RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 WDR90Q96KV7 1748 aa19.72■□□□□ 0.75
UBXN1-217ENST00000534176 RRAGCQ9HB90 399 aa19.72■□□□□ 0.75
UBXN1-217ENST00000534176 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
UBXN1-217ENST00000534176 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
UBXN1-217ENST00000534176 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
UBXN1-217ENST00000534176 DNAAF4Q8WXU2 420 aa19.71■□□□□ 0.75
UBXN1-217ENST00000534176 RTFDC1Q9BY42 306 aaPredicted RBP19.71■□□□□ 0.75
UBXN1-217ENST00000534176 FZD9O00144 591 aa19.7■□□□□ 0.74
UBXN1-217ENST00000534176 EIF6P56537 245 aaKnown RBP19.7■□□□□ 0.74
UBXN1-217ENST00000534176 DPP8Q6V1X1 898 aaPredicted RBP19.7■□□□□ 0.74
UBXN1-217ENST00000534176 MPNDQ8N594 471 aa19.7■□□□□ 0.74
UBXN1-217ENST00000534176 SMC1BQ8NDV3 1235 aa19.7■□□□□ 0.74
UBXN1-217ENST00000534176 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
UBXN1-217ENST00000534176 L3MBTL3Q96JM7 780 aaPredicted RBP19.7■□□□□ 0.74
UBXN1-217ENST00000534176 NEURL1BA8MQ27 555 aa19.69■□□□□ 0.74
UBXN1-217ENST00000534176 CT47B1P0C2W7 299 aaPredicted RBP19.69■□□□□ 0.74
UBXN1-217ENST00000534176 HSPA6P17066 643 aa19.69■□□□□ 0.74
UBXN1-217ENST00000534176 LARGE2Q8N3Y3 721 aa19.69■□□□□ 0.74
UBXN1-217ENST00000534176 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
UBXN1-217ENST00000534176 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
UBXN1-217ENST00000534176 OLFM4Q6UX06 510 aa19.68■□□□□ 0.74
UBXN1-217ENST00000534176 GPC2Q8N158 579 aa19.68■□□□□ 0.74
UBXN1-217ENST00000534176 RPS8P62241 208 aaKnown RBP19.67■□□□□ 0.74
UBXN1-217ENST00000534176 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
UBXN1-217ENST00000534176 NIM1KQ8IY84 436 aa19.67■□□□□ 0.74
UBXN1-217ENST00000534176 CDC5LQ99459 802 aaKnown RBP19.67■□□□□ 0.74
UBXN1-217ENST00000534176 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
UBXN1-217ENST00000534176 PPIP5K2O43314 1243 aa19.66■□□□□ 0.74
UBXN1-217ENST00000534176 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
UBXN1-217ENST00000534176 G2E3Q7L622 706 aa19.66■□□□□ 0.74
UBXN1-217ENST00000534176 SCN4AP35499 1836 aa19.66■□□□□ 0.74
UBXN1-217ENST00000534176 RTL9Q8NET4 1388 aa19.66■□□□□ 0.74
UBXN1-217ENST00000534176 LRRC37AA6NMS7 1700 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 APLP1P51693 650 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 CTSWP56202 376 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 SLFN5Q08AF3 891 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 GCKRQ14397 625 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 EYA3Q99504 573 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 PLA2G12BQ9BX93 195 aa19.65■□□□□ 0.74
UBXN1-217ENST00000534176 H7C1W4 665 aa19.64■□□□□ 0.73
UBXN1-217ENST00000534176 DDNO94850 711 aaPredicted RBP19.64■□□□□ 0.73
UBXN1-217ENST00000534176 KIAA2012Q0VF49 1180 aa19.64■□□□□ 0.73
UBXN1-217ENST00000534176 PNMA8AQ86V59 439 aaPredicted RBP19.64■□□□□ 0.73
UBXN1-217ENST00000534176 PTPRCP08575 1304 aa19.64■□□□□ 0.73
UBXN1-217ENST00000534176 CWF19L2Q2TBE0 894 aaKnown RBP19.63■□□□□ 0.73
UBXN1-217ENST00000534176 ALDH1L2Q3SY69 923 aa19.63■□□□□ 0.73
UBXN1-217ENST00000534176 ANKRD18AQ8IVF6 992 aa19.63■□□□□ 0.73
UBXN1-217ENST00000534176 CELF1Q92879 486 aaKnown RBP19.63■□□□□ 0.73
UBXN1-217ENST00000534176 PODXL2Q9NZ53 605 aa19.63■□□□□ 0.73
UBXN1-217ENST00000534176 LMOD1P29536 600 aaPredicted RBP19.62■□□□□ 0.73
UBXN1-217ENST00000534176 HACL1Q9UJ83 578 aa19.62■□□□□ 0.73
UBXN1-217ENST00000534176 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
UBXN1-217ENST00000534176 NSFL1CQ9UNZ2 370 aaKnown RBP19.62■□□□□ 0.73
UBXN1-217ENST00000534176 MYH3P11055 1940 aa19.61■□□□□ 0.73
UBXN1-217ENST00000534176 ALDH1L1O75891 902 aa19.61■□□□□ 0.73
UBXN1-217ENST00000534176 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
UBXN1-217ENST00000534176 ZNF541Q9H0D2 1346 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 POTECB2RU33 542 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 TNIP1Q15025 636 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 AOC3Q16853 763 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 WASHC4Q2M389 1173 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 BEND3Q5T5X7 828 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 TRMT2AQ8IZ69 625 aaKnown RBP19.6■□□□□ 0.73
UBXN1-217ENST00000534176 TTLL11Q8NHH1 800 aa19.6■□□□□ 0.73
UBXN1-217ENST00000534176 LDHDQ86WU2 507 aa19.59■□□□□ 0.73
UBXN1-217ENST00000534176 SRCIN1Q9C0H9 1055 aa19.59■□□□□ 0.73
UBXN1-217ENST00000534176 BSDC1Q9NW68 430 aaPredicted RBP19.59■□□□□ 0.73
UBXN1-217ENST00000534176 ANKIB1Q9P2G1 1089 aa19.59■□□□□ 0.73
UBXN1-217ENST00000534176 XDHP47989 1333 aa19.58■□□□□ 0.73
UBXN1-217ENST00000534176 IGHMBP2P38935 993 aaKnown RBP19.58■□□□□ 0.72
UBXN1-217ENST00000534176 TAF1DQ9H5J8 278 aaPredicted RBP19.58■□□□□ 0.72
UBXN1-217ENST00000534176 C6orf229H3BNL8 230 aa19.57■□□□□ 0.72
UBXN1-217ENST00000534176 EPHX2P34913 555 aa19.57■□□□□ 0.72
UBXN1-217ENST00000534176 CHADLQ6NUI6 762 aa19.57■□□□□ 0.72
UBXN1-217ENST00000534176 ZC3H12CQ9C0D7 883 aaKnown RBP19.57■□□□□ 0.72
UBXN1-217ENST00000534176 SEC31BQ9NQW1 1179 aa19.57■□□□□ 0.72
UBXN1-217ENST00000534176 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
UBXN1-217ENST00000534176 GGA1Q9UJY5 639 aa19.57■□□□□ 0.72
UBXN1-217ENST00000534176 GRM8O00222 908 aa19.56■□□□□ 0.72
UBXN1-217ENST00000534176 CSF1RP07333 972 aa19.56■□□□□ 0.72
UBXN1-217ENST00000534176 ATP2B4P23634 1241 aa19.56■□□□□ 0.72
UBXN1-217ENST00000534176 CASP7P55210 303 aa19.56■□□□□ 0.72
UBXN1-217ENST00000534176 CIAPIN1Q6FI81 312 aa19.56■□□□□ 0.72
UBXN1-217ENST00000534176 MRPL50Q8N5N7 158 aaKnown RBP19.56■□□□□ 0.72
UBXN1-217ENST00000534176 GJA3Q9Y6H8 435 aa19.56■□□□□ 0.72
UBXN1-217ENST00000534176 GPSM2P81274 684 aa19.55■□□□□ 0.72
UBXN1-217ENST00000534176 TBC1D16Q8TBP0 767 aa19.55■□□□□ 0.72
UBXN1-217ENST00000534176 MPHOSPH8Q99549 860 aa19.55■□□□□ 0.72
UBXN1-217ENST00000534176 TAF1P21675 1872 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 DUOX1Q9NRD9 1551 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 F6X3S4 739 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 G3V3G9 751 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 BRPF1P55201 1214 aaPredicted RBP19.54■□□□□ 0.72
UBXN1-217ENST00000534176 DCAF8Q5TAQ9 597 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 SLC4A10Q6U841 1118 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 USP50Q70EL3 339 aaPredicted RBP19.54■□□□□ 0.72
UBXN1-217ENST00000534176 ANKRD2Q9GZV1 360 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 GREM2Q9H772 168 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 LTBP1Q14766 1721 aa19.54■□□□□ 0.72
UBXN1-217ENST00000534176 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms