RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ADAMTSL1Q8N6G6 1762 aa24.34■■□□□ 1.49
NDUFS3-213ENST00000534716 PPIP5K2O43314 1243 aa24.33■■□□□ 1.49
NDUFS3-213ENST00000534716 DPP8Q6V1X1 898 aaPredicted RBP24.33■■□□□ 1.49
NDUFS3-213ENST00000534716 WWC1Q8IX03 1113 aa24.33■■□□□ 1.49
NDUFS3-213ENST00000534716 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
NDUFS3-213ENST00000534716 MPNDQ8N594 471 aa24.33■■□□□ 1.49
NDUFS3-213ENST00000534716 ITGBL1O95965 494 aaPredicted RBP24.32■■□□□ 1.48
NDUFS3-213ENST00000534716 AOC3Q16853 763 aa24.32■■□□□ 1.48
NDUFS3-213ENST00000534716 DDX60Q8IY21 1712 aaKnown RBP24.32■■□□□ 1.48
NDUFS3-213ENST00000534716 IL16Q14005 1332 aa24.32■■□□□ 1.48
NDUFS3-213ENST00000534716 EAPPQ56P03 285 aaPredicted RBP24.31■■□□□ 1.48
NDUFS3-213ENST00000534716 ZBTB38Q8NAP3 1195 aaPredicted RBP24.31■■□□□ 1.48
NDUFS3-213ENST00000534716 GJA3Q9Y6H8 435 aa24.31■■□□□ 1.48
NDUFS3-213ENST00000534716 IRS4O14654 1257 aaPredicted RBP24.3■■□□□ 1.48
NDUFS3-213ENST00000534716 SCNN1DP51172 638 aa24.3■■□□□ 1.48
NDUFS3-213ENST00000534716 KIAA2012Q0VF49 1180 aa24.3■■□□□ 1.48
NDUFS3-213ENST00000534716 TSPYL6Q8N831 410 aa24.3■■□□□ 1.48
NDUFS3-213ENST00000534716 CCDC191Q8NCU4 936 aa24.3■■□□□ 1.48
NDUFS3-213ENST00000534716 ZNRF3Q9ULT6 936 aa24.3■■□□□ 1.48
NDUFS3-213ENST00000534716 ANP32CO43423 234 aa24.29■■□□□ 1.48
NDUFS3-213ENST00000534716 DDX58O95786 925 aaKnown RBP24.29■■□□□ 1.48
NDUFS3-213ENST00000534716 HSP90B1P14625 803 aaKnown RBP24.29■■□□□ 1.48
NDUFS3-213ENST00000534716 TNS4Q8IZW8 715 aa24.29■■□□□ 1.48
NDUFS3-213ENST00000534716 ZNF428Q96B54 188 aa24.29■■□□□ 1.48
NDUFS3-213ENST00000534716 LMOD1P29536 600 aaPredicted RBP24.28■■□□□ 1.48
NDUFS3-213ENST00000534716 TSR2Q969E8 191 aaKnown RBP24.28■■□□□ 1.48
NDUFS3-213ENST00000534716 METTL22Q9BUU2 404 aaPredicted RBP24.28■■□□□ 1.48
NDUFS3-213ENST00000534716 MRS2Q9HD23 443 aa24.28■■□□□ 1.48
NDUFS3-213ENST00000534716 LRRC37AA6NMS7 1700 aa24.27■■□□□ 1.48
NDUFS3-213ENST00000534716 CELF1Q92879 486 aaKnown RBP24.27■■□□□ 1.48
NDUFS3-213ENST00000534716 MYD88Q99836 296 aa24.27■■□□□ 1.48
NDUFS3-213ENST00000534716 CLEC11AQ9Y240 323 aa24.27■■□□□ 1.48
NDUFS3-213ENST00000534716 DUOX1Q9NRD9 1551 aa24.26■■□□□ 1.47
NDUFS3-213ENST00000534716 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
NDUFS3-213ENST00000534716 CXCL9Q07325 125 aa24.26■■□□□ 1.47
NDUFS3-213ENST00000534716 LTBP1Q14766 1721 aa24.26■■□□□ 1.47
NDUFS3-213ENST00000534716 EPS15P42566 896 aa24.25■■□□□ 1.47
NDUFS3-213ENST00000534716 RTL5Q5HYW3 569 aaPredicted RBP24.25■■□□□ 1.47
NDUFS3-213ENST00000534716 USP50Q70EL3 339 aaPredicted RBP24.25■■□□□ 1.47
NDUFS3-213ENST00000534716 CNTROBQ8N137 903 aa24.25■■□□□ 1.47
NDUFS3-213ENST00000534716 CWC25Q9NXE8 425 aaPredicted RBP24.25■■□□□ 1.47
NDUFS3-213ENST00000534716 KSR2Q6VAB6 950 aa24.24■■□□□ 1.47
NDUFS3-213ENST00000534716 TMEM88BA6NKF7 163 aa24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 RPS8P62241 208 aaKnown RBP24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 TWISTNBQ3B726 338 aaPredicted RBP24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 MAP1SQ66K74 1059 aaPredicted RBP24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 GPRC5DQ9NZD1 345 aa24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 CDHR2Q9BYE9 1310 aa24.23■■□□□ 1.47
NDUFS3-213ENST00000534716 CIAPIN1Q6FI81 312 aa24.22■■□□□ 1.47
NDUFS3-213ENST00000534716 ADARB2Q9NS39 739 aaKnown RBP24.22■■□□□ 1.47
NDUFS3-213ENST00000534716 MAP3K2Q9Y2U5 619 aa24.22■■□□□ 1.47
NDUFS3-213ENST00000534716 CNTNAP1P78357 1384 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 PI4KAP2A4QPH2 592 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 PDE8AO60658 829 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 TNIP1Q15025 636 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 WDR63Q8IWG1 891 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 PI4KAP1Q8N8J0 262 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 TAF1P21675 1872 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 COL4A1P02462 1669 aa24.21■■□□□ 1.47
NDUFS3-213ENST00000534716 IGKV5-2P06315 115 aa24.2■■□□□ 1.46
NDUFS3-213ENST00000534716 WASHC4Q2M389 1173 aa24.2■■□□□ 1.46
NDUFS3-213ENST00000534716 CCDC152Q4G0S7 254 aa24.2■■□□□ 1.46
NDUFS3-213ENST00000534716 PODXL2Q9NZ53 605 aa24.2■■□□□ 1.46
NDUFS3-213ENST00000534716 NSFL1CQ9UNZ2 370 aaKnown RBP24.2■■□□□ 1.46
NDUFS3-213ENST00000534716 YDJCA8MPS7 323 aa24.19■■□□□ 1.46
NDUFS3-213ENST00000534716 GPSM2P81274 684 aa24.19■■□□□ 1.46
NDUFS3-213ENST00000534716 SEC31BQ9NQW1 1179 aa24.19■■□□□ 1.46
NDUFS3-213ENST00000534716 POLLQ9UGP5 575 aa24.19■■□□□ 1.46
NDUFS3-213ENST00000534716 MKRN1Q9UHC7 482 aaKnown RBP24.19■■□□□ 1.46
NDUFS3-213ENST00000534716 FANCIQ9NVI1 1328 aa24.18■■□□□ 1.46
NDUFS3-213ENST00000534716 SLC4A2P04920 1241 aa24.18■■□□□ 1.46
NDUFS3-213ENST00000534716 GMPSP49915 693 aaPredicted RBP24.18■■□□□ 1.46
NDUFS3-213ENST00000534716 RAD17O75943 681 aa24.17■■□□□ 1.46
NDUFS3-213ENST00000534716 EYA3Q99504 573 aa24.17■■□□□ 1.46
NDUFS3-213ENST00000534716 NEXNQ0ZGT2 675 aa24.16■■□□□ 1.46
NDUFS3-213ENST00000534716 G2E3Q7L622 706 aa24.16■■□□□ 1.46
NDUFS3-213ENST00000534716 TBC1D16Q8TBP0 767 aa24.16■■□□□ 1.46
NDUFS3-213ENST00000534716 PGAP2Q9UHJ9 254 aa24.16■■□□□ 1.46
NDUFS3-213ENST00000534716 RASSF10A6NK89 507 aa24.15■■□□□ 1.46
NDUFS3-213ENST00000534716 HSPA1AP0DMV8 641 aaKnown RBP24.15■■□□□ 1.46
NDUFS3-213ENST00000534716 HSPA1BP0DMV9 641 aaKnown RBP24.15■■□□□ 1.46
NDUFS3-213ENST00000534716 NEURL1BA8MQ27 555 aa24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 C6orf229H3BNL8 230 aa24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 VAMP4O75379 141 aa24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 ZC3H15Q8WU90 426 aaKnown RBP24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 DPF2Q92785 391 aa24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 JARID2Q92833 1246 aaPredicted RBP24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 BCL2L13Q9BXK5 485 aa24.14■■□□□ 1.45
NDUFS3-213ENST00000534716 CTSWP56202 376 aa24.13■■□□□ 1.45
NDUFS3-213ENST00000534716 FLIIQ13045 1269 aa24.13■■□□□ 1.45
NDUFS3-213ENST00000534716 RTL9Q8NET4 1388 aa24.13■■□□□ 1.45
NDUFS3-213ENST00000534716 H7C1W4 665 aa24.12■■□□□ 1.45
NDUFS3-213ENST00000534716 VEGFBP49765 207 aa24.12■■□□□ 1.45
NDUFS3-213ENST00000534716 CWF19L2Q2TBE0 894 aaKnown RBP24.12■■□□□ 1.45
NDUFS3-213ENST00000534716 TTLL11Q8NHH1 800 aa24.12■■□□□ 1.45
NDUFS3-213ENST00000534716 DBNDD1Q9H9R9 158 aa24.12■■□□□ 1.45
NDUFS3-213ENST00000534716 CNOT7Q9UIV1 285 aaKnown RBP24.12■■□□□ 1.45
NDUFS3-213ENST00000534716 PSMD14O00487 310 aa24.11■■□□□ 1.45
NDUFS3-213ENST00000534716 RIMBP2O15034 1052 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms