RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 POTEIP0CG38 1075 aa19.88■□□□□ 0.77
CPSF1-211ENST00000533492 POTEJP0CG39 1038 aa19.88■□□□□ 0.77
CPSF1-211ENST00000533492 HSP90B1P14625 803 aaKnown RBP19.88■□□□□ 0.77
CPSF1-211ENST00000533492 EAPPQ56P03 285 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-211ENST00000533492 TMC4Q7Z404 712 aa19.88■□□□□ 0.77
CPSF1-211ENST00000533492 LDHDQ86WU2 507 aa19.88■□□□□ 0.77
CPSF1-211ENST00000533492 KLRG1Q96E93 195 aa19.88■□□□□ 0.77
CPSF1-211ENST00000533492 CLEC11AQ9Y240 323 aa19.88■□□□□ 0.77
CPSF1-211ENST00000533492 IL16Q14005 1332 aa19.87■□□□□ 0.77
CPSF1-211ENST00000533492 EPHX2P34913 555 aa19.87■□□□□ 0.77
CPSF1-211ENST00000533492 SF3B3Q15393 1217 aaKnown RBP19.87■□□□□ 0.77
CPSF1-211ENST00000533492 AOC3Q16853 763 aa19.87■□□□□ 0.77
CPSF1-211ENST00000533492 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-211ENST00000533492 ZBTB38Q8NAP3 1195 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-211ENST00000533492 PNMA8AQ86V59 439 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-211ENST00000533492 CCDC191Q8NCU4 936 aa19.86■□□□□ 0.77
CPSF1-211ENST00000533492 RTFDC1Q9BY42 306 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-211ENST00000533492 LMOD1P29536 600 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-211ENST00000533492 METTL22Q9BUU2 404 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-211ENST00000533492 CWC25Q9NXE8 425 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-211ENST00000533492 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
CPSF1-211ENST00000533492 CELF1Q92879 486 aaKnown RBP19.84■□□□□ 0.77
CPSF1-211ENST00000533492 MAP3K2Q9Y2U5 619 aa19.84■□□□□ 0.77
CPSF1-211ENST00000533492 TAF1P21675 1872 aa19.84■□□□□ 0.77
CPSF1-211ENST00000533492 DDX60Q8IY21 1712 aaKnown RBP19.83■□□□□ 0.77
CPSF1-211ENST00000533492 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
CPSF1-211ENST00000533492 WDR63Q8IWG1 891 aa19.83■□□□□ 0.77
CPSF1-211ENST00000533492 ZNRF3Q9ULT6 936 aa19.83■□□□□ 0.77
CPSF1-211ENST00000533492 COL4A5P29400 1685 aa19.83■□□□□ 0.76
CPSF1-211ENST00000533492 PI4KAP2A4QPH2 592 aa19.82■□□□□ 0.76
CPSF1-211ENST00000533492 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
CPSF1-211ENST00000533492 PCCAP05165 728 aaPredicted RBP19.82■□□□□ 0.76
CPSF1-211ENST00000533492 NEXNQ0ZGT2 675 aa19.82■□□□□ 0.76
CPSF1-211ENST00000533492 PI4KAP1Q8N8J0 262 aa19.82■□□□□ 0.76
CPSF1-211ENST00000533492 NSFL1CQ9UNZ2 370 aaKnown RBP19.82■□□□□ 0.76
CPSF1-211ENST00000533492 RPS8P62241 208 aaKnown RBP19.81■□□□□ 0.76
CPSF1-211ENST00000533492 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
CPSF1-211ENST00000533492 JARID2Q92833 1246 aaPredicted RBP19.81■□□□□ 0.76
CPSF1-211ENST00000533492 PDE8AO60658 829 aa19.8■□□□□ 0.76
CPSF1-211ENST00000533492 CXCL9Q07325 125 aa19.8■□□□□ 0.76
CPSF1-211ENST00000533492 CCDC152Q4G0S7 254 aa19.8■□□□□ 0.76
CPSF1-211ENST00000533492 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
CPSF1-211ENST00000533492 C6orf229H3BNL8 230 aa19.79■□□□□ 0.76
CPSF1-211ENST00000533492 EPS15P42566 896 aa19.79■□□□□ 0.76
CPSF1-211ENST00000533492 WASHC4Q2M389 1173 aa19.79■□□□□ 0.76
CPSF1-211ENST00000533492 JMYQ8N9B5 988 aa19.79■□□□□ 0.76
CPSF1-211ENST00000533492 CREBZFQ9NS37 354 aa19.79■□□□□ 0.76
CPSF1-211ENST00000533492 SCNN1DP51172 638 aa19.78■□□□□ 0.76
CPSF1-211ENST00000533492 TNIP1Q15025 636 aa19.78■□□□□ 0.76
CPSF1-211ENST00000533492 MAP1SQ66K74 1059 aaPredicted RBP19.78■□□□□ 0.76
CPSF1-211ENST00000533492 CIAPIN1Q6FI81 312 aa19.78■□□□□ 0.76
CPSF1-211ENST00000533492 G2E3Q7L622 706 aa19.78■□□□□ 0.76
CPSF1-211ENST00000533492 CNTROBQ8N137 903 aa19.78■□□□□ 0.76
CPSF1-211ENST00000533492 SEC31BQ9NQW1 1179 aa19.78■□□□□ 0.76
CPSF1-211ENST00000533492 RAD17O75943 681 aa19.77■□□□□ 0.76
CPSF1-211ENST00000533492 ITGBL1O95965 494 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-211ENST00000533492 IGKV5-2P06315 115 aa19.77■□□□□ 0.76
CPSF1-211ENST00000533492 GPSM2P81274 684 aa19.77■□□□□ 0.76
CPSF1-211ENST00000533492 EXOSC9Q06265 439 aaKnown RBP19.77■□□□□ 0.76
CPSF1-211ENST00000533492 CCDC85AQ96PX6 553 aaPredicted RBP19.77■□□□□ 0.76
CPSF1-211ENST00000533492 EYA3Q99504 573 aa19.77■□□□□ 0.76
CPSF1-211ENST00000533492 BCL2L13Q9BXK5 485 aa19.77■□□□□ 0.76
CPSF1-211ENST00000533492 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
CPSF1-211ENST00000533492 RIMBP2O15034 1052 aa19.76■□□□□ 0.75
CPSF1-211ENST00000533492 VAMP4O75379 141 aa19.76■□□□□ 0.75
CPSF1-211ENST00000533492 FLIIQ13045 1269 aa19.76■□□□□ 0.75
CPSF1-211ENST00000533492 USP50Q70EL3 339 aaPredicted RBP19.76■□□□□ 0.75
CPSF1-211ENST00000533492 CDHR2Q9BYE9 1310 aa19.76■□□□□ 0.75
CPSF1-211ENST00000533492 FKBP5Q13451 457 aaPredicted RBP19.75■□□□□ 0.75
CPSF1-211ENST00000533492 CWF19L2Q2TBE0 894 aaKnown RBP19.75■□□□□ 0.75
CPSF1-211ENST00000533492 MYH16Q9H6N6 1097 aa19.75■□□□□ 0.75
CPSF1-211ENST00000533492 GPRC5DQ9NZD1 345 aa19.75■□□□□ 0.75
CPSF1-211ENST00000533492 POLLQ9UGP5 575 aa19.75■□□□□ 0.75
CPSF1-211ENST00000533492 TMEM88BA6NKF7 163 aa19.74■□□□□ 0.75
CPSF1-211ENST00000533492 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
CPSF1-211ENST00000533492 GMPSP49915 693 aaPredicted RBP19.74■□□□□ 0.75
CPSF1-211ENST00000533492 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
CPSF1-211ENST00000533492 ZC3H12CQ9C0D7 883 aaKnown RBP19.74■□□□□ 0.75
CPSF1-211ENST00000533492 ADARB2Q9NS39 739 aaKnown RBP19.74■□□□□ 0.75
CPSF1-211ENST00000533492 ANKIB1Q9P2G1 1089 aa19.74■□□□□ 0.75
CPSF1-211ENST00000533492 MKRN1Q9UHC7 482 aaKnown RBP19.74■□□□□ 0.75
CPSF1-211ENST00000533492 LRRC37AA6NMS7 1700 aa19.73■□□□□ 0.75
CPSF1-211ENST00000533492 G3V3G9 751 aa19.73■□□□□ 0.75
CPSF1-211ENST00000533492 DCAF8Q5TAQ9 597 aa19.73■□□□□ 0.75
CPSF1-211ENST00000533492 TBC1D16Q8TBP0 767 aa19.73■□□□□ 0.75
CPSF1-211ENST00000533492 DBNDD1Q9H9R9 158 aa19.73■□□□□ 0.75
CPSF1-211ENST00000533492 YDJCA8MPS7 323 aa19.72■□□□□ 0.75
CPSF1-211ENST00000533492 CTSWP56202 376 aa19.72■□□□□ 0.75
CPSF1-211ENST00000533492 LTBP1Q14766 1721 aa19.72■□□□□ 0.75
CPSF1-211ENST00000533492 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
CPSF1-211ENST00000533492 CDC5LQ99459 802 aaKnown RBP19.72■□□□□ 0.75
CPSF1-211ENST00000533492 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
CPSF1-211ENST00000533492 ADAMTSL1Q8N6G6 1762 aa19.72■□□□□ 0.75
CPSF1-211ENST00000533492 CACNA1FO60840 1977 aa19.72■□□□□ 0.75
CPSF1-211ENST00000533492 DUOX1Q9NRD9 1551 aa19.71■□□□□ 0.75
CPSF1-211ENST00000533492 H7C1W4 665 aa19.71■□□□□ 0.75
CPSF1-211ENST00000533492 UFL1O94874 794 aa19.71■□□□□ 0.75
CPSF1-211ENST00000533492 DOK7Q18PE1 504 aa19.71■□□□□ 0.75
CPSF1-211ENST00000533492 UBE3BQ7Z3V4 1068 aa19.71■□□□□ 0.75
CPSF1-211ENST00000533492 TTLL11Q8NHH1 800 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms