RNA–Protein interactions for RNA: ENST00000535462.5

PTPN6-206, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-206ENST00000535462 CIAPIN1Q6FI81 312 aa20.6■□□□□ 0.89
PTPN6-206ENST00000535462 PGAP2Q9UHJ9 254 aa20.6■□□□□ 0.89
PTPN6-206ENST00000535462 TLL2Q9Y6L7 1015 aa20.6■□□□□ 0.89
PTPN6-206ENST00000535462 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
PTPN6-206ENST00000535462 BEGAINQ9BUH8 593 aa20.59■□□□□ 0.89
PTPN6-206ENST00000535462 MAP2K2P36507 400 aa20.58■□□□□ 0.89
PTPN6-206ENST00000535462 LBX1P52954 281 aa20.58■□□□□ 0.89
PTPN6-206ENST00000535462 PLBD2Q8NHP8 589 aa20.58■□□□□ 0.89
PTPN6-206ENST00000535462 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
PTPN6-206ENST00000535462 CAPNS2Q96L46 248 aa20.58■□□□□ 0.89
PTPN6-206ENST00000535462 DBF4Q9UBU7 674 aaPredicted RBP20.58■□□□□ 0.89
PTPN6-206ENST00000535462 DDX60Q8IY21 1712 aaKnown RBP20.58■□□□□ 0.88
PTPN6-206ENST00000535462 ANXA1P04083 346 aa20.57■□□□□ 0.88
PTPN6-206ENST00000535462 HSPA8P11142 646 aaKnown RBP20.57■□□□□ 0.88
PTPN6-206ENST00000535462 AIMP1Q12904 312 aaKnown RBP20.57■□□□□ 0.88
PTPN6-206ENST00000535462 CA12O43570 354 aa20.56■□□□□ 0.88
PTPN6-206ENST00000535462 HCLS1P14317 486 aaPredicted RBP20.56■□□□□ 0.88
PTPN6-206ENST00000535462 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
PTPN6-206ENST00000535462 SF3B3Q15393 1217 aaKnown RBP20.56■□□□□ 0.88
PTPN6-206ENST00000535462 HDGFL1Q5TGJ6 251 aa20.56■□□□□ 0.88
PTPN6-206ENST00000535462 CST9Q5W186 159 aa20.56■□□□□ 0.88
PTPN6-206ENST00000535462 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
PTPN6-206ENST00000535462 DUOX1Q9NRD9 1551 aa20.55■□□□□ 0.88
PTPN6-206ENST00000535462 GMPSP49915 693 aaPredicted RBP20.55■□□□□ 0.88
PTPN6-206ENST00000535462 TRIM28Q13263 835 aaKnown RBP20.55■□□□□ 0.88
PTPN6-206ENST00000535462 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
PTPN6-206ENST00000535462 ANKRD13DQ6ZTN6 518 aa20.55■□□□□ 0.88
PTPN6-206ENST00000535462 DPF2Q92785 391 aa20.55■□□□□ 0.88
PTPN6-206ENST00000535462 GPR101Q96P66 508 aaPredicted RBP20.55■□□□□ 0.88
PTPN6-206ENST00000535462 HYPKQ9NX55 129 aa20.55■□□□□ 0.88
PTPN6-206ENST00000535462 CDC37L1Q7L3B6 337 aa20.54■□□□□ 0.88
PTPN6-206ENST00000535462 SAPCD2Q86UD0 394 aa20.54■□□□□ 0.88
PTPN6-206ENST00000535462 CFAP44Q96MT7 982 aa20.54■□□□□ 0.88
PTPN6-206ENST00000535462 ISCA1Q9BUE6 129 aa20.54■□□□□ 0.88
PTPN6-206ENST00000535462 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
PTPN6-206ENST00000535462 H7C1D1 291 aa20.53■□□□□ 0.88
PTPN6-206ENST00000535462 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
PTPN6-206ENST00000535462 CHMP4AQ9BY43 222 aa20.53■□□□□ 0.88
PTPN6-206ENST00000535462 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
PTPN6-206ENST00000535462 RPS12P25398 132 aaKnown RBP20.52■□□□□ 0.88
PTPN6-206ENST00000535462 SLC51AQ86UW1 340 aa20.52■□□□□ 0.88
PTPN6-206ENST00000535462 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
PTPN6-206ENST00000535462 TRAF5O00463 557 aa20.51■□□□□ 0.87
PTPN6-206ENST00000535462 CELF2O95319 508 aaKnown RBP20.51■□□□□ 0.87
PTPN6-206ENST00000535462 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
PTPN6-206ENST00000535462 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
PTPN6-206ENST00000535462 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
PTPN6-206ENST00000535462 EYA3Q99504 573 aa20.51■□□□□ 0.87
PTPN6-206ENST00000535462 CNOT7Q9UIV1 285 aaKnown RBP20.51■□□□□ 0.87
PTPN6-206ENST00000535462 TAF1P21675 1872 aa20.5■□□□□ 0.87
PTPN6-206ENST00000535462 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
PTPN6-206ENST00000535462 CALD1Q05682 793 aaKnown RBP20.5■□□□□ 0.87
PTPN6-206ENST00000535462 RAD17O75943 681 aa20.49■□□□□ 0.87
PTPN6-206ENST00000535462 CCDC146Q8IYE0 955 aa20.49■□□□□ 0.87
PTPN6-206ENST00000535462 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
PTPN6-206ENST00000535462 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
PTPN6-206ENST00000535462 FMR1Q06787 632 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTPN6-206ENST00000535462 KRT24Q2M2I5 525 aa20.48■□□□□ 0.87
PTPN6-206ENST00000535462 ABHD8Q96I13 439 aa20.48■□□□□ 0.87
PTPN6-206ENST00000535462 GLIS2Q9BZE0 524 aaPredicted RBP20.48■□□□□ 0.87
PTPN6-206ENST00000535462 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
PTPN6-206ENST00000535462 ZNF609O15014 1411 aa20.47■□□□□ 0.87
PTPN6-206ENST00000535462 NOGQ13253 232 aa20.47■□□□□ 0.87
PTPN6-206ENST00000535462 DUSP27Q5VZP5 1158 aa20.47■□□□□ 0.87
PTPN6-206ENST00000535462 MICALL2Q8IY33 904 aa20.47■□□□□ 0.87
PTPN6-206ENST00000535462 ZBTB38Q8NAP3 1195 aaPredicted RBP20.47■□□□□ 0.87
PTPN6-206ENST00000535462 FAM89AQ96GI7 184 aa20.47■□□□□ 0.87
PTPN6-206ENST00000535462 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
PTPN6-206ENST00000535462 IRS4O14654 1257 aaPredicted RBP20.46■□□□□ 0.87
PTPN6-206ENST00000535462 HIRAP54198 1017 aaPredicted RBP20.46■□□□□ 0.87
PTPN6-206ENST00000535462 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
PTPN6-206ENST00000535462 TRPM4Q8TD43 1214 aa20.46■□□□□ 0.87
PTPN6-206ENST00000535462 CELF1Q92879 486 aaKnown RBP20.46■□□□□ 0.87
PTPN6-206ENST00000535462 RPS8P62241 208 aaKnown RBP20.45■□□□□ 0.86
PTPN6-206ENST00000535462 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
PTPN6-206ENST00000535462 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
PTPN6-206ENST00000535462 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 PSMD14O00487 310 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 GNAI1P63096 354 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 GRM1Q13255 1194 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 CCDC191Q8NCU4 936 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
PTPN6-206ENST00000535462 ATP5J2-PTCD1G3V325 749 aa20.43■□□□□ 0.86
PTPN6-206ENST00000535462 ECE2O60344 883 aa20.43■□□□□ 0.86
PTPN6-206ENST00000535462 DDX10Q13206 875 aaKnown RBP20.43■□□□□ 0.86
PTPN6-206ENST00000535462 RIC3Q7Z5B4 369 aa20.43■□□□□ 0.86
PTPN6-206ENST00000535462 ZC3H12CQ9C0D7 883 aaKnown RBP20.43■□□□□ 0.86
PTPN6-206ENST00000535462 POLLQ9UGP5 575 aa20.43■□□□□ 0.86
PTPN6-206ENST00000535462 PSME4Q14997 1843 aa20.42■□□□□ 0.86
PTPN6-206ENST00000535462 CCDC152Q4G0S7 254 aa20.42■□□□□ 0.86
PTPN6-206ENST00000535462 TBC1D16Q8TBP0 767 aa20.42■□□□□ 0.86
PTPN6-206ENST00000535462 DBNDD1Q9H9R9 158 aa20.42■□□□□ 0.86
PTPN6-206ENST00000535462 AOC2O75106 756 aa20.41■□□□□ 0.86
PTPN6-206ENST00000535462 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
PTPN6-206ENST00000535462 GPSM2P81274 684 aa20.41■□□□□ 0.86
PTPN6-206ENST00000535462 DCPSQ96C86 337 aaKnown RBP20.41■□□□□ 0.86
PTPN6-206ENST00000535462 ZNF408Q9H9D4 720 aa20.41■□□□□ 0.86
PTPN6-206ENST00000535462 PDE8AO60658 829 aa20.4■□□□□ 0.86
PTPN6-206ENST00000535462 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms