RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 HSPA6P17066 643 aa21.29■■□□□ 1
PKP3-209ENST00000533069 SUPT20HQ8NEM7 779 aa21.29■■□□□ 1
PKP3-209ENST00000533069 VPS33BQ9H267 617 aa21.29■■□□□ 1
PKP3-209ENST00000533069 WDR90Q96KV7 1748 aa21.29■■□□□ 1
PKP3-209ENST00000533069 IGKV5-2P06315 115 aa21.28■■□□□ 1
PKP3-209ENST00000533069 FSTL1Q12841 308 aa21.28■■□□□ 1
PKP3-209ENST00000533069 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
PKP3-209ENST00000533069 CDHR2Q9BYE9 1310 aa21.28■■□□□ 1
PKP3-209ENST00000533069 CCDC88AQ3V6T2 1871 aa21.27■■□□□ 1
PKP3-209ENST00000533069 FZD9O00144 591 aa21.27■■□□□ 1
PKP3-209ENST00000533069 DPP8Q6V1X1 898 aaPredicted RBP21.27■■□□□ 1
PKP3-209ENST00000533069 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
PKP3-209ENST00000533069 NEURL1BA8MQ27 555 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 E9PSI1 815 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 PDE8AO60658 829 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 DDNO94850 711 aaPredicted RBP21.26■□□□□ 0.99
PKP3-209ENST00000533069 SLC51AQ86UW1 340 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 LARGE2Q8N3Y3 721 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 MPNDQ8N594 471 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 L3MBTL3Q96JM7 780 aaPredicted RBP21.26■□□□□ 0.99
PKP3-209ENST00000533069 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
PKP3-209ENST00000533069 IQCA1LA6NCM1 817 aa21.25■□□□□ 0.99
PKP3-209ENST00000533069 POTECB2RU33 542 aa21.25■□□□□ 0.99
PKP3-209ENST00000533069 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
PKP3-209ENST00000533069 SMC1BQ8NDV3 1235 aa21.25■□□□□ 0.99
PKP3-209ENST00000533069 DNAAF4Q8WXU2 420 aa21.25■□□□□ 0.99
PKP3-209ENST00000533069 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
PKP3-209ENST00000533069 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
PKP3-209ENST00000533069 PPIP5K2O43314 1243 aa21.23■□□□□ 0.99
PKP3-209ENST00000533069 EIF6P56537 245 aaKnown RBP21.23■□□□□ 0.99
PKP3-209ENST00000533069 NIM1KQ8IY84 436 aa21.23■□□□□ 0.99
PKP3-209ENST00000533069 GPC2Q8N158 579 aa21.23■□□□□ 0.99
PKP3-209ENST00000533069 LINS1Q8NG48 757 aa21.23■□□□□ 0.99
PKP3-209ENST00000533069 LRRC37AA6NMS7 1700 aa21.22■□□□□ 0.99
PKP3-209ENST00000533069 RPS8P62241 208 aaKnown RBP21.22■□□□□ 0.99
PKP3-209ENST00000533069 GCKRQ14397 625 aa21.22■□□□□ 0.99
PKP3-209ENST00000533069 COL4A5P29400 1685 aa21.21■□□□□ 0.99
PKP3-209ENST00000533069 APLP1P51693 650 aa21.21■□□□□ 0.99
PKP3-209ENST00000533069 CTSWP56202 376 aa21.21■□□□□ 0.99
PKP3-209ENST00000533069 AOC3Q16853 763 aa21.21■□□□□ 0.99
PKP3-209ENST00000533069 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
PKP3-209ENST00000533069 H7C1W4 665 aa21.2■□□□□ 0.98
PKP3-209ENST00000533069 KIAA2012Q0VF49 1180 aa21.2■□□□□ 0.98
PKP3-209ENST00000533069 SLFN5Q08AF3 891 aa21.19■□□□□ 0.98
PKP3-209ENST00000533069 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
PKP3-209ENST00000533069 SEC31BQ9NQW1 1179 aa21.19■□□□□ 0.98
PKP3-209ENST00000533069 RTL9Q8NET4 1388 aa21.19■□□□□ 0.98
PKP3-209ENST00000533069 CDC5LQ99459 802 aaKnown RBP21.18■□□□□ 0.98
PKP3-209ENST00000533069 HACL1Q9UJ83 578 aa21.18■□□□□ 0.98
PKP3-209ENST00000533069 ZNRF3Q9ULT6 936 aa21.18■□□□□ 0.98
PKP3-209ENST00000533069 NSFL1CQ9UNZ2 370 aaKnown RBP21.18■□□□□ 0.98
PKP3-209ENST00000533069 DUOX1Q9NRD9 1551 aa21.18■□□□□ 0.98
PKP3-209ENST00000533069 TTLL11Q8NHH1 800 aa21.17■□□□□ 0.98
PKP3-209ENST00000533069 PLA2G12BQ9BX93 195 aa21.17■□□□□ 0.98
PKP3-209ENST00000533069 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
PKP3-209ENST00000533069 CACNA1FO60840 1977 aa21.17■□□□□ 0.98
PKP3-209ENST00000533069 COL4A1P02462 1669 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 GPSM2P81274 684 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 BEND3Q5T5X7 828 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 ANKRD18AQ8IVF6 992 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 CCDC85AQ96PX6 553 aaPredicted RBP21.16■□□□□ 0.98
PKP3-209ENST00000533069 EYA3Q99504 573 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 GJA3Q9Y6H8 435 aa21.16■□□□□ 0.98
PKP3-209ENST00000533069 CEP350Q5VT06 3117 aa21.15■□□□□ 0.98
PKP3-209ENST00000533069 F6X3S4 739 aa21.15■□□□□ 0.98
PKP3-209ENST00000533069 CASP7P55210 303 aa21.15■□□□□ 0.98
PKP3-209ENST00000533069 SCN4AP35499 1836 aa21.15■□□□□ 0.98
PKP3-209ENST00000533069 C6orf229H3BNL8 230 aa21.14■□□□□ 0.97
PKP3-209ENST00000533069 LMOD1P29536 600 aaPredicted RBP21.14■□□□□ 0.97
PKP3-209ENST00000533069 EPHX2P34913 555 aa21.14■□□□□ 0.97
PKP3-209ENST00000533069 WASHC4Q2M389 1173 aa21.14■□□□□ 0.97
PKP3-209ENST00000533069 CHADLQ6NUI6 762 aa21.14■□□□□ 0.97
PKP3-209ENST00000533069 PNMA8AQ86V59 439 aaPredicted RBP21.14■□□□□ 0.97
PKP3-209ENST00000533069 LDHDQ86WU2 507 aa21.14■□□□□ 0.97
PKP3-209ENST00000533069 TRMT2AQ8IZ69 625 aaKnown RBP21.13■□□□□ 0.97
PKP3-209ENST00000533069 TBC1D16Q8TBP0 767 aa21.13■□□□□ 0.97
PKP3-209ENST00000533069 CDCA7LQ96GN5 454 aa21.13■□□□□ 0.97
PKP3-209ENST00000533069 GREM2Q9H772 168 aa21.13■□□□□ 0.97
PKP3-209ENST00000533069 ANKIB1Q9P2G1 1089 aa21.13■□□□□ 0.97
PKP3-209ENST00000533069 POLLQ9UGP5 575 aa21.13■□□□□ 0.97
PKP3-209ENST00000533069 PTPRCP08575 1304 aa21.12■□□□□ 0.97
PKP3-209ENST00000533069 TAF1P21675 1872 aa21.12■□□□□ 0.97
PKP3-209ENST00000533069 ALDH1L1O75891 902 aa21.12■□□□□ 0.97
PKP3-209ENST00000533069 CT47B1P0C2W7 299 aaPredicted RBP21.12■□□□□ 0.97
PKP3-209ENST00000533069 CXCL9Q07325 125 aa21.12■□□□□ 0.97
PKP3-209ENST00000533069 TNIP1Q15025 636 aa21.12■□□□□ 0.97
PKP3-209ENST00000533069 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
PKP3-209ENST00000533069 LTBP1Q14766 1721 aa21.12■□□□□ 0.97
PKP3-209ENST00000533069 XDHP47989 1333 aa21.11■□□□□ 0.97
PKP3-209ENST00000533069 SCNN1DP51172 638 aa21.11■□□□□ 0.97
PKP3-209ENST00000533069 ALDH1L2Q3SY69 923 aa21.11■□□□□ 0.97
PKP3-209ENST00000533069 CIAPIN1Q6FI81 312 aa21.11■□□□□ 0.97
PKP3-209ENST00000533069 BSDC1Q9NW68 430 aaPredicted RBP21.11■□□□□ 0.97
PKP3-209ENST00000533069 GGA1Q9UJY5 639 aa21.11■□□□□ 0.97
PKP3-209ENST00000533069 GRM8O00222 908 aa21.1■□□□□ 0.97
PKP3-209ENST00000533069 UFL1O94874 794 aa21.1■□□□□ 0.97
PKP3-209ENST00000533069 CSF1RP07333 972 aa21.1■□□□□ 0.97
PKP3-209ENST00000533069 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
PKP3-209ENST00000533069 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms