RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.61
CLIP1-206ENST00000535290 TNIP1Q15025 636 aa11.21□□□□□ -0.61
CLIP1-206ENST00000535290 RTFDC1Q9BY42 306 aaPredicted RBP11.21□□□□□ -0.61
CLIP1-206ENST00000535290 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
CLIP1-206ENST00000535290 TRIOBPQ9H2D6 2365 aa11.2□□□□□ -0.62
CLIP1-206ENST00000535290 CEMIPQ8WUJ3 1361 aa11.2□□□□□ -0.62
CLIP1-206ENST00000535290 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
CLIP1-206ENST00000535290 TBC1D10BQ4KMP7 808 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-206ENST00000535290 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-206ENST00000535290 FBXO46Q6PJ61 603 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-206ENST00000535290 RASAL3Q86YV0 1011 aa11.2□□□□□ -0.62
CLIP1-206ENST00000535290 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
CLIP1-206ENST00000535290 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 POTEFA5A3E0 1075 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 DLL1O00548 723 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
CLIP1-206ENST00000535290 GPTP24298 496 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
CLIP1-206ENST00000535290 SUSD4Q5VX71 490 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 SUPT20HQ8NEM7 779 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
CLIP1-206ENST00000535290 GPR25O00155 361 aa11.18□□□□□ -0.62
CLIP1-206ENST00000535290 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-206ENST00000535290 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-206ENST00000535290 NGEFQ8N5V2 710 aa11.18□□□□□ -0.62
CLIP1-206ENST00000535290 DPF2Q92785 391 aa11.18□□□□□ -0.62
CLIP1-206ENST00000535290 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
CLIP1-206ENST00000535290 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
CLIP1-206ENST00000535290 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
CLIP1-206ENST00000535290 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
CLIP1-206ENST00000535290 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-206ENST00000535290 ABCB7O75027 752 aa11.17□□□□□ -0.62
CLIP1-206ENST00000535290 ATXN8OSP0DMR3 200 aa11.17□□□□□ -0.62
CLIP1-206ENST00000535290 MPNDQ8N594 471 aa11.17□□□□□ -0.62
CLIP1-206ENST00000535290 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
CLIP1-206ENST00000535290 CEP290O15078 2479 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 ABCC4O15439 1325 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 MKI67P46013 3256 aaKnown RBP11.16□□□□□ -0.62
CLIP1-206ENST00000535290 ERVV-1B6SEH8 477 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 PSMD14O00487 310 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 NTSR2O95665 410 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 TTLL7Q6ZT98 887 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 SP8Q8IXZ3 490 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 CDCA5Q96FF9 252 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 PHACTR3Q96KR7 559 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 R3HDMLQ9H3Y0 253 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
CLIP1-206ENST00000535290 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 MAP3K15Q6ZN16 1313 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
CLIP1-206ENST00000535290 MOB2Q70IA6 237 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 ZNF34Q8IZ26 560 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 KCNQ5Q9NR82 932 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 GGA3Q9NZ52 723 aa11.15□□□□□ -0.62
CLIP1-206ENST00000535290 SIPA1L3O60292 1781 aaPredicted RBP11.15□□□□□ -0.62
CLIP1-206ENST00000535290 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.63
CLIP1-206ENST00000535290 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
CLIP1-206ENST00000535290 BBOX1O75936 387 aa11.14□□□□□ -0.63
CLIP1-206ENST00000535290 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
CLIP1-206ENST00000535290 DBNDD1Q9H9R9 158 aa11.14□□□□□ -0.63
CLIP1-206ENST00000535290 FKTNO75072 461 aa11.13□□□□□ -0.63
CLIP1-206ENST00000535290 EN2P19622 333 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-206ENST00000535290 TM4SF4P48230 202 aa11.13□□□□□ -0.63
CLIP1-206ENST00000535290 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
CLIP1-206ENST00000535290 SLC10A5Q5PT55 438 aa11.13□□□□□ -0.63
CLIP1-206ENST00000535290 MCM10Q7L590 875 aa11.13□□□□□ -0.63
CLIP1-206ENST00000535290 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
CLIP1-206ENST00000535290 UBE2Q2LH0YL09 131 aa11.12□□□□□ -0.63
CLIP1-206ENST00000535290 RPS12P25398 132 aaKnown RBP11.12□□□□□ -0.63
CLIP1-206ENST00000535290 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
CLIP1-206ENST00000535290 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
CLIP1-206ENST00000535290 RRP7AQ9Y3A4 280 aaKnown RBP11.12□□□□□ -0.63
CLIP1-206ENST00000535290 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
CLIP1-206ENST00000535290 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
CLIP1-206ENST00000535290 FKBP1BP68106 108 aa11.11□□□□□ -0.63
CLIP1-206ENST00000535290 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
CLIP1-206ENST00000535290 DCTN1Q14203 1278 aa11.11□□□□□ -0.63
CLIP1-206ENST00000535290 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
CLIP1-206ENST00000535290 KIF6Q6ZMV9 814 aa11.11□□□□□ -0.63
CLIP1-206ENST00000535290 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
CLIP1-206ENST00000535290 SCAF8Q9UPN6 1271 aaKnown RBP11.11□□□□□ -0.63
CLIP1-206ENST00000535290 TRIM17Q9Y577 477 aa11.11□□□□□ -0.63
CLIP1-206ENST00000535290 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
CLIP1-206ENST00000535290 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 SCARF1Q14162 830 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 OTOP1Q7RTM1 612 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 PPP1R42Q7Z4L9 355 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
CLIP1-206ENST00000535290 UTP14AQ9BVJ6 771 aaKnown RBP11.1□□□□□ -0.63
CLIP1-206ENST00000535290 DUOX1Q9NRD9 1551 aa11.09□□□□□ -0.63
CLIP1-206ENST00000535290 H0YGN5 161 aa11.09□□□□□ -0.63
CLIP1-206ENST00000535290 MYL6BP14649 208 aa11.09□□□□□ -0.63
CLIP1-206ENST00000535290 GRAPQ13588 217 aa11.09□□□□□ -0.63
CLIP1-206ENST00000535290 PRAMEF18Q5VWM3 479 aa11.09□□□□□ -0.63
CLIP1-206ENST00000535290 GIGYF2Q6Y7W6 1299 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms