RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
CLP1-206ENST00000533905 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
CLP1-206ENST00000533905 TRMT112Q9UI30 125 aaKnown RBP13.44□□□□□ -0.26
CLP1-206ENST00000533905 ZBTB12Q9Y330 459 aaPredicted RBP13.44□□□□□ -0.26
CLP1-206ENST00000533905 AOC2O75106 756 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
CLP1-206ENST00000533905 CYP4F22Q6NT55 531 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 NIM1KQ8IY84 436 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
CLP1-206ENST00000533905 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
CLP1-206ENST00000533905 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
CLP1-206ENST00000533905 HSPA8P11142 646 aaKnown RBP13.42□□□□□ -0.26
CLP1-206ENST00000533905 LBX1P52954 281 aa13.42□□□□□ -0.26
CLP1-206ENST00000533905 GRAPQ13588 217 aa13.42□□□□□ -0.26
CLP1-206ENST00000533905 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
CLP1-206ENST00000533905 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
CLP1-206ENST00000533905 ZIC5Q96T25 663 aa13.42□□□□□ -0.26
CLP1-206ENST00000533905 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
CLP1-206ENST00000533905 ASTN2O75129 1339 aaPredicted RBP13.41□□□□□ -0.26
CLP1-206ENST00000533905 SH3TC1Q8TE82 1336 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
CLP1-206ENST00000533905 APAF1O14727 1248 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
CLP1-206ENST00000533905 GPSM2P81274 684 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 KIAA2012Q0VF49 1180 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 GRM1Q13255 1194 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 CC2D2BQ6DHV5 1058 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
CLP1-206ENST00000533905 PNMA8AQ86V59 439 aaPredicted RBP13.41□□□□□ -0.26
CLP1-206ENST00000533905 C8orf58Q8NAV2 365 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
CLP1-206ENST00000533905 BABAM1Q9NWV8 329 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
CLP1-206ENST00000533905 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
CLP1-206ENST00000533905 TSPYL6Q8N831 410 aa13.4□□□□□ -0.26
CLP1-206ENST00000533905 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
CLP1-206ENST00000533905 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
CLP1-206ENST00000533905 ZNRF3Q9ULT6 936 aa13.4□□□□□ -0.26
CLP1-206ENST00000533905 ABT1Q9ULW3 272 aaKnown RBP13.4□□□□□ -0.26
CLP1-206ENST00000533905 SCN9AQ15858 1988 aa13.4□□□□□ -0.27
CLP1-206ENST00000533905 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
CLP1-206ENST00000533905 LMOD3Q0VAK6 560 aa13.39□□□□□ -0.27
CLP1-206ENST00000533905 DOK7Q18PE1 504 aa13.39□□□□□ -0.27
CLP1-206ENST00000533905 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
CLP1-206ENST00000533905 MPNDQ8N594 471 aa13.39□□□□□ -0.27
CLP1-206ENST00000533905 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
CLP1-206ENST00000533905 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
CLP1-206ENST00000533905 PSMD14O00487 310 aa13.38□□□□□ -0.27
CLP1-206ENST00000533905 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
CLP1-206ENST00000533905 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLP1-206ENST00000533905 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
CLP1-206ENST00000533905 USP50Q70EL3 339 aaPredicted RBP13.38□□□□□ -0.27
CLP1-206ENST00000533905 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
CLP1-206ENST00000533905 CAPNS2Q96L46 248 aa13.38□□□□□ -0.27
CLP1-206ENST00000533905 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
CLP1-206ENST00000533905 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
CLP1-206ENST00000533905 HTTP42858 3142 aa13.38□□□□□ -0.27
CLP1-206ENST00000533905 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
CLP1-206ENST00000533905 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
CLP1-206ENST00000533905 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
CLP1-206ENST00000533905 MYD88Q99836 296 aa13.37□□□□□ -0.27
CLP1-206ENST00000533905 SCAF8Q9UPN6 1271 aaKnown RBP13.37□□□□□ -0.27
CLP1-206ENST00000533905 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
CLP1-206ENST00000533905 ADM5C9JUS6 153 aa13.36□□□□□ -0.27
CLP1-206ENST00000533905 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
CLP1-206ENST00000533905 BBOX1O75936 387 aa13.36□□□□□ -0.27
CLP1-206ENST00000533905 SF3B3Q15393 1217 aaKnown RBP13.36□□□□□ -0.27
CLP1-206ENST00000533905 TBC1D10BQ4KMP7 808 aaPredicted RBP13.36□□□□□ -0.27
CLP1-206ENST00000533905 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
CLP1-206ENST00000533905 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
CLP1-206ENST00000533905 ZNF408Q9H9D4 720 aa13.36□□□□□ -0.27
CLP1-206ENST00000533905 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
CLP1-206ENST00000533905 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
CLP1-206ENST00000533905 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
CLP1-206ENST00000533905 CELF2O95319 508 aaKnown RBP13.35□□□□□ -0.27
CLP1-206ENST00000533905 IGKV5-2P06315 115 aa13.35□□□□□ -0.27
CLP1-206ENST00000533905 CTCFP49711 727 aaPredicted RBP13.35□□□□□ -0.27
CLP1-206ENST00000533905 DIEXFQ68CQ4 756 aaKnown RBP13.35□□□□□ -0.27
CLP1-206ENST00000533905 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
CLP1-206ENST00000533905 G2E3Q7L622 706 aa13.35□□□□□ -0.27
CLP1-206ENST00000533905 SAPCD2Q86UD0 394 aa13.35□□□□□ -0.27
CLP1-206ENST00000533905 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
CLP1-206ENST00000533905 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
CLP1-206ENST00000533905 CNOT7Q9UIV1 285 aaKnown RBP13.35□□□□□ -0.27
CLP1-206ENST00000533905 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
CLP1-206ENST00000533905 ECE2O60344 883 aa13.34□□□□□ -0.27
CLP1-206ENST00000533905 HOXB7P09629 217 aa13.34□□□□□ -0.27
CLP1-206ENST00000533905 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
CLP1-206ENST00000533905 PRDM10Q9NQV6 1147 aa13.34□□□□□ -0.27
CLP1-206ENST00000533905 BRCA2P51587 3418 aa13.34□□□□□ -0.27
CLP1-206ENST00000533905 MXD3Q9BW11 206 aa13.33□□□□□ -0.28
CLP1-206ENST00000533905 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
CLP1-206ENST00000533905 CENPFP49454 3210 aa13.33□□□□□ -0.28
CLP1-206ENST00000533905 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
CLP1-206ENST00000533905 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms