RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 LAMB2P55268 1798 aa25■■□□□ 1.59
TNFRSF1A-205ENST00000534885 SEC24BO95487 1268 aa25■■□□□ 1.59
TNFRSF1A-205ENST00000534885 COL24A1Q17RW2 1714 aa25■■□□□ 1.59
TNFRSF1A-205ENST00000534885 ATG9AQ7Z3C6 839 aa25■■□□□ 1.59
TNFRSF1A-205ENST00000534885 TUBGCP6Q96RT7 1819 aa24.99■■□□□ 1.59
TNFRSF1A-205ENST00000534885 IFIT5Q13325 482 aaKnown RBP24.99■■□□□ 1.59
TNFRSF1A-205ENST00000534885 EAF2Q96CJ1 260 aaPredicted RBP24.99■■□□□ 1.59
TNFRSF1A-205ENST00000534885 SSFA2P28290 1259 aa24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 TFCP2Q12800 502 aa24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 LRRC24Q50LG9 513 aa24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 AACSQ86V21 672 aa24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 ITGA6P23229 1130 aa24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 SETDB2Q96T68 719 aa24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 PUS3Q9BZE2 481 aaKnown RBP24.98■■□□□ 1.59
TNFRSF1A-205ENST00000534885 RGPD3A6NKT7 1758 aaPredicted RBP24.97■■□□□ 1.59
TNFRSF1A-205ENST00000534885 RGPD4Q7Z3J3 1758 aa24.97■■□□□ 1.59
TNFRSF1A-205ENST00000534885 EYA2O00167 538 aa24.97■■□□□ 1.59
TNFRSF1A-205ENST00000534885 SDSP20132 328 aa24.97■■□□□ 1.59
TNFRSF1A-205ENST00000534885 ZNF827Q17R98 1081 aa24.97■■□□□ 1.59
TNFRSF1A-205ENST00000534885 ERFEQ4G0M1 354 aa24.97■■□□□ 1.59
TNFRSF1A-205ENST00000534885 IFIT2P09913 472 aaKnown RBP24.96■■□□□ 1.59
TNFRSF1A-205ENST00000534885 CCDC8Q9H0W5 538 aaPredicted RBP24.95■■□□□ 1.59
TNFRSF1A-205ENST00000534885 TLR7Q9NYK1 1049 aaKnown RBP24.95■■□□□ 1.59
TNFRSF1A-205ENST00000534885 AOX1Q06278 1338 aa24.95■■□□□ 1.58
TNFRSF1A-205ENST00000534885 TAF7LQ5H9L4 462 aa24.95■■□□□ 1.58
TNFRSF1A-205ENST00000534885 PI4K2BQ8TCG2 481 aa24.95■■□□□ 1.58
TNFRSF1A-205ENST00000534885 CASZ1Q86V15 1759 aa24.94■■□□□ 1.58
TNFRSF1A-205ENST00000534885 CIAO1O76071 339 aa24.94■■□□□ 1.58
TNFRSF1A-205ENST00000534885 IL15P40933 162 aaPredicted RBP24.94■■□□□ 1.58
TNFRSF1A-205ENST00000534885 ANKRD18BA2A2Z9 1011 aa24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 TNNI3KQ59H18 835 aa24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 FPGT-TNNI3KV9GXZ4 949 aa24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 ABCC12Q96J65 1359 aa24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 GYS1P13807 737 aa24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 HMGB2P26583 209 aaKnown RBP24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 NBPF5PQ86XG9 351 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF1A-205ENST00000534885 NFIXQ14938 502 aa24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 TBC1D9Q6ZT07 1266 aa24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 TFCP2L1Q9NZI6 479 aa24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 HSP90B1P14625 803 aaKnown RBP24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 GTF2E1P29083 439 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 NYXQ9GZU5 481 aa24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 TTC41PQ6P2S7 1318 aa24.92■■□□□ 1.58
TNFRSF1A-205ENST00000534885 C3orf67Q6ZVT6 689 aa24.91■■□□□ 1.58
TNFRSF1A-205ENST00000534885 FBXO3Q9UK99 471 aa24.91■■□□□ 1.58
TNFRSF1A-205ENST00000534885 CDC45O75419 566 aa24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 SEC31BQ9NQW1 1179 aa24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 ECHDC1Q9NTX5 307 aa24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 EN1Q05925 392 aaPredicted RBP24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 CCDC152Q4G0S7 254 aa24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 LDHAL6AQ6ZMR3 332 aa24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 DBNLQ9UJU6 430 aaKnown RBP24.9■■□□□ 1.58
TNFRSF1A-205ENST00000534885 CARMIL3Q8ND23 1372 aa24.89■■□□□ 1.58
TNFRSF1A-205ENST00000534885 CCDC24Q8N4L8 307 aa24.89■■□□□ 1.58
TNFRSF1A-205ENST00000534885 GPATCH3Q96I76 525 aa24.89■■□□□ 1.58
TNFRSF1A-205ENST00000534885 LRP5O75197 1615 aa24.89■■□□□ 1.58
TNFRSF1A-205ENST00000534885 EZH2Q15910 746 aaKnown RBP24.89■■□□□ 1.57
TNFRSF1A-205ENST00000534885 TPTE2Q6XPS3 522 aa24.89■■□□□ 1.57
TNFRSF1A-205ENST00000534885 RIPOR2Q9Y4F9 1068 aa24.89■■□□□ 1.57
TNFRSF1A-205ENST00000534885 RIC1Q4ADV7 1423 aa24.88■■□□□ 1.57
TNFRSF1A-205ENST00000534885 TRIM6-TRIM34B2RNG4 842 aa24.88■■□□□ 1.57
TNFRSF1A-205ENST00000534885 SLC10A5Q5PT55 438 aa24.88■■□□□ 1.57
TNFRSF1A-205ENST00000534885 CAMKK2Q96RR4 588 aa24.88■■□□□ 1.57
TNFRSF1A-205ENST00000534885 COL4A1P02462 1669 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 GLRX3O76003 335 aaKnown RBP24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 MAP4K4O95819 1239 aaPredicted RBP24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 CEP126Q9P2H0 1117 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 SPEF2Q9C093 1822 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 RTL9Q8NET4 1388 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 RILPL2Q969X0 211 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 DBNDD2Q9BQY9 259 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 GPR108Q9NPR9 543 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 CNNM1Q9NRU3 951 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 ZNF609O15014 1411 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 AK9Q5TCS8 1911 aa24.87■■□□□ 1.57
TNFRSF1A-205ENST00000534885 ERC2O15083 957 aa24.86■■□□□ 1.57
TNFRSF1A-205ENST00000534885 MFAP1P55081 439 aaKnown RBP24.86■■□□□ 1.57
TNFRSF1A-205ENST00000534885 COL23A1Q86Y22 540 aaPredicted RBP24.86■■□□□ 1.57
TNFRSF1A-205ENST00000534885 TIMM10P62072 90 aa24.85■■□□□ 1.57
TNFRSF1A-205ENST00000534885 SF3B3Q15393 1217 aaKnown RBP24.85■■□□□ 1.57
TNFRSF1A-205ENST00000534885 TAF1P21675 1872 aa24.85■■□□□ 1.57
TNFRSF1A-205ENST00000534885 NEUROD6Q96NK8 337 aa24.84■■□□□ 1.57
TNFRSF1A-205ENST00000534885 A0A1B0GUL7 405 aa24.84■■□□□ 1.57
TNFRSF1A-205ENST00000534885 NPHP1O15259 732 aa24.84■■□□□ 1.57
TNFRSF1A-205ENST00000534885 METTL24Q5JXM2 366 aa24.84■■□□□ 1.57
TNFRSF1A-205ENST00000534885 ILDR1Q86SU0 546 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF1A-205ENST00000534885 TNRC6CQ9HCJ0 1690 aaKnown RBP24.84■■□□□ 1.57
TNFRSF1A-205ENST00000534885 MSH5O43196 834 aa24.83■■□□□ 1.57
TNFRSF1A-205ENST00000534885 TM4SF1P30408 202 aa24.83■■□□□ 1.57
TNFRSF1A-205ENST00000534885 ANO8Q9HCE9 1232 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF1A-205ENST00000534885 CNBD1Q8NA66 436 aa24.82■■□□□ 1.56
TNFRSF1A-205ENST00000534885 PNPLA7Q6ZV29 1317 aa24.82■■□□□ 1.56
TNFRSF1A-205ENST00000534885 VGLL2Q8N8G2 317 aa24.82■■□□□ 1.56
TNFRSF1A-205ENST00000534885 NLRP3Q96P20 1036 aa24.82■■□□□ 1.56
TNFRSF1A-205ENST00000534885 UPF2Q9HAU5 1272 aaKnown RBP24.82■■□□□ 1.56
TNFRSF1A-205ENST00000534885 MPHOSPH8Q99549 860 aa24.81■■□□□ 1.56
TNFRSF1A-205ENST00000534885 BOLA2Q9H3K6 86 aa24.81■■□□□ 1.56
TNFRSF1A-205ENST00000534885 DDR1Q08345 913 aa24.81■■□□□ 1.56
TNFRSF1A-205ENST00000534885 PRR5LQ6MZQ0 368 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms