RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PPEF1O14829 653 aaPredicted RBP27.23■■□□□ 1.95
PKP3-211ENST00000534401 PDE8AO60658 829 aa27.23■■□□□ 1.95
PKP3-211ENST00000534401 CASP7P55210 303 aa27.23■■□□□ 1.95
PKP3-211ENST00000534401 F6X3S4 739 aa27.22■■□□□ 1.95
PKP3-211ENST00000534401 BRPF1P55201 1214 aaPredicted RBP27.22■■□□□ 1.95
PKP3-211ENST00000534401 SP8Q8IXZ3 490 aa27.22■■□□□ 1.95
PKP3-211ENST00000534401 MYH3P11055 1940 aa27.22■■□□□ 1.95
PKP3-211ENST00000534401 TMC4Q7Z404 712 aa27.21■■□□□ 1.95
PKP3-211ENST00000534401 PLA2G12BQ9BX93 195 aa27.21■■□□□ 1.95
PKP3-211ENST00000534401 LRRC37AA6NMS7 1700 aa27.21■■□□□ 1.95
PKP3-211ENST00000534401 TIAM2Q8IVF5 1701 aa27.21■■□□□ 1.95
PKP3-211ENST00000534401 COL4A1P02462 1669 aa27.21■■□□□ 1.95
PKP3-211ENST00000534401 SLC51AQ86UW1 340 aa27.2■■□□□ 1.94
PKP3-211ENST00000534401 JARID2Q92833 1246 aaPredicted RBP27.2■■□□□ 1.94
PKP3-211ENST00000534401 GPBP1L1Q9HC44 474 aaPredicted RBP27.19■■□□□ 1.94
PKP3-211ENST00000534401 PTPRCP08575 1304 aa27.18■■□□□ 1.94
PKP3-211ENST00000534401 HNRNPUQ00839 825 aaKnown RBP eCLIP27.18■■□□□ 1.94
PKP3-211ENST00000534401 RTFDC1Q9BY42 306 aaPredicted RBP27.18■■□□□ 1.94
PKP3-211ENST00000534401 CELF1Q92879 486 aaKnown RBP27.17■■□□□ 1.94
PKP3-211ENST00000534401 RTL9Q8NET4 1388 aa27.17■■□□□ 1.94
PKP3-211ENST00000534401 ALDH1L1O75891 902 aa27.16■■□□□ 1.94
PKP3-211ENST00000534401 UBE3BQ7Z3V4 1068 aa27.16■■□□□ 1.94
PKP3-211ENST00000534401 TTLL11Q8NHH1 800 aa27.16■■□□□ 1.94
PKP3-211ENST00000534401 GLTPD2A6NH11 291 aa27.15■■□□□ 1.94
PKP3-211ENST00000534401 CTSWP56202 376 aa27.15■■□□□ 1.94
PKP3-211ENST00000534401 RPS8P62241 208 aaKnown RBP27.15■■□□□ 1.94
PKP3-211ENST00000534401 CCDC152Q4G0S7 254 aa27.15■■□□□ 1.94
PKP3-211ENST00000534401 VPS33BQ9H267 617 aa27.15■■□□□ 1.94
PKP3-211ENST00000534401 ZNF277Q9NRM2 450 aaPredicted RBP27.15■■□□□ 1.94
PKP3-211ENST00000534401 KIF3CO14782 793 aa27.14■■□□□ 1.94
PKP3-211ENST00000534401 IARSP41252 1262 aaKnown RBP27.14■■□□□ 1.94
PKP3-211ENST00000534401 C1QTNF8P60827 252 aa27.14■■□□□ 1.94
PKP3-211ENST00000534401 SEC31BQ9NQW1 1179 aa27.14■■□□□ 1.94
PKP3-211ENST00000534401 ZBED9Q6R2W3 1325 aa27.14■■□□□ 1.93
PKP3-211ENST00000534401 CSF1RP07333 972 aa27.13■■□□□ 1.93
PKP3-211ENST00000534401 RARSP54136 660 aaKnown RBP27.12■■□□□ 1.93
PKP3-211ENST00000534401 ZNF526Q8TF50 670 aaPredicted RBP27.12■■□□□ 1.93
PKP3-211ENST00000534401 LTBP1Q14766 1721 aa27.12■■□□□ 1.93
PKP3-211ENST00000534401 KDM2BQ8NHM5 1336 aa27.12■■□□□ 1.93
PKP3-211ENST00000534401 COL4A5P29400 1685 aa27.11■■□□□ 1.93
PKP3-211ENST00000534401 SRCIN1Q9C0H9 1055 aa27.11■■□□□ 1.93
PKP3-211ENST00000534401 UTYO14607 1347 aa27.11■■□□□ 1.93
PKP3-211ENST00000534401 DUOX1Q9NRD9 1551 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 FZD9O00144 591 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 MPNDQ8N594 471 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 BCL2L13Q9BXK5 485 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 TMX4Q9H1E5 349 aaPredicted RBP27.1■■□□□ 1.93
PKP3-211ENST00000534401 NMRK2Q9NPI5 230 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 SMC4Q9NTJ3 1288 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
PKP3-211ENST00000534401 GRM8O00222 908 aa27.09■■□□□ 1.93
PKP3-211ENST00000534401 FOXO4P98177 505 aa27.08■■□□□ 1.93
PKP3-211ENST00000534401 SUPT20HQ8NEM7 779 aa27.08■■□□□ 1.93
PKP3-211ENST00000534401 DPY19L2Q6NUT2 758 aa27.07■■□□□ 1.92
PKP3-211ENST00000534401 SLC4A10Q6U841 1118 aa27.07■■□□□ 1.92
PKP3-211ENST00000534401 DPP8Q6V1X1 898 aaPredicted RBP27.07■■□□□ 1.92
PKP3-211ENST00000534401 GREM2Q9H772 168 aa27.07■■□□□ 1.92
PKP3-211ENST00000534401 PODXL2Q9NZ53 605 aa27.07■■□□□ 1.92
PKP3-211ENST00000534401 POTECB2RU33 542 aa27.06■■□□□ 1.92
PKP3-211ENST00000534401 ARHGAP45Q92619 1136 aa27.05■■□□□ 1.92
PKP3-211ENST00000534401 CDC5LQ99459 802 aaKnown RBP27.05■■□□□ 1.92
PKP3-211ENST00000534401 KIAA2012Q0VF49 1180 aa27.04■■□□□ 1.92
PKP3-211ENST00000534401 ANKRD18AQ8IVF6 992 aa27.04■■□□□ 1.92
PKP3-211ENST00000534401 CCDC85AQ96PX6 553 aaPredicted RBP27.04■■□□□ 1.92
PKP3-211ENST00000534401 BSDC1Q9NW68 430 aaPredicted RBP27.04■■□□□ 1.92
PKP3-211ENST00000534401 GPSM2P81274 684 aa27.03■■□□□ 1.92
PKP3-211ENST00000534401 EPHA10Q5JZY3 1008 aa27.03■■□□□ 1.92
PKP3-211ENST00000534401 KAZALD1Q96I82 304 aa27.03■■□□□ 1.92
PKP3-211ENST00000534401 L3MBTL3Q96JM7 780 aaPredicted RBP27.03■■□□□ 1.92
PKP3-211ENST00000534401 RRAGCQ9HB90 399 aa27.03■■□□□ 1.92
PKP3-211ENST00000534401 NOB1Q9ULX3 412 aaKnown RBP27.03■■□□□ 1.92
PKP3-211ENST00000534401 LARGE2Q8N3Y3 721 aa27.02■■□□□ 1.92
PKP3-211ENST00000534401 JDP2Q8WYK2 163 aa27.02■■□□□ 1.92
PKP3-211ENST00000534401 C9orf78Q9NZ63 289 aaPredicted RBP27.02■■□□□ 1.92
PKP3-211ENST00000534401 POLLQ9UGP5 575 aa27.02■■□□□ 1.92
PKP3-211ENST00000534401 ZNF541Q9H0D2 1346 aa27.01■■□□□ 1.91
PKP3-211ENST00000534401 DDNO94850 711 aaPredicted RBP27.01■■□□□ 1.91
PKP3-211ENST00000534401 USP44Q9H0E7 712 aa27.01■■□□□ 1.91
PKP3-211ENST00000534401 NSFL1CQ9UNZ2 370 aaKnown RBP27.01■■□□□ 1.91
PKP3-211ENST00000534401 KIF16BQ96L93 1317 aa27■■□□□ 1.91
PKP3-211ENST00000534401 PPIP5K2O43314 1243 aa27■■□□□ 1.91
PKP3-211ENST00000534401 NBPF7P0C2Y1 421 aaPredicted RBP27■■□□□ 1.91
PKP3-211ENST00000534401 VEGFAP15692 232 aaPredicted RBP27■■□□□ 1.91
PKP3-211ENST00000534401 ITGA6P23229 1130 aa27■■□□□ 1.91
PKP3-211ENST00000534401 AOC3Q16853 763 aa27■■□□□ 1.91
PKP3-211ENST00000534401 FAM161AQ3B820 660 aa27■■□□□ 1.91
PKP3-211ENST00000534401 API5Q9BZZ5 524 aaKnown RBP27■■□□□ 1.91
PKP3-211ENST00000534401 TBC1D16Q8TBP0 767 aa26.99■■□□□ 1.91
PKP3-211ENST00000534401 SCN4AP35499 1836 aa26.99■■□□□ 1.91
PKP3-211ENST00000534401 SPEF2Q9C093 1822 aa26.98■■□□□ 1.91
PKP3-211ENST00000534401 TOMM70O94826 608 aa26.98■■□□□ 1.91
PKP3-211ENST00000534401 SUCLG2Q96I99 432 aa26.98■■□□□ 1.91
PKP3-211ENST00000534401 MINPP1Q9UNW1 487 aa26.98■■□□□ 1.91
PKP3-211ENST00000534401 CCT4P50991 539 aaKnown RBP26.97■■□□□ 1.91
PKP3-211ENST00000534401 RABL6Q3YEC7 729 aaPredicted RBP26.97■■□□□ 1.91
PKP3-211ENST00000534401 LMBR1LQ6UX01 489 aa26.97■■□□□ 1.91
PKP3-211ENST00000534401 NIM1KQ8IY84 436 aa26.97■■□□□ 1.91
PKP3-211ENST00000534401 GPC2Q8N158 579 aa26.97■■□□□ 1.91
PKP3-211ENST00000534401 ZNRF3Q9ULT6 936 aa26.96■■□□□ 1.91
PKP3-211ENST00000534401 XDHP47989 1333 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms