RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-215ENST00000534307 ZNF541Q9H0D2 1346 aa18.13■□□□□ 0.49
SF3B2-215ENST00000534307 COL4A1P02462 1669 aa18.12■□□□□ 0.49
SF3B2-215ENST00000534307 BBOX1O75936 387 aa18.12■□□□□ 0.49
SF3B2-215ENST00000534307 CTCFP49711 727 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-215ENST00000534307 TCERG1O14776 1098 aaKnown RBP18.11■□□□□ 0.49
SF3B2-215ENST00000534307 VEGFBP49765 207 aa18.11■□□□□ 0.49
SF3B2-215ENST00000534307 GRAPQ13588 217 aa18.11■□□□□ 0.49
SF3B2-215ENST00000534307 SF3B3Q15393 1217 aaKnown RBP18.11■□□□□ 0.49
SF3B2-215ENST00000534307 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
SF3B2-215ENST00000534307 METTL22Q9BUU2 404 aaPredicted RBP18.11■□□□□ 0.49
SF3B2-215ENST00000534307 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
SF3B2-215ENST00000534307 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
SF3B2-215ENST00000534307 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
SF3B2-215ENST00000534307 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
SF3B2-215ENST00000534307 ZBTB38Q8NAP3 1195 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-215ENST00000534307 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
SF3B2-215ENST00000534307 MYD88Q99836 296 aa18.1■□□□□ 0.49
SF3B2-215ENST00000534307 RTFDC1Q9BY42 306 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-215ENST00000534307 SALL2Q9Y467 1007 aaPredicted RBP18.1■□□□□ 0.49
SF3B2-215ENST00000534307 DUOX1Q9NRD9 1551 aa18.09■□□□□ 0.49
SF3B2-215ENST00000534307 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
SF3B2-215ENST00000534307 AIDAQ96BJ3 306 aa18.09■□□□□ 0.49
SF3B2-215ENST00000534307 SPINK5Q9NQ38 1064 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-215ENST00000534307 WBP1LQ9NX94 342 aa18.09■□□□□ 0.49
SF3B2-215ENST00000534307 CACNA1FO60840 1977 aa18.08■□□□□ 0.49
SF3B2-215ENST00000534307 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.48
SF3B2-215ENST00000534307 LBX1P52954 281 aa18.08■□□□□ 0.48
SF3B2-215ENST00000534307 RTL5Q5HYW3 569 aaPredicted RBP18.08■□□□□ 0.48
SF3B2-215ENST00000534307 KSR2Q6VAB6 950 aa18.08■□□□□ 0.48
SF3B2-215ENST00000534307 G2E3Q7L622 706 aa18.08■□□□□ 0.48
SF3B2-215ENST00000534307 LDHDQ86WU2 507 aa18.08■□□□□ 0.48
SF3B2-215ENST00000534307 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
SF3B2-215ENST00000534307 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
SF3B2-215ENST00000534307 LTBP1Q14766 1721 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 VAMP4O75379 141 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 PCCAP05165 728 aaPredicted RBP18.07■□□□□ 0.48
SF3B2-215ENST00000534307 IGKV5-2P06315 115 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 TMC4Q7Z404 712 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 JDP2Q8WYK2 163 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 VPS33BQ9H267 617 aa18.07■□□□□ 0.48
SF3B2-215ENST00000534307 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
SF3B2-215ENST00000534307 TRPM7Q96QT4 1865 aa18.06■□□□□ 0.48
SF3B2-215ENST00000534307 IQCA1LA6NCM1 817 aa18.06■□□□□ 0.48
SF3B2-215ENST00000534307 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
SF3B2-215ENST00000534307 GPC2Q8N158 579 aa18.06■□□□□ 0.48
SF3B2-215ENST00000534307 LARGE2Q8N3Y3 721 aa18.06■□□□□ 0.48
SF3B2-215ENST00000534307 CELF1Q92879 486 aaKnown RBP18.06■□□□□ 0.48
SF3B2-215ENST00000534307 ABHD8Q96I13 439 aa18.06■□□□□ 0.48
SF3B2-215ENST00000534307 TAF1DQ9H5J8 278 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-215ENST00000534307 PDE4DIPQ5VU43 2346 aa18.05■□□□□ 0.48
SF3B2-215ENST00000534307 TMEM88BA6NKF7 163 aa18.05■□□□□ 0.48
SF3B2-215ENST00000534307 ITGBL1O95965 494 aaPredicted RBP18.05■□□□□ 0.48
SF3B2-215ENST00000534307 HSPA8P11142 646 aaKnown RBP18.05■□□□□ 0.48
SF3B2-215ENST00000534307 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
SF3B2-215ENST00000534307 TMX4Q9H1E5 349 aaPredicted RBP18.05■□□□□ 0.48
SF3B2-215ENST00000534307 PPIP5K2O43314 1243 aa18.04■□□□□ 0.48
SF3B2-215ENST00000534307 FLIIQ13045 1269 aa18.04■□□□□ 0.48
SF3B2-215ENST00000534307 AOC3Q16853 763 aa18.04■□□□□ 0.48
SF3B2-215ENST00000534307 DPP8Q6V1X1 898 aaPredicted RBP18.04■□□□□ 0.48
SF3B2-215ENST00000534307 MPNDQ8N594 471 aa18.04■□□□□ 0.48
SF3B2-215ENST00000534307 SUPT20HQ8NEM7 779 aa18.04■□□□□ 0.48
SF3B2-215ENST00000534307 CDHR2Q9BYE9 1310 aa18.03■□□□□ 0.48
SF3B2-215ENST00000534307 KIAA2012Q0VF49 1180 aa18.03■□□□□ 0.48
SF3B2-215ENST00000534307 RASSF10A6NK89 507 aa18.02■□□□□ 0.48
SF3B2-215ENST00000534307 NEURL1BA8MQ27 555 aa18.02■□□□□ 0.48
SF3B2-215ENST00000534307 PDE8AO60658 829 aa18.02■□□□□ 0.48
SF3B2-215ENST00000534307 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.48
SF3B2-215ENST00000534307 EIF6P56537 245 aaKnown RBP18.02■□□□□ 0.48
SF3B2-215ENST00000534307 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
SF3B2-215ENST00000534307 NIM1KQ8IY84 436 aa18.02■□□□□ 0.48
SF3B2-215ENST00000534307 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
SF3B2-215ENST00000534307 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
SF3B2-215ENST00000534307 HACL1Q9UJ83 578 aa18.02■□□□□ 0.48
SF3B2-215ENST00000534307 EPHX2P34913 555 aa18.01■□□□□ 0.47
SF3B2-215ENST00000534307 RPS8P62241 208 aaKnown RBP18.01■□□□□ 0.47
SF3B2-215ENST00000534307 SEC31BQ9NQW1 1179 aa18.01■□□□□ 0.47
SF3B2-215ENST00000534307 MYH3P11055 1940 aa18.01■□□□□ 0.47
SF3B2-215ENST00000534307 SCNN1DP51172 638 aa18■□□□□ 0.47
SF3B2-215ENST00000534307 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
SF3B2-215ENST00000534307 CCDC152Q4G0S7 254 aa18■□□□□ 0.47
SF3B2-215ENST00000534307 ZNRF3Q9ULT6 936 aa18■□□□□ 0.47
SF3B2-215ENST00000534307 H7C1W4 665 aa17.99■□□□□ 0.47
SF3B2-215ENST00000534307 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
SF3B2-215ENST00000534307 GJA3Q9Y6H8 435 aa17.99■□□□□ 0.47
SF3B2-215ENST00000534307 CASP8AP2Q9UKL3 1982 aa17.99■□□□□ 0.47
SF3B2-215ENST00000534307 CTSWP56202 376 aa17.98■□□□□ 0.47
SF3B2-215ENST00000534307 GPSM2P81274 684 aa17.98■□□□□ 0.47
SF3B2-215ENST00000534307 CXCL9Q07325 125 aa17.98■□□□□ 0.47
SF3B2-215ENST00000534307 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
SF3B2-215ENST00000534307 DNAAF4Q8WXU2 420 aa17.98■□□□□ 0.47
SF3B2-215ENST00000534307 POLLQ9UGP5 575 aa17.98■□□□□ 0.47
SF3B2-215ENST00000534307 RTL9Q8NET4 1388 aa17.98■□□□□ 0.47
SF3B2-215ENST00000534307 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
SF3B2-215ENST00000534307 YDJCA8MPS7 323 aa17.97■□□□□ 0.47
SF3B2-215ENST00000534307 CASP7P55210 303 aa17.97■□□□□ 0.47
SF3B2-215ENST00000534307 GCKRQ14397 625 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms