RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 SALL2Q9Y467 1007 aaPredicted RBP28.58■■■□□ 2.17
BEST1-207ENST00000533521 ZNF521Q96K83 1311 aa28.58■■■□□ 2.17
BEST1-207ENST00000533521 DDNO94850 711 aaPredicted RBP28.57■■■□□ 2.16
BEST1-207ENST00000533521 APLP1P51693 650 aa28.57■■■□□ 2.16
BEST1-207ENST00000533521 LRRC37AA6NMS7 1700 aa28.57■■■□□ 2.16
BEST1-207ENST00000533521 IQCA1LA6NCM1 817 aa28.56■■■□□ 2.16
BEST1-207ENST00000533521 NEXNQ0ZGT2 675 aa28.56■■■□□ 2.16
BEST1-207ENST00000533521 CEP350Q5VT06 3117 aa28.55■■■□□ 2.16
BEST1-207ENST00000533521 CDHR2Q9BYE9 1310 aa28.54■■■□□ 2.16
BEST1-207ENST00000533521 EXOSC9Q06265 439 aaKnown RBP28.54■■■□□ 2.16
BEST1-207ENST00000533521 TAF1P21675 1872 aa28.54■■■□□ 2.16
BEST1-207ENST00000533521 CCER2I3L3R5 266 aa28.53■■■□□ 2.16
BEST1-207ENST00000533521 FLIIQ13045 1269 aa28.53■■■□□ 2.16
BEST1-207ENST00000533521 GPC2Q8N158 579 aa28.53■■■□□ 2.16
BEST1-207ENST00000533521 MPNDQ8N594 471 aa28.53■■■□□ 2.16
BEST1-207ENST00000533521 SPINK5Q9NQ38 1064 aaPredicted RBP28.53■■■□□ 2.16
BEST1-207ENST00000533521 PDE8AO60658 829 aa28.52■■■□□ 2.16
BEST1-207ENST00000533521 IGKV5-2P06315 115 aa28.52■■■□□ 2.16
BEST1-207ENST00000533521 DPP8Q6V1X1 898 aaPredicted RBP28.52■■■□□ 2.16
BEST1-207ENST00000533521 G2E3Q7L622 706 aa28.52■■■□□ 2.16
BEST1-207ENST00000533521 LARGE2Q8N3Y3 721 aa28.52■■■□□ 2.16
BEST1-207ENST00000533521 ZNF541Q9H0D2 1346 aa28.51■■■□□ 2.15
BEST1-207ENST00000533521 TCERG1O14776 1098 aaKnown RBP28.51■■■□□ 2.15
BEST1-207ENST00000533521 EIF6P56537 245 aaKnown RBP28.5■■■□□ 2.15
BEST1-207ENST00000533521 RTL5Q5HYW3 569 aaPredicted RBP28.5■■■□□ 2.15
BEST1-207ENST00000533521 COL4A5P29400 1685 aa28.5■■■□□ 2.15
BEST1-207ENST00000533521 RPS8P62241 208 aaKnown RBP28.49■■■□□ 2.15
BEST1-207ENST00000533521 CCDC152Q4G0S7 254 aa28.49■■■□□ 2.15
BEST1-207ENST00000533521 NEURL1BA8MQ27 555 aa28.48■■■□□ 2.15
BEST1-207ENST00000533521 PPIP5K2O43314 1243 aa28.48■■■□□ 2.15
BEST1-207ENST00000533521 NIM1KQ8IY84 436 aa28.48■■■□□ 2.15
BEST1-207ENST00000533521 CELF1Q92879 486 aaKnown RBP28.48■■■□□ 2.15
BEST1-207ENST00000533521 MYH3P11055 1940 aa28.47■■■□□ 2.15
BEST1-207ENST00000533521 KIAA2012Q0VF49 1180 aa28.47■■■□□ 2.15
BEST1-207ENST00000533521 ZNF428Q96B54 188 aa28.47■■■□□ 2.15
BEST1-207ENST00000533521 TAF1DQ9H5J8 278 aaPredicted RBP28.47■■■□□ 2.15
BEST1-207ENST00000533521 FKBP5Q13451 457 aaPredicted RBP28.46■■■□□ 2.15
BEST1-207ENST00000533521 SLC51AQ86UW1 340 aa28.46■■■□□ 2.15
BEST1-207ENST00000533521 LINS1Q8NG48 757 aa28.46■■■□□ 2.15
BEST1-207ENST00000533521 DNAAF4Q8WXU2 420 aa28.46■■■□□ 2.15
BEST1-207ENST00000533521 HACL1Q9UJ83 578 aa28.46■■■□□ 2.15
BEST1-207ENST00000533521 H7C1W4 665 aa28.45■■■□□ 2.14
BEST1-207ENST00000533521 ZNRF3Q9ULT6 936 aa28.45■■■□□ 2.14
BEST1-207ENST00000533521 DUOX1Q9NRD9 1551 aa28.45■■■□□ 2.14
BEST1-207ENST00000533521 AOC3Q16853 763 aa28.44■■■□□ 2.14
BEST1-207ENST00000533521 RTL9Q8NET4 1388 aa28.44■■■□□ 2.14
BEST1-207ENST00000533521 LTBP1Q14766 1721 aa28.43■■■□□ 2.14
BEST1-207ENST00000533521 E9PSI1 815 aa28.43■■■□□ 2.14
BEST1-207ENST00000533521 GCKRQ14397 625 aa28.43■■■□□ 2.14
BEST1-207ENST00000533521 CWF19L2Q2TBE0 894 aaKnown RBP28.43■■■□□ 2.14
BEST1-207ENST00000533521 CHADLQ6NUI6 762 aa28.43■■■□□ 2.14
BEST1-207ENST00000533521 PNMA8AQ86V59 439 aaPredicted RBP28.43■■■□□ 2.14
BEST1-207ENST00000533521 LDHDQ86WU2 507 aa28.43■■■□□ 2.14
BEST1-207ENST00000533521 CTSWP56202 376 aa28.42■■■□□ 2.14
BEST1-207ENST00000533521 PLA2G12BQ9BX93 195 aa28.42■■■□□ 2.14
BEST1-207ENST00000533521 PODXL2Q9NZ53 605 aa28.42■■■□□ 2.14
BEST1-207ENST00000533521 DNAJC5GQ8N7S2 189 aa28.41■■■□□ 2.14
BEST1-207ENST00000533521 ADAMTSL1Q8N6G6 1762 aa28.4■■■□□ 2.14
BEST1-207ENST00000533521 COL4A1P02462 1669 aa28.4■■■□□ 2.14
BEST1-207ENST00000533521 EPHX2P34913 555 aa28.4■■■□□ 2.14
BEST1-207ENST00000533521 TTLL11Q8NHH1 800 aa28.4■■■□□ 2.14
BEST1-207ENST00000533521 SEC31BQ9NQW1 1179 aa28.4■■■□□ 2.14
BEST1-207ENST00000533521 NSFL1CQ9UNZ2 370 aaKnown RBP28.4■■■□□ 2.14
BEST1-207ENST00000533521 CDC5LQ99459 802 aaKnown RBP28.38■■■□□ 2.13
BEST1-207ENST00000533521 EYA3Q99504 573 aa28.38■■■□□ 2.13
BEST1-207ENST00000533521 LMOD1P29536 600 aaPredicted RBP28.37■■■□□ 2.13
BEST1-207ENST00000533521 CASP7P55210 303 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 GPSM2P81274 684 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 CXCL9Q07325 125 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 SLFN5Q08AF3 891 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 WASHC4Q2M389 1173 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 UBE3BQ7Z3V4 1068 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 ANKRD18AQ8IVF6 992 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 JARID2Q92833 1246 aaPredicted RBP28.37■■■□□ 2.13
BEST1-207ENST00000533521 GJA3Q9Y6H8 435 aa28.37■■■□□ 2.13
BEST1-207ENST00000533521 TNIP1Q15025 636 aa28.36■■■□□ 2.13
BEST1-207ENST00000533521 POLLQ9UGP5 575 aa28.36■■■□□ 2.13
BEST1-207ENST00000533521 SCNN1DP51172 638 aa28.35■■■□□ 2.13
BEST1-207ENST00000533521 BEND3Q5T5X7 828 aa28.35■■■□□ 2.13
BEST1-207ENST00000533521 POTEIP0CG38 1075 aa28.34■■■□□ 2.13
BEST1-207ENST00000533521 POTEJP0CG39 1038 aa28.34■■■□□ 2.13
BEST1-207ENST00000533521 CIAPIN1Q6FI81 312 aa28.34■■■□□ 2.13
BEST1-207ENST00000533521 TBC1D16Q8TBP0 767 aa28.34■■■□□ 2.13
BEST1-207ENST00000533521 C6orf229H3BNL8 230 aa28.33■■■□□ 2.13
BEST1-207ENST00000533521 CSF1RP07333 972 aa28.33■■■□□ 2.13
BEST1-207ENST00000533521 TRMT2AQ8IZ69 625 aaKnown RBP28.33■■■□□ 2.13
BEST1-207ENST00000533521 BSDC1Q9NW68 430 aaPredicted RBP28.33■■■□□ 2.13
BEST1-207ENST00000533521 USP50Q70EL3 339 aaPredicted RBP28.32■■■□□ 2.12
BEST1-207ENST00000533521 GPRC5DQ9NZD1 345 aa28.32■■■□□ 2.12
BEST1-207ENST00000533521 GREM2Q9H772 168 aa28.31■■■□□ 2.12
BEST1-207ENST00000533521 GGA1Q9UJY5 639 aa28.31■■■□□ 2.12
BEST1-207ENST00000533521 XDHP47989 1333 aa28.31■■■□□ 2.12
BEST1-207ENST00000533521 PASKQ96RG2 1323 aa28.3■■■□□ 2.12
BEST1-207ENST00000533521 YDJCA8MPS7 323 aa28.3■■■□□ 2.12
BEST1-207ENST00000533521 ALDH1L1O75891 902 aa28.3■■■□□ 2.12
BEST1-207ENST00000533521 EAPPQ56P03 285 aaPredicted RBP28.3■■■□□ 2.12
BEST1-207ENST00000533521 ZC3H12CQ9C0D7 883 aaKnown RBP28.3■■■□□ 2.12
BEST1-207ENST00000533521 ANKIB1Q9P2G1 1089 aa28.3■■■□□ 2.12
BEST1-207ENST00000533521 F6X3S4 739 aa28.29■■■□□ 2.12
BEST1-207ENST00000533521 ITGBL1O95965 494 aaPredicted RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms