RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 EPHX2P34913 555 aa27.7■■■□□ 2.02
GSDMD-216ENST00000534602 DPP8Q6V1X1 898 aaPredicted RBP27.7■■■□□ 2.02
GSDMD-216ENST00000534602 NIM1KQ8IY84 436 aa27.7■■■□□ 2.02
GSDMD-216ENST00000534602 TSPYL6Q8N831 410 aa27.7■■■□□ 2.02
GSDMD-216ENST00000534602 JMYQ8N9B5 988 aa27.7■■■□□ 2.02
GSDMD-216ENST00000534602 MPNDQ8N594 471 aa27.69■■■□□ 2.02
GSDMD-216ENST00000534602 ZBTB38Q8NAP3 1195 aaPredicted RBP27.69■■■□□ 2.02
GSDMD-216ENST00000534602 TSR2Q969E8 191 aaKnown RBP27.69■■■□□ 2.02
GSDMD-216ENST00000534602 CCDC191Q8NCU4 936 aa27.68■■■□□ 2.02
GSDMD-216ENST00000534602 ZNF428Q96B54 188 aa27.68■■■□□ 2.02
GSDMD-216ENST00000534602 IRS4O14654 1257 aaPredicted RBP27.67■■■□□ 2.02
GSDMD-216ENST00000534602 AOC3Q16853 763 aa27.66■■■□□ 2.02
GSDMD-216ENST00000534602 MYD88Q99836 296 aa27.66■■■□□ 2.02
GSDMD-216ENST00000534602 METTL22Q9BUU2 404 aaPredicted RBP27.66■■■□□ 2.02
GSDMD-216ENST00000534602 GJA3Q9Y6H8 435 aa27.66■■■□□ 2.02
GSDMD-216ENST00000534602 EAPPQ56P03 285 aaPredicted RBP27.65■■■□□ 2.02
GSDMD-216ENST00000534602 STK31Q9BXU1 1019 aa27.65■■■□□ 2.02
GSDMD-216ENST00000534602 ZNRF3Q9ULT6 936 aa27.65■■■□□ 2.02
GSDMD-216ENST00000534602 ADAMTSL1Q8N6G6 1762 aa27.64■■■□□ 2.02
GSDMD-216ENST00000534602 PCCAP05165 728 aaPredicted RBP27.64■■■□□ 2.02
GSDMD-216ENST00000534602 KIAA2012Q0VF49 1180 aa27.64■■■□□ 2.02
GSDMD-216ENST00000534602 TWISTNBQ3B726 338 aaPredicted RBP27.64■■■□□ 2.02
GSDMD-216ENST00000534602 RTL5Q5HYW3 569 aaPredicted RBP27.64■■■□□ 2.02
GSDMD-216ENST00000534602 CREBZFQ9NS37 354 aa27.64■■■□□ 2.02
GSDMD-216ENST00000534602 CWC25Q9NXE8 425 aaPredicted RBP27.64■■■□□ 2.02
GSDMD-216ENST00000534602 PASKQ96RG2 1323 aa27.64■■■□□ 2.01
GSDMD-216ENST00000534602 LRRC37AA6NMS7 1700 aa27.64■■■□□ 2.01
GSDMD-216ENST00000534602 LMOD1P29536 600 aaPredicted RBP27.63■■■□□ 2.01
GSDMD-216ENST00000534602 KSR2Q6VAB6 950 aa27.63■■■□□ 2.01
GSDMD-216ENST00000534602 WDR63Q8IWG1 891 aa27.63■■■□□ 2.01
GSDMD-216ENST00000534602 CELF1Q92879 486 aaKnown RBP27.63■■■□□ 2.01
GSDMD-216ENST00000534602 TAF1P21675 1872 aa27.63■■■□□ 2.01
GSDMD-216ENST00000534602 ITGBL1O95965 494 aaPredicted RBP27.61■■■□□ 2.01
GSDMD-216ENST00000534602 SCNN1DP51172 638 aa27.61■■■□□ 2.01
GSDMD-216ENST00000534602 CLEC11AQ9Y240 323 aa27.61■■■□□ 2.01
GSDMD-216ENST00000534602 MAP3K2Q9Y2U5 619 aa27.61■■■□□ 2.01
GSDMD-216ENST00000534602 RPS8P62241 208 aaKnown RBP27.6■■■□□ 2.01
GSDMD-216ENST00000534602 PI4KAP2A4QPH2 592 aa27.59■■■□□ 2.01
GSDMD-216ENST00000534602 CXCL9Q07325 125 aa27.59■■■□□ 2.01
GSDMD-216ENST00000534602 PI4KAP1Q8N8J0 262 aa27.59■■■□□ 2.01
GSDMD-216ENST00000534602 DUOX1Q9NRD9 1551 aa27.58■■■□□ 2.01
GSDMD-216ENST00000534602 PDE8AO60658 829 aa27.58■■■□□ 2.01
GSDMD-216ENST00000534602 NSFL1CQ9UNZ2 370 aaKnown RBP27.58■■■□□ 2.01
GSDMD-216ENST00000534602 FANCIQ9NVI1 1328 aa27.58■■■□□ 2.01
GSDMD-216ENST00000534602 SLC4A2P04920 1241 aa27.57■■■□□ 2
GSDMD-216ENST00000534602 EPS15P42566 896 aa27.57■■■□□ 2
GSDMD-216ENST00000534602 NEXNQ0ZGT2 675 aa27.57■■■□□ 2
GSDMD-216ENST00000534602 CCDC152Q4G0S7 254 aa27.57■■■□□ 2
GSDMD-216ENST00000534602 USP50Q70EL3 339 aaPredicted RBP27.57■■■□□ 2
GSDMD-216ENST00000534602 LTBP1Q14766 1721 aa27.57■■■□□ 2
GSDMD-216ENST00000534602 CDHR2Q9BYE9 1310 aa27.57■■■□□ 2
GSDMD-216ENST00000534602 TNIP1Q15025 636 aa27.56■■■□□ 2
GSDMD-216ENST00000534602 CNTROBQ8N137 903 aa27.56■■■□□ 2
GSDMD-216ENST00000534602 GPRC5DQ9NZD1 345 aa27.56■■■□□ 2
GSDMD-216ENST00000534602 IGKV5-2P06315 115 aa27.55■■■□□ 2
GSDMD-216ENST00000534602 CIAPIN1Q6FI81 312 aa27.55■■■□□ 2
GSDMD-216ENST00000534602 WASHC4Q2M389 1173 aa27.54■■■□□ 2
GSDMD-216ENST00000534602 MAP1SQ66K74 1059 aaPredicted RBP27.54■■■□□ 2
GSDMD-216ENST00000534602 TMEM88BA6NKF7 163 aa27.53■■■□□ 2
GSDMD-216ENST00000534602 GPSM2P81274 684 aa27.53■■■□□ 2
GSDMD-216ENST00000534602 G2E3Q7L622 706 aa27.53■■■□□ 2
GSDMD-216ENST00000534602 EYA3Q99504 573 aa27.53■■■□□ 2
GSDMD-216ENST00000534602 SEC31BQ9NQW1 1179 aa27.53■■■□□ 2
GSDMD-216ENST00000534602 ADARB2Q9NS39 739 aaKnown RBP27.53■■■□□ 2
GSDMD-216ENST00000534602 PODXL2Q9NZ53 605 aa27.53■■■□□ 2
GSDMD-216ENST00000534602 COL4A1P02462 1669 aa27.52■■■□□ 2
GSDMD-216ENST00000534602 PCNTO95613 3336 aa27.52■■■□□ 2
GSDMD-216ENST00000534602 POLLQ9UGP5 575 aa27.52■■■□□ 2
GSDMD-216ENST00000534602 SALL2Q9Y467 1007 aaPredicted RBP27.52■■■□□ 2
GSDMD-216ENST00000534602 CACNA1FO60840 1977 aa27.51■■■□□ 2
GSDMD-216ENST00000534602 C6orf229H3BNL8 230 aa27.51■■□□□ 1.99
GSDMD-216ENST00000534602 VAMP4O75379 141 aa27.51■■□□□ 1.99
GSDMD-216ENST00000534602 GMPSP49915 693 aaPredicted RBP27.51■■□□□ 1.99
GSDMD-216ENST00000534602 FLIIQ13045 1269 aa27.51■■□□□ 1.99
GSDMD-216ENST00000534602 YDJCA8MPS7 323 aa27.5■■□□□ 1.99
GSDMD-216ENST00000534602 NEURL1BA8MQ27 555 aa27.5■■□□□ 1.99
GSDMD-216ENST00000534602 RAD17O75943 681 aa27.5■■□□□ 1.99
GSDMD-216ENST00000534602 TBC1D16Q8TBP0 767 aa27.5■■□□□ 1.99
GSDMD-216ENST00000534602 JARID2Q92833 1246 aaPredicted RBP27.5■■□□□ 1.99
GSDMD-216ENST00000534602 FAM9BQ8IZU0 186 aa27.49■■□□□ 1.99
GSDMD-216ENST00000534602 CNTNAP1P78357 1384 aa27.48■■□□□ 1.99
GSDMD-216ENST00000534602 CTSWP56202 376 aa27.48■■□□□ 1.99
GSDMD-216ENST00000534602 EXOSC9Q06265 439 aaKnown RBP27.48■■□□□ 1.99
GSDMD-216ENST00000534602 CWF19L2Q2TBE0 894 aaKnown RBP27.48■■□□□ 1.99
GSDMD-216ENST00000534602 IFFO2Q5TF58 517 aa27.48■■□□□ 1.99
GSDMD-216ENST00000534602 BCL2L13Q9BXK5 485 aa27.48■■□□□ 1.99
GSDMD-216ENST00000534602 MYH16Q9H6N6 1097 aa27.48■■□□□ 1.99
GSDMD-216ENST00000534602 MKRN1Q9UHC7 482 aaKnown RBP27.48■■□□□ 1.99
GSDMD-216ENST00000534602 H7C1W4 665 aa27.47■■□□□ 1.99
GSDMD-216ENST00000534602 ANKRD18AQ8IVF6 992 aa27.47■■□□□ 1.99
GSDMD-216ENST00000534602 RTL9Q8NET4 1388 aa27.47■■□□□ 1.99
GSDMD-216ENST00000534602 RIMBP2O15034 1052 aa27.46■■□□□ 1.99
GSDMD-216ENST00000534602 FKBP5Q13451 457 aaPredicted RBP27.46■■□□□ 1.99
GSDMD-216ENST00000534602 TTLL11Q8NHH1 800 aa27.46■■□□□ 1.99
GSDMD-216ENST00000534602 CDC5LQ99459 802 aaKnown RBP27.46■■□□□ 1.99
GSDMD-216ENST00000534602 ZC3H12CQ9C0D7 883 aaKnown RBP27.46■■□□□ 1.99
GSDMD-216ENST00000534602 ANKIB1Q9P2G1 1089 aa27.46■■□□□ 1.99
GSDMD-216ENST00000534602 DNAAF4Q8WXU2 420 aa27.45■■□□□ 1.98
GSDMD-216ENST00000534602 DPF2Q92785 391 aa27.45■■□□□ 1.98
GSDMD-216ENST00000534602 CCDC85AQ96PX6 553 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms