT-TNNI3KV9GXZ4 949 aa28.13■■■□□ 2.09
RBFOX1-206ENST00000535565 TTC22Q5TAA0 569 aa28.12■■■□□ 2.09
RBFOX1-206ENST00000535565 EAF2Q96CJ1 260 aaPredicted RBP28.12■■■□□ 2.09
RBFOX1-206ENST00000535565 RIPOR2Q9Y4F9 1068 aa28.12■■■□□ 2.09
RBFOX1-206ENST00000535565 TAF1P21675 1872 aa28.12■■■□□ 2.09
RBFOX1-206ENST00000535565 METTL24Q5JXM2 366 aa28.11■■■□□ 2.09
RBFOX1-206ENST00000535565 ANKRD18AQ8IVF6 992 aa28.11■■■□□ 2.09
RBFOX1-206ENST00000535565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.11■■■□□ 2.09
RBFOX1-206ENST00000535565 TTC41PQ6P2S7 1318 aa28.11■■■□□ 2.09
RBFOX1-206ENST00000535565 AKAP2Q9Y2D5 859 aa28.11■■■□□ 2.09
RBFOX1-206ENST00000535565 MROH5Q6ZUA9 1318 aa28.11■■■□□ 2.09
RBFOX1-206ENST00000535565 DDX46Q7L014 1031 aaKnown RBP28.1■■■□□ 2.09
RBFOX1-206ENST00000535565 ANKRD31Q8N7Z5 1873 aa28.09■■■□□ 2.09
RBFOX1-206ENST00000535565 CCDC8Q9H0W5 538 aaPredicted RBP28.09■■■□□ 2.09
RBFOX1-206ENST00000535565 ZNF609O15014 1411 aa28.09■■■□□ 2.09
RBFOX1-206ENST00000535565 SLC16A10Q8TF71 515 aa28.08■■■□□ 2.09
RBFOX1-206ENST00000535565 ERC2O15083 957 aa28.07■■■□□ 2.08
RBFOX1-206ENST00000535565 ECHDC1Q9NTX5 307 aa28.07■■■□□ 2.08
RBFOX1-206ENST00000535565 GSPT1P15170 499 aaKnown RBP28.07■■■□□ 2.08
RBFOX1-206ENST00000535565 TSHZ3Q63HK5 1081 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms