RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 NFKBIEO00221 500 aa17.77■□□□□ 0.44
VPS11-205ENST00000534551 GRM8O00222 908 aa17.77■□□□□ 0.44
VPS11-205ENST00000534551 PPEF1O14829 653 aaPredicted RBP17.77■□□□□ 0.44
VPS11-205ENST00000534551 GRIN3BO60391 1043 aa17.77■□□□□ 0.44
VPS11-205ENST00000534551 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
VPS11-205ENST00000534551 PRELPP51888 382 aa17.77■□□□□ 0.44
VPS11-205ENST00000534551 CTSWP56202 376 aa17.77■□□□□ 0.44
VPS11-205ENST00000534551 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
VPS11-205ENST00000534551 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
VPS11-205ENST00000534551 PDE8AO60658 829 aa17.76■□□□□ 0.43
VPS11-205ENST00000534551 ALDH1L1O75891 902 aa17.76■□□□□ 0.43
VPS11-205ENST00000534551 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
VPS11-205ENST00000534551 EPHA10Q5JZY3 1008 aa17.76■□□□□ 0.43
VPS11-205ENST00000534551 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
VPS11-205ENST00000534551 CELF1Q92879 486 aaKnown RBP17.76■□□□□ 0.43
VPS11-205ENST00000534551 CLUAP1Q96AJ1 413 aa17.76■□□□□ 0.43
VPS11-205ENST00000534551 NBPF7P0C2Y1 421 aaPredicted RBP17.75■□□□□ 0.43
VPS11-205ENST00000534551 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
VPS11-205ENST00000534551 SUCLG2Q96I99 432 aa17.75■□□□□ 0.43
VPS11-205ENST00000534551 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
VPS11-205ENST00000534551 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
VPS11-205ENST00000534551 GREM2Q9H772 168 aa17.75■□□□□ 0.43
VPS11-205ENST00000534551 COL4A5P29400 1685 aa17.74■□□□□ 0.43
VPS11-205ENST00000534551 GRAPQ13588 217 aa17.74■□□□□ 0.43
VPS11-205ENST00000534551 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
VPS11-205ENST00000534551 GRAPLQ8TC17 118 aaPredicted RBP17.74■□□□□ 0.43
VPS11-205ENST00000534551 ALDH1B1P30837 517 aa17.73■□□□□ 0.43
VPS11-205ENST00000534551 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
VPS11-205ENST00000534551 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
VPS11-205ENST00000534551 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
VPS11-205ENST00000534551 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
VPS11-205ENST00000534551 RLBP1P12271 317 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 FOXO4P98177 505 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 CCDC152Q4G0S7 254 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 RCAN3Q9UKA8 241 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 UTYO14607 1347 aa17.72■□□□□ 0.43
VPS11-205ENST00000534551 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
VPS11-205ENST00000534551 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
VPS11-205ENST00000534551 ARHGAP45Q92619 1136 aa17.71■□□□□ 0.43
VPS11-205ENST00000534551 MEIS3Q99687 375 aa17.71■□□□□ 0.43
VPS11-205ENST00000534551 USP44Q9H0E7 712 aa17.71■□□□□ 0.43
VPS11-205ENST00000534551 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
VPS11-205ENST00000534551 PLIN1O60240 522 aa17.7■□□□□ 0.42
VPS11-205ENST00000534551 CCT4P50991 539 aaKnown RBP17.7■□□□□ 0.42
VPS11-205ENST00000534551 TAOK3Q9H2K8 898 aa17.7■□□□□ 0.42
VPS11-205ENST00000534551 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
VPS11-205ENST00000534551 YY1P25490 414 aa17.69■□□□□ 0.42
VPS11-205ENST00000534551 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
VPS11-205ENST00000534551 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
VPS11-205ENST00000534551 RNF181Q9P0P0 153 aa17.69■□□□□ 0.42
VPS11-205ENST00000534551 ATP6V0A2Q9Y487 856 aa17.69■□□□□ 0.42
VPS11-205ENST00000534551 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
VPS11-205ENST00000534551 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
VPS11-205ENST00000534551 ITGA6P23229 1130 aa17.68■□□□□ 0.42
VPS11-205ENST00000534551 INTS3Q68E01 1043 aaKnown RBP17.68■□□□□ 0.42
VPS11-205ENST00000534551 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
VPS11-205ENST00000534551 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
VPS11-205ENST00000534551 PANK1Q8TE04 598 aa17.68■□□□□ 0.42
VPS11-205ENST00000534551 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
VPS11-205ENST00000534551 CSF1RP07333 972 aa17.67■□□□□ 0.42
VPS11-205ENST00000534551 GPR101Q96P66 508 aaPredicted RBP17.67■□□□□ 0.42
VPS11-205ENST00000534551 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
VPS11-205ENST00000534551 FKBP4Q02790 459 aaKnown RBP eCLIP17.66■□□□□ 0.42
VPS11-205ENST00000534551 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
VPS11-205ENST00000534551 FTSJ3Q8IY81 847 aaKnown RBP17.66■□□□□ 0.42
VPS11-205ENST00000534551 ZNF594Q96JF6 807 aaPredicted RBP17.66■□□□□ 0.42
VPS11-205ENST00000534551 LTBP3Q9NS15 1303 aa17.66■□□□□ 0.42
VPS11-205ENST00000534551 BBOX1O75936 387 aa17.65■□□□□ 0.42
VPS11-205ENST00000534551 LMNB1P20700 586 aa17.65■□□□□ 0.42
VPS11-205ENST00000534551 GPSM2P81274 684 aa17.65■□□□□ 0.42
VPS11-205ENST00000534551 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
VPS11-205ENST00000534551 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
VPS11-205ENST00000534551 LRRFIP2Q9Y608 721 aaKnown RBP17.65■□□□□ 0.42
VPS11-205ENST00000534551 SCN9AQ15858 1988 aa17.64■□□□□ 0.41
VPS11-205ENST00000534551 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.41
VPS11-205ENST00000534551 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
VPS11-205ENST00000534551 ITPRIPQ8IWB1 547 aa17.64■□□□□ 0.41
VPS11-205ENST00000534551 SP8Q8IXZ3 490 aa17.64■□□□□ 0.41
VPS11-205ENST00000534551 ZNF526Q8TF50 670 aaPredicted RBP17.64■□□□□ 0.41
VPS11-205ENST00000534551 CDC5LQ99459 802 aaKnown RBP17.64■□□□□ 0.41
VPS11-205ENST00000534551 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
VPS11-205ENST00000534551 RTKN2Q8IZC4 609 aa17.63■□□□□ 0.41
VPS11-205ENST00000534551 KLHDC4Q8TBB5 520 aa17.63■□□□□ 0.41
VPS11-205ENST00000534551 C1orf115Q9H7X2 142 aa17.63■□□□□ 0.41
VPS11-205ENST00000534551 ZNF646O15015 1829 aaPredicted RBP17.63■□□□□ 0.41
VPS11-205ENST00000534551 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
VPS11-205ENST00000534551 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
VPS11-205ENST00000534551 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
VPS11-205ENST00000534551 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
VPS11-205ENST00000534551 DPP8Q6V1X1 898 aaPredicted RBP17.62■□□□□ 0.41
VPS11-205ENST00000534551 MPNDQ8N594 471 aa17.62■□□□□ 0.41
VPS11-205ENST00000534551 NSFL1CQ9UNZ2 370 aaKnown RBP17.62■□□□□ 0.41
VPS11-205ENST00000534551 PSME4Q14997 1843 aa17.61■□□□□ 0.41
VPS11-205ENST00000534551 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
VPS11-205ENST00000534551 AOC3Q16853 763 aa17.61■□□□□ 0.41
VPS11-205ENST00000534551 PSMD1Q99460 953 aa17.61■□□□□ 0.41
VPS11-205ENST00000534551 UFL1O94874 794 aa17.6■□□□□ 0.41
VPS11-205ENST00000534551 IGHMBP2P38935 993 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms