RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FLIIQ13045 1269 aa38.81■■■■□ 3.8
SSSCA1-207ENST00000533115 NEXNQ0ZGT2 675 aa38.8■■■■□ 3.8
SSSCA1-207ENST00000533115 CACNA1FO60840 1977 aa38.79■■■■□ 3.8
SSSCA1-207ENST00000533115 IGKV5-2P06315 115 aa38.79■■■■□ 3.8
SSSCA1-207ENST00000533115 TAF1P21675 1872 aa38.79■■■■□ 3.8
SSSCA1-207ENST00000533115 JDP2Q8WYK2 163 aa38.78■■■■□ 3.8
SSSCA1-207ENST00000533115 FZD9O00144 591 aa38.77■■■■□ 3.8
SSSCA1-207ENST00000533115 TMC4Q7Z404 712 aa38.77■■■■□ 3.8
SSSCA1-207ENST00000533115 JARID2Q92833 1246 aaPredicted RBP38.76■■■■□ 3.8
SSSCA1-207ENST00000533115 ZNF541Q9H0D2 1346 aa38.76■■■■□ 3.8
SSSCA1-207ENST00000533115 FSTL1Q12841 308 aa38.75■■■■□ 3.79
SSSCA1-207ENST00000533115 FKBP5Q13451 457 aaPredicted RBP38.75■■■■□ 3.79
SSSCA1-207ENST00000533115 CELF1Q92879 486 aaKnown RBP38.75■■■■□ 3.79
SSSCA1-207ENST00000533115 DPP8Q6V1X1 898 aaPredicted RBP38.74■■■■□ 3.79
SSSCA1-207ENST00000533115 LARGE2Q8N3Y3 721 aa38.74■■■■□ 3.79
SSSCA1-207ENST00000533115 MPNDQ8N594 471 aa38.74■■■■□ 3.79
SSSCA1-207ENST00000533115 RTFDC1Q9BY42 306 aaPredicted RBP38.74■■■■□ 3.79
SSSCA1-207ENST00000533115 PDE8AO60658 829 aa38.73■■■■□ 3.79
SSSCA1-207ENST00000533115 CWF19L2Q2TBE0 894 aaKnown RBP38.73■■■■□ 3.79
SSSCA1-207ENST00000533115 SUPT20HQ8NEM7 779 aa38.73■■■■□ 3.79
SSSCA1-207ENST00000533115 VPS33BQ9H267 617 aa38.73■■■■□ 3.79
SSSCA1-207ENST00000533115 COL4A5P29400 1685 aa38.73■■■■□ 3.79
SSSCA1-207ENST00000533115 CDHR2Q9BYE9 1310 aa38.72■■■■□ 3.79
SSSCA1-207ENST00000533115 NEURL1BA8MQ27 555 aa38.72■■■■□ 3.79
SSSCA1-207ENST00000533115 L3MBTL3Q96JM7 780 aaPredicted RBP38.72■■■■□ 3.79
SSSCA1-207ENST00000533115 SMC1BQ8NDV3 1235 aa38.71■■■■□ 3.79
SSSCA1-207ENST00000533115 PPIP5K2O43314 1243 aa38.7■■■■□ 3.79
SSSCA1-207ENST00000533115 DNAAF4Q8WXU2 420 aa38.7■■■■□ 3.79
SSSCA1-207ENST00000533115 CCDC152Q4G0S7 254 aa38.69■■■■□ 3.78
SSSCA1-207ENST00000533115 LRRC37AA6NMS7 1700 aa38.69■■■■□ 3.78
SSSCA1-207ENST00000533115 EIF6P56537 245 aaKnown RBP38.68■■■■□ 3.78
SSSCA1-207ENST00000533115 AOC3Q16853 763 aa38.68■■■■□ 3.78
SSSCA1-207ENST00000533115 CEP350Q5VT06 3117 aa38.68■■■■□ 3.78
SSSCA1-207ENST00000533115 COL4A1P02462 1669 aa38.68■■■■□ 3.78
SSSCA1-207ENST00000533115 IQCA1LA6NCM1 817 aa38.67■■■■□ 3.78
SSSCA1-207ENST00000533115 RPS8P62241 208 aaKnown RBP38.67■■■■□ 3.78
SSSCA1-207ENST00000533115 NIM1KQ8IY84 436 aa38.67■■■■□ 3.78
SSSCA1-207ENST00000533115 E9PSI1 815 aa38.66■■■■□ 3.78
SSSCA1-207ENST00000533115 GPC2Q8N158 579 aa38.66■■■■□ 3.78
SSSCA1-207ENST00000533115 SEC31BQ9NQW1 1179 aa38.66■■■■□ 3.78
SSSCA1-207ENST00000533115 SCN4AP35499 1836 aa38.64■■■■□ 3.78
SSSCA1-207ENST00000533115 APLP1P51693 650 aa38.64■■■■□ 3.78
SSSCA1-207ENST00000533115 LINS1Q8NG48 757 aa38.64■■■■□ 3.78
SSSCA1-207ENST00000533115 H7C1W4 665 aa38.63■■■■□ 3.77
SSSCA1-207ENST00000533115 GCKRQ14397 625 aa38.63■■■■□ 3.77
SSSCA1-207ENST00000533115 CCDC85AQ96PX6 553 aaPredicted RBP38.63■■■■□ 3.77
SSSCA1-207ENST00000533115 CTSWP56202 376 aa38.62■■■■□ 3.77
SSSCA1-207ENST00000533115 KIAA2012Q0VF49 1180 aa38.61■■■■□ 3.77
SSSCA1-207ENST00000533115 UBE3BQ7Z3V4 1068 aa38.61■■■■□ 3.77
SSSCA1-207ENST00000533115 NSFL1CQ9UNZ2 370 aaKnown RBP38.61■■■■□ 3.77
SSSCA1-207ENST00000533115 DUOX1Q9NRD9 1551 aa38.61■■■■□ 3.77
SSSCA1-207ENST00000533115 SLFN5Q08AF3 891 aa38.6■■■■□ 3.77
SSSCA1-207ENST00000533115 TAF1DQ9H5J8 278 aaPredicted RBP38.6■■■■□ 3.77
SSSCA1-207ENST00000533115 HACL1Q9UJ83 578 aa38.6■■■■□ 3.77
SSSCA1-207ENST00000533115 GJA3Q9Y6H8 435 aa38.6■■■■□ 3.77
SSSCA1-207ENST00000533115 F6X3S4 739 aa38.59■■■■□ 3.77
SSSCA1-207ENST00000533115 GPSM2P81274 684 aa38.59■■■■□ 3.77
SSSCA1-207ENST00000533115 TTLL11Q8NHH1 800 aa38.58■■■■□ 3.77
SSSCA1-207ENST00000533115 ZNRF3Q9ULT6 936 aa38.58■■■■□ 3.77
SSSCA1-207ENST00000533115 MYH3P11055 1940 aa38.56■■■■□ 3.76
SSSCA1-207ENST00000533115 POTEIP0CG38 1075 aa38.55■■■■□ 3.76
SSSCA1-207ENST00000533115 POTEJP0CG39 1038 aa38.55■■■■□ 3.76
SSSCA1-207ENST00000533115 BEND3Q5T5X7 828 aa38.55■■■■□ 3.76
SSSCA1-207ENST00000533115 ANKRD18AQ8IVF6 992 aa38.55■■■■□ 3.76
SSSCA1-207ENST00000533115 CASP7P55210 303 aa38.54■■■■□ 3.76
SSSCA1-207ENST00000533115 CHADLQ6NUI6 762 aa38.54■■■■□ 3.76
SSSCA1-207ENST00000533115 CDCA7LQ96GN5 454 aa38.54■■■■□ 3.76
SSSCA1-207ENST00000533115 PLA2G12BQ9BX93 195 aa38.54■■■■□ 3.76
SSSCA1-207ENST00000533115 POLLQ9UGP5 575 aa38.54■■■■□ 3.76
SSSCA1-207ENST00000533115 C6orf229H3BNL8 230 aa38.53■■■■□ 3.76
SSSCA1-207ENST00000533115 EPHX2P34913 555 aa38.53■■■■□ 3.76
SSSCA1-207ENST00000533115 WASHC4Q2M389 1173 aa38.53■■■■□ 3.76
SSSCA1-207ENST00000533115 DIEXFQ68CQ4 756 aaKnown RBP38.53■■■■□ 3.76
SSSCA1-207ENST00000533115 CDC5LQ99459 802 aaKnown RBP38.53■■■■□ 3.76
SSSCA1-207ENST00000533115 LTBP1Q14766 1721 aa38.52■■■■□ 3.76
SSSCA1-207ENST00000533115 GREM2Q9H772 168 aa38.52■■■■□ 3.76
SSSCA1-207ENST00000533115 PODXL2Q9NZ53 605 aa38.52■■■■□ 3.76
SSSCA1-207ENST00000533115 RTL9Q8NET4 1388 aa38.52■■■■□ 3.76
SSSCA1-207ENST00000533115 CXCL9Q07325 125 aa38.51■■■■□ 3.76
SSSCA1-207ENST00000533115 LDHDQ86WU2 507 aa38.51■■■■□ 3.76
SSSCA1-207ENST00000533115 TBC1D16Q8TBP0 767 aa38.5■■■■□ 3.75
SSSCA1-207ENST00000533115 EYA3Q99504 573 aa38.5■■■■□ 3.75
SSSCA1-207ENST00000533115 LMOD1P29536 600 aaPredicted RBP38.49■■■■□ 3.75
SSSCA1-207ENST00000533115 EAPPQ56P03 285 aaPredicted RBP38.49■■■■□ 3.75
SSSCA1-207ENST00000533115 MRPL50Q8N5N7 158 aaKnown RBP38.49■■■■□ 3.75
SSSCA1-207ENST00000533115 ANKIB1Q9P2G1 1089 aa38.49■■■■□ 3.75
SSSCA1-207ENST00000533115 SCNN1DP51172 638 aa38.48■■■■□ 3.75
SSSCA1-207ENST00000533115 PNMA8AQ86V59 439 aaPredicted RBP38.48■■■■□ 3.75
SSSCA1-207ENST00000533115 TRMT2AQ8IZ69 625 aaKnown RBP38.48■■■■□ 3.75
SSSCA1-207ENST00000533115 RIMBP2O15034 1052 aa38.47■■■■□ 3.75
SSSCA1-207ENST00000533115 CIAPIN1Q6FI81 312 aa38.47■■■■□ 3.75
SSSCA1-207ENST00000533115 MIER1Q8N108 512 aa38.46■■■■□ 3.75
SSSCA1-207ENST00000533115 YDJCA8MPS7 323 aa38.45■■■■□ 3.75
SSSCA1-207ENST00000533115 CSF1RP07333 972 aa38.45■■■■□ 3.75
SSSCA1-207ENST00000533115 SLC4A10Q6U841 1118 aa38.45■■■■□ 3.75
SSSCA1-207ENST00000533115 BSDC1Q9NW68 430 aaPredicted RBP38.45■■■■□ 3.75
SSSCA1-207ENST00000533115 GGA1Q9UJY5 639 aa38.45■■■■□ 3.75
SSSCA1-207ENST00000533115 RAD17O75943 681 aa38.44■■■■□ 3.74
SSSCA1-207ENST00000533115 UFL1O94874 794 aa38.44■■■■□ 3.74
SSSCA1-207ENST00000533115 HTRA3P83110 453 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms