RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 FOXO4P98177 505 aa20.7■□□□□ 0.9
PACSIN3-210ENST00000533686 DDX46Q7L014 1031 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-210ENST00000533686 PANK1Q8TE04 598 aa20.7■□□□□ 0.9
PACSIN3-210ENST00000533686 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
PACSIN3-210ENST00000533686 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
PACSIN3-210ENST00000533686 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-210ENST00000533686 SUCLG2Q96I99 432 aa20.69■□□□□ 0.9
PACSIN3-210ENST00000533686 RTL9Q8NET4 1388 aa20.69■□□□□ 0.9
PACSIN3-210ENST00000533686 UBTFL1P0CB47 393 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-210ENST00000533686 ITPRIPQ8IWB1 547 aa20.68■□□□□ 0.9
PACSIN3-210ENST00000533686 KAZALD1Q96I82 304 aa20.68■□□□□ 0.9
PACSIN3-210ENST00000533686 MEIS3Q99687 375 aa20.68■□□□□ 0.9
PACSIN3-210ENST00000533686 BCS1LQ9Y276 419 aa20.68■□□□□ 0.9
PACSIN3-210ENST00000533686 BBOX1O75936 387 aa20.67■□□□□ 0.9
PACSIN3-210ENST00000533686 GRAPQ13588 217 aa20.67■□□□□ 0.9
PACSIN3-210ENST00000533686 EPHA10Q5JZY3 1008 aa20.67■□□□□ 0.9
PACSIN3-210ENST00000533686 PRPF40BQ6NWY9 871 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-210ENST00000533686 GRAPLQ8TC17 118 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-210ENST00000533686 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-210ENST00000533686 ZBTB7BO15156 539 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-210ENST00000533686 MVPQ14764 893 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-210ENST00000533686 GPR162Q16538 588 aa20.66■□□□□ 0.9
PACSIN3-210ENST00000533686 RABL6Q3YEC7 729 aaPredicted RBP20.66■□□□□ 0.9
PACSIN3-210ENST00000533686 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 YBX3P16989 372 aaKnown RBP eCLIP20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 C7orf43Q8WVR3 580 aa20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 BICC1Q9H694 974 aaKnown RBP20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 GREM2Q9H772 168 aa20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
PACSIN3-210ENST00000533686 GRIN3BO60391 1043 aa20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 TMC4Q7Z404 712 aa20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 ANKRD44Q8N8A2 993 aa20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 CCDC85AQ96PX6 553 aaPredicted RBP20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 SEC31BQ9NQW1 1179 aa20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 DDX19BQ9UMR2 479 aa20.64■□□□□ 0.89
PACSIN3-210ENST00000533686 GNAI2P04899 355 aa20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 RPS8P62241 208 aaKnown RBP20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 SOGA3Q5TF21 947 aa20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 CELF1Q92879 486 aaKnown RBP20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
PACSIN3-210ENST00000533686 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
PACSIN3-210ENST00000533686 ITGA6P23229 1130 aa20.62■□□□□ 0.89
PACSIN3-210ENST00000533686 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
PACSIN3-210ENST00000533686 FAM161AQ3B820 660 aa20.62■□□□□ 0.89
PACSIN3-210ENST00000533686 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
PACSIN3-210ENST00000533686 MYH3P11055 1940 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 ANKRD18BA2A2Z9 1011 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 C21orf2O43822 256 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 ATP6V0A2Q9Y487 856 aa20.61■□□□□ 0.89
PACSIN3-210ENST00000533686 SLX4Q8IY92 1834 aa20.6■□□□□ 0.89
PACSIN3-210ENST00000533686 CCDC57Q2TAC2 916 aa20.6■□□□□ 0.89
PACSIN3-210ENST00000533686 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
PACSIN3-210ENST00000533686 SUPT16HQ9Y5B9 1047 aaKnown RBP20.6■□□□□ 0.89
PACSIN3-210ENST00000533686 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
PACSIN3-210ENST00000533686 BSDC1Q9NW68 430 aaPredicted RBP20.59■□□□□ 0.89
PACSIN3-210ENST00000533686 ARFGEF1Q9Y6D6 1849 aa20.58■□□□□ 0.89
PACSIN3-210ENST00000533686 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
PACSIN3-210ENST00000533686 MTX1Q13505 466 aa20.58■□□□□ 0.89
PACSIN3-210ENST00000533686 CCDC93Q567U6 631 aa20.58■□□□□ 0.89
PACSIN3-210ENST00000533686 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
PACSIN3-210ENST00000533686 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
PACSIN3-210ENST00000533686 ZBTB40Q9NUA8 1239 aa20.57■□□□□ 0.88
PACSIN3-210ENST00000533686 ARHGAP27Q6ZUM4 889 aa20.56■□□□□ 0.88
PACSIN3-210ENST00000533686 SNED1Q8TER0 1413 aa20.55■□□□□ 0.88
PACSIN3-210ENST00000533686 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
PACSIN3-210ENST00000533686 TAF7LQ5H9L4 462 aa20.55■□□□□ 0.88
PACSIN3-210ENST00000533686 OLFM4Q6UX06 510 aa20.55■□□□□ 0.88
PACSIN3-210ENST00000533686 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
PACSIN3-210ENST00000533686 COL4A1P02462 1669 aa20.54■□□□□ 0.88
PACSIN3-210ENST00000533686 LTBP3Q9NS15 1303 aa20.54■□□□□ 0.88
PACSIN3-210ENST00000533686 PSMD1Q99460 953 aa20.54■□□□□ 0.88
PACSIN3-210ENST00000533686 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 NFKBIEO00221 500 aa20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 ATP8B2P98198 1209 aa20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 LDHAL6AQ6ZMR3 332 aa20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 MPNDQ8N594 471 aa20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 ZNF594Q96JF6 807 aaPredicted RBP20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 MINPP1Q9UNW1 487 aa20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 TAF1P21675 1872 aa20.53■□□□□ 0.88
PACSIN3-210ENST00000533686 CACNA1SQ13698 1873 aa20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 SRGAP3O43295 1099 aa20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 FKBP4Q02790 459 aaKnown RBP eCLIP20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 PTPN12Q05209 780 aaKnown RBP20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 SLC51AQ86UW1 340 aa20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 TAOK3Q9H2K8 898 aa20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 C1orf115Q9H7X2 142 aa20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 PODXL2Q9NZ53 605 aa20.52■□□□□ 0.88
PACSIN3-210ENST00000533686 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
PACSIN3-210ENST00000533686 RTFDC1Q9BY42 306 aaPredicted RBP20.51■□□□□ 0.87
PACSIN3-210ENST00000533686 COPRSQ9NQ92 184 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms